| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yusP [H]
Identifier: 222526618
GI number: 222526618
Start: 4216288
End: 4217802
Strand: Reverse
Name: yusP [H]
Synonym: Chy400_3386
Alternate gene names: 222526618
Gene position: 4217802-4216288 (Counterclockwise)
Preceding gene: 222526620
Following gene: 222526615
Centisome position: 80.05
GC content: 58.68
Gene sequence:
>1515_bases GTGAGTCGCCAACACACTATCCTGATCACGATGGGCGTGATGATGAGCCTGTTTATGGCTTCGATGGAGTCGACCGTTAT CGCTACAGCCATGCCGGGCATTGTGCGCGATTTGGGTGACATTGAGAGTTTTAGCTGGGTTTTTGCCATTTATATGCTGA CCAGCACGACCGCCGGCCCTATTTTCGGGCGTCTGTCAGACCTCTTCGGACGCAGGCCGGTCTATATGGTAGCAATCGCT ATCTTTAGCCTGGGTTCACTCTTGTGTGGGCTGGCAACCACAATGCCTATGCTAATTGCAGCACGCGCACTCCAGGGGTT GGGCGCCGGCGGACTGCTCCCACTGGCCTTTATCATCGTCGGTGATATTTTCACGCTTGACCAGCGAGCAAAGGTGCAGG GGCTTTTTTCAGGGGTGTGGGGCATCAGCTCGGTGATTGGCCCACTGATCGGCGGGTTTCTGGTTGATCAGATTTCATGG CACTGGGTGTTTTGGATTAACCTCCCTCCGGCGGCTATCGCTGCGGCACTGGTCTGGATAGCGTGGCGTGATCCGGTACG TGCAAACGCCAAACGACCACCCATCGATATTGCCGGTGCATTGTTGTTGAGCGTCGGAATTATTCTACTGCTGCTCGGAC TCGATCAGCCAACAACGCCCAGCGGCATTCTTATGTTAAGCGCTGCTGTAGCAACGCTGGCCTTGCTGGTGATGGTTGAA CTGCGGGCACCGGCACCAATTCTCCCGTTTCACCTGTTGCGTGACCGCACATTCGCGATTGCCTGTCTCCATGGCATTCT GGCCGGTGGTGTGCTGTTCGGCAGCATGAACTACGTGCCACTCTTCGCGCAGGGGGTGCTGGGCACAAGCGCAACCGAGG CCGGCACCACCCTGACGCCACTGATGCTGGGATGGGTCTTTACCAGCATTATCGGTGGCCGGCTGTTGTTGCGCATGAGC TATCGCACGCTCACGATTGGCGGGATGGTCATGTTTGTAGCGGGTGCCATCCTCATGGCCCGGCTACGCCCCGATATGAG TCGGCTTGAACTGGCCATTGCGCTGGGGCTGATGGGGATTGGCATGGGTGCCAGCATTCCCTCGTTTTTGATAGCAGTGC AGAGCACGGTGGCCCGCAACGTGTTGGGAGCGGCAACCGCGAGTTTGCAATTTTCGCGCACGATTGGCGGGACGATTGGG GTGGCTGTGCTGGGCACCTTACTGACGAACCGGTTGAGTGCAGAGCTGGCAGCACGCGGCTTACAAGCCGATGCCGTTCC GGTTGAAGCACTGATCGGCGAGGGAGCAACCGCGATGACCCTTGCCGGCGAGCCACGGCTGGCACTGGCGGCTGCGCTGA CCGCAGTCTTTGCCGCGCCGCTGGTGTTTGCATTGCTGGCACTGGCAGTGACATTTCTGGCCCCTTCGCACAGCCCTGAT GATCTGCGCCGTAAGCGTGAACAGCGCGAAGAGGTAACTACGGCGAAAGAAGTTGCGCCACAGCAGGCGGGGTAG
Upstream 100 bases:
>100_bases CCGGCCAACCAACCCTCTTATAAAGACAATTGGCGGCGATGGAGACGCAAATAACCCCCGTGCAAGCAGGTCAACCACAC ACGTATAACAAGGAGCCTTT
Downstream 100 bases:
>100_bases GGGGAGGAGGTAGGAGGTAGGAGATAGGAGGTAGGAGATAGGAGATAGAAGATAGGAGATAGAAGATTAGGAGATAGGAG ATAAGAGATAGGAAGTTCAA
Product: EmrB/QacA subfamily drug resistance transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 504; Mature: 503
Protein sequence:
>504_residues MSRQHTILITMGVMMSLFMASMESTVIATAMPGIVRDLGDIESFSWVFAIYMLTSTTAGPIFGRLSDLFGRRPVYMVAIA IFSLGSLLCGLATTMPMLIAARALQGLGAGGLLPLAFIIVGDIFTLDQRAKVQGLFSGVWGISSVIGPLIGGFLVDQISW HWVFWINLPPAAIAAALVWIAWRDPVRANAKRPPIDIAGALLLSVGIILLLLGLDQPTTPSGILMLSAAVATLALLVMVE LRAPAPILPFHLLRDRTFAIACLHGILAGGVLFGSMNYVPLFAQGVLGTSATEAGTTLTPLMLGWVFTSIIGGRLLLRMS YRTLTIGGMVMFVAGAILMARLRPDMSRLELAIALGLMGIGMGASIPSFLIAVQSTVARNVLGAATASLQFSRTIGGTIG VAVLGTLLTNRLSAELAARGLQADAVPVEALIGEGATAMTLAGEPRLALAAALTAVFAAPLVFALLALAVTFLAPSHSPD DLRRKREQREEVTTAKEVAPQQAG
Sequences:
>Translated_504_residues MSRQHTILITMGVMMSLFMASMESTVIATAMPGIVRDLGDIESFSWVFAIYMLTSTTAGPIFGRLSDLFGRRPVYMVAIA IFSLGSLLCGLATTMPMLIAARALQGLGAGGLLPLAFIIVGDIFTLDQRAKVQGLFSGVWGISSVIGPLIGGFLVDQISW HWVFWINLPPAAIAAALVWIAWRDPVRANAKRPPIDIAGALLLSVGIILLLLGLDQPTTPSGILMLSAAVATLALLVMVE LRAPAPILPFHLLRDRTFAIACLHGILAGGVLFGSMNYVPLFAQGVLGTSATEAGTTLTPLMLGWVFTSIIGGRLLLRMS YRTLTIGGMVMFVAGAILMARLRPDMSRLELAIALGLMGIGMGASIPSFLIAVQSTVARNVLGAATASLQFSRTIGGTIG VAVLGTLLTNRLSAELAARGLQADAVPVEALIGEGATAMTLAGEPRLALAAALTAVFAAPLVFALLALAVTFLAPSHSPD DLRRKREQREEVTTAKEVAPQQAG >Mature_503_residues SRQHTILITMGVMMSLFMASMESTVIATAMPGIVRDLGDIESFSWVFAIYMLTSTTAGPIFGRLSDLFGRRPVYMVAIAI FSLGSLLCGLATTMPMLIAARALQGLGAGGLLPLAFIIVGDIFTLDQRAKVQGLFSGVWGISSVIGPLIGGFLVDQISWH WVFWINLPPAAIAAALVWIAWRDPVRANAKRPPIDIAGALLLSVGIILLLLGLDQPTTPSGILMLSAAVATLALLVMVEL RAPAPILPFHLLRDRTFAIACLHGILAGGVLFGSMNYVPLFAQGVLGTSATEAGTTLTPLMLGWVFTSIIGGRLLLRMSY RTLTIGGMVMFVAGAILMARLRPDMSRLELAIALGLMGIGMGASIPSFLIAVQSTVARNVLGAATASLQFSRTIGGTIGV AVLGTLLTNRLSAELAARGLQADAVPVEALIGEGATAMTLAGEPRLALAAALTAVFAAPLVFALLALAVTFLAPSHSPDD LRRKREQREEVTTAKEVAPQQAG
Specific function: Translocase That Confers Resistance To Substances Of High Hydrophobicity. [C]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI1789042, Length=419, Percent_Identity=27.6849642004773, Blast_Score=138, Evalue=1e-33, Organism=Escherichia coli, GI1790195, Length=398, Percent_Identity=27.1356783919598, Blast_Score=125, Evalue=6e-30, Organism=Escherichia coli, GI87081983, Length=403, Percent_Identity=25.3101736972705, Blast_Score=116, Evalue=4e-27, Organism=Escherichia coli, GI1788392, Length=317, Percent_Identity=31.8611987381703, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1788710, Length=414, Percent_Identity=26.3285024154589, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1790146, Length=136, Percent_Identity=34.5588235294118, Blast_Score=80, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6323735, Length=441, Percent_Identity=25.8503401360544, Blast_Score=124, Evalue=5e-29, Organism=Saccharomyces cerevisiae, GI6322958, Length=470, Percent_Identity=25.531914893617, Blast_Score=105, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6319770, Length=380, Percent_Identity=28.1578947368421, Blast_Score=104, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6321663, Length=149, Percent_Identity=31.5436241610738, Blast_Score=96, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6325455, Length=139, Percent_Identity=31.6546762589928, Blast_Score=84, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6324954, Length=383, Percent_Identity=25.5874673629243, Blast_Score=82, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6323520, Length=344, Percent_Identity=26.7441860465116, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 52890; Mature: 52759
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRQHTILITMGVMMSLFMASMESTVIATAMPGIVRDLGDIESFSWVFAIYMLTSTTAGP CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH IFGRLSDLFGRRPVYMVAIAIFSLGSLLCGLATTMPMLIAARALQGLGAGGLLPLAFIIV HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH GDIFTLDQRAKVQGLFSGVWGISSVIGPLIGGFLVDQISWHWVFWINLPPAAIAAALVWI HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHH AWRDPVRANAKRPPIDIAGALLLSVGIILLLLGLDQPTTPSGILMLSAAVATLALLVMVE HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH LRAPAPILPFHLLRDRTFAIACLHGILAGGVLFGSMNYVPLFAQGVLGTSATEAGTTLTP HCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHH LMLGWVFTSIIGGRLLLRMSYRTLTIGGMVMFVAGAILMARLRPDMSRLELAIALGLMGI HHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC GMGASIPSFLIAVQSTVARNVLGAATASLQFSRTIGGTIGVAVLGTLLTNRLSAELAARG CCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHCC LQADAVPVEALIGEGATAMTLAGEPRLALAAALTAVFAAPLVFALLALAVTFLAPSHSPD CCCCCCHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH DLRRKREQREEVTTAKEVAPQQAG HHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SRQHTILITMGVMMSLFMASMESTVIATAMPGIVRDLGDIESFSWVFAIYMLTSTTAGP CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH IFGRLSDLFGRRPVYMVAIAIFSLGSLLCGLATTMPMLIAARALQGLGAGGLLPLAFIIV HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH GDIFTLDQRAKVQGLFSGVWGISSVIGPLIGGFLVDQISWHWVFWINLPPAAIAAALVWI HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHH AWRDPVRANAKRPPIDIAGALLLSVGIILLLLGLDQPTTPSGILMLSAAVATLALLVMVE HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH LRAPAPILPFHLLRDRTFAIACLHGILAGGVLFGSMNYVPLFAQGVLGTSATEAGTTLTP HCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHH LMLGWVFTSIIGGRLLLRMSYRTLTIGGMVMFVAGAILMARLRPDMSRLELAIALGLMGI HHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC GMGASIPSFLIAVQSTVARNVLGAATASLQFSRTIGGTIGVAVLGTLLTNRLSAELAARG CCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHCC LQADAVPVEALIGEGATAMTLAGEPRLALAAALTAVFAAPLVFALLALAVTFLAPSHSPD CCCCCCHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH DLRRKREQREEVTTAKEVAPQQAG HHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]