| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526615
Identifier: 222526615
GI number: 222526615
Start: 4214666
End: 4215475
Strand: Reverse
Name: 222526615
Synonym: Chy400_3383
Alternate gene names: NA
Gene position: 4215475-4214666 (Counterclockwise)
Preceding gene: 222526618
Following gene: 222526614
Centisome position: 80.01
GC content: 63.95
Gene sequence:
>810_bases GTGTCGTATCATGCACGGTACGACGATCCCGACATCGGGCAGTTTCTCTCTGCCGACACCATCATCCCCGGCAGCCCGCC GCTCACCGTCTGGCCGAGCGATGCAACGGCGCAGGGGATGTGGCGCAGCGCCGGCAGCGGCCCGGTCAATCCGCAGGACC TGAACCGCTATGCGTATGCGCTGAACAATCCGCTGAAATACACCGACCCGACGGGGCATCTGCCGCTGCTGCCGGTGCTC ATCGCTGGCGGGCTGGCGCTGCTAAAGGCGATTGACGACGGCTGGACGGCGTGGGATGCCTTCCAAGCCACCCGCACGCT GGCCGACCCGGAGGCTCCTGCTGAGGAGAAGCGCGCGGCGACCGCCAACCTGGCCCTGACCGCCGCGCTGGAAGCGGCCG AACCTGATGACATGCTGCCGGTCGGCTTGCCCCGCGATGACTTGCTTCGGGTTGGGATCATCGGGGGGAGCAAGGGGGCG GATGCGGGGCGGGTGGTGGCGCGGGGTGGGGCGGGGGCAGATGTCGTTGGCGGCACGCCTCCTCGATGGCCCCATACGCC AGAGGAGATGGATGATTTCCTCGGTCTGCAGGGAGAACGCATTCCAGATACAGCAGGGACGCCTGGAAGGAGCAAAGTGG TATGGAAGCCATCCGATACTGTGAAAATCACCTATGAACAGCATCCCTATCACACGACTGCGCCTGCTTACCATCGAGGG CCGCACTGGCATCTTGATACACCAGGCAAACCTCATGTCCGATATCTTCCGGGTGAGGATATACCGGGATTGTGGGTGGA GGTTCAATGA
Upstream 100 bases:
>100_bases GGGGTGCAGTACGACGACCCGTGGGCCGCTGTGTGCAGCGGGAGGCATCCGTCCGACCACGTTCACCGCCATCGGACAGC ACCTGGACGCCAGCGCATTG
Downstream 100 bases:
>100_bases CTTCGCAAGATATCGCAGTGATCCGTTTTACGGATGTCGATTCCCAAGAGGAAGCCGTGGTCCTCGTGCGTGTGGTGGGG GCGCAGATTGGCCTCTGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MSYHARYDDPDIGQFLSADTIIPGSPPLTVWPSDATAQGMWRSAGSGPVNPQDLNRYAYALNNPLKYTDPTGHLPLLPVL IAGGLALLKAIDDGWTAWDAFQATRTLADPEAPAEEKRAATANLALTAALEAAEPDDMLPVGLPRDDLLRVGIIGGSKGA DAGRVVARGGAGADVVGGTPPRWPHTPEEMDDFLGLQGERIPDTAGTPGRSKVVWKPSDTVKITYEQHPYHTTAPAYHRG PHWHLDTPGKPHVRYLPGEDIPGLWVEVQ
Sequences:
>Translated_269_residues MSYHARYDDPDIGQFLSADTIIPGSPPLTVWPSDATAQGMWRSAGSGPVNPQDLNRYAYALNNPLKYTDPTGHLPLLPVL IAGGLALLKAIDDGWTAWDAFQATRTLADPEAPAEEKRAATANLALTAALEAAEPDDMLPVGLPRDDLLRVGIIGGSKGA DAGRVVARGGAGADVVGGTPPRWPHTPEEMDDFLGLQGERIPDTAGTPGRSKVVWKPSDTVKITYEQHPYHTTAPAYHRG PHWHLDTPGKPHVRYLPGEDIPGLWVEVQ >Mature_268_residues SYHARYDDPDIGQFLSADTIIPGSPPLTVWPSDATAQGMWRSAGSGPVNPQDLNRYAYALNNPLKYTDPTGHLPLLPVLI AGGLALLKAIDDGWTAWDAFQATRTLADPEAPAEEKRAATANLALTAALEAAEPDDMLPVGLPRDDLLRVGIIGGSKGAD AGRVVARGGAGADVVGGTPPRWPHTPEEMDDFLGLQGERIPDTAGTPGRSKVVWKPSDTVKITYEQHPYHTTAPAYHRGP HWHLDTPGKPHVRYLPGEDIPGLWVEVQ
Specific function: Unknown
COG id: COG3209
COG function: function code M; Rhs family protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28862; Mature: 28730
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYHARYDDPDIGQFLSADTIIPGSPPLTVWPSDATAQGMWRSAGSGPVNPQDLNRYAYA CCCCCCCCCCCHHHHHCCCEECCCCCCEEECCCCCCHHHHHHCCCCCCCCHHHHHHHHHH LNNPLKYTDPTGHLPLLPVLIAGGLALLKAIDDGWTAWDAFQATRTLADPEAPAEEKRAA HCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHH TANLALTAALEAAEPDDMLPVGLPRDDLLRVGIIGGSKGADAGRVVARGGAGADVVGGTP HHHEEEEEEECCCCCCCCCCCCCCHHHEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCC PRWPHTPEEMDDFLGLQGERIPDTAGTPGRSKVVWKPSDTVKITYEQHPYHTTAPAYHRG CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCC PHWHLDTPGKPHVRYLPGEDIPGLWVEVQ CCEECCCCCCCCEEECCCCCCCCCEEEEC >Mature Secondary Structure SYHARYDDPDIGQFLSADTIIPGSPPLTVWPSDATAQGMWRSAGSGPVNPQDLNRYAYA CCCCCCCCCCHHHHHCCCEECCCCCCEEECCCCCCHHHHHHCCCCCCCCHHHHHHHHHH LNNPLKYTDPTGHLPLLPVLIAGGLALLKAIDDGWTAWDAFQATRTLADPEAPAEEKRAA HCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHH TANLALTAALEAAEPDDMLPVGLPRDDLLRVGIIGGSKGADAGRVVARGGAGADVVGGTP HHHEEEEEEECCCCCCCCCCCCCCHHHEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCC PRWPHTPEEMDDFLGLQGERIPDTAGTPGRSKVVWKPSDTVKITYEQHPYHTTAPAYHRG CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCC PHWHLDTPGKPHVRYLPGEDIPGLWVEVQ CCEECCCCCCCCEEECCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA