| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526398
Identifier: 222526398
GI number: 222526398
Start: 3924926
End: 3925615
Strand: Direct
Name: 222526398
Synonym: Chy400_3164
Alternate gene names: NA
Gene position: 3924926-3925615 (Clockwise)
Preceding gene: 222526397
Following gene: 222526399
Centisome position: 74.49
GC content: 49.57
Gene sequence:
>690_bases ATGAGTTACGTAGAAAGCCTGCTCGGGCGGGGAGAGCAAATTCTATACATTGCCCGCCAGCACATTTTTGTGTTGATTGT GAACATCTTGACCGAATTGTCGTTGATTGCCATCCTGGTGGCTGCTGGCGTCGCCTCGAATATGGCGTTTCGGAATAATC CGGCAGCGATGATTGGCAATATCAGCGTCAGCAATCTGATTTTGCTGATCTGTATTGTGATCAGTGTGATTGTACTGATC AGTGGTTTTCTCGACTTTTTACGCTGGAATTCGGAGCAAATTGTTATTACTGACCGTCGGGTTTTGCAGATACGTGGGAT TTTTAACAAACGGGTGATTGATTCCTCACTCGAAAAGATTAACGATATTGAATTGCGCCAGAGCATTTTCGGGCGTATCT TCAATTTCGGTACTATCGAGATACTCACTGCGTCCGGCAGCGAAGGTGCGAATCTGATGGATCGGATTGAAGCGCCACTG GAATTCAAGCGGGCATTGCTGGAAGCGAAGCATAATCTCGAACGGGGGTATGGCTATCTGGAAACCGATGGCTACGTACC CGGGCGACCGGTTGGTGGGGTGATTGATATTCAGCGCACGTTGGAAGAACTGGCCCGGCTGCGGGATCGGGGGATTCTGT CGCCGGAAGAGTTTGAGGCGAAGAAACGCGATCTGCTCAGCCGTATTTGA
Upstream 100 bases:
>100_bases CGAACGTGATCTTAAATCAGCCGGGTTTCTCGATCATCTGTTATCATCACAGTAGTACTGGTATGGTTACGACACTGCCG ACATCAAAGGAGGGCGGGCC
Downstream 100 bases:
>100_bases TTTATTGTTCCGGTGATGTTACTGATCCCGTCAGGATCGGTGTAGATAGAGACAGGTGGTCAATGTATAACGATATCGAA CAGGCTTGCGCAGCCATCGT
Product: membrane-flanked domain-containing protein
Products: NA
Alternate protein names: Membrane-Flanked Domain Protein
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MSYVESLLGRGEQILYIARQHIFVLIVNILTELSLIAILVAAGVASNMAFRNNPAAMIGNISVSNLILLICIVISVIVLI SGFLDFLRWNSEQIVITDRRVLQIRGIFNKRVIDSSLEKINDIELRQSIFGRIFNFGTIEILTASGSEGANLMDRIEAPL EFKRALLEAKHNLERGYGYLETDGYVPGRPVGGVIDIQRTLEELARLRDRGILSPEEFEAKKRDLLSRI
Sequences:
>Translated_229_residues MSYVESLLGRGEQILYIARQHIFVLIVNILTELSLIAILVAAGVASNMAFRNNPAAMIGNISVSNLILLICIVISVIVLI SGFLDFLRWNSEQIVITDRRVLQIRGIFNKRVIDSSLEKINDIELRQSIFGRIFNFGTIEILTASGSEGANLMDRIEAPL EFKRALLEAKHNLERGYGYLETDGYVPGRPVGGVIDIQRTLEELARLRDRGILSPEEFEAKKRDLLSRI >Mature_228_residues SYVESLLGRGEQILYIARQHIFVLIVNILTELSLIAILVAAGVASNMAFRNNPAAMIGNISVSNLILLICIVISVIVLIS GFLDFLRWNSEQIVITDRRVLQIRGIFNKRVIDSSLEKINDIELRQSIFGRIFNFGTIEILTASGSEGANLMDRIEAPLE FKRALLEAKHNLERGYGYLETDGYVPGRPVGGVIDIQRTLEELARLRDRGILSPEEFEAKKRDLLSRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25696; Mature: 25565
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYVESLLGRGEQILYIARQHIFVLIVNILTELSLIAILVAAGVASNMAFRNNPAAMIGN CCHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEC ISVSNLILLICIVISVIVLISGFLDFLRWNSEQIVITDRRVLQIRGIFNKRVIDSSLEKI CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHH NDIELRQSIFGRIFNFGTIEILTASGSEGANLMDRIEAPLEFKRALLEAKHNLERGYGYL HHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCEE ETDGYVPGRPVGGVIDIQRTLEELARLRDRGILSPEEFEAKKRDLLSRI ECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SYVESLLGRGEQILYIARQHIFVLIVNILTELSLIAILVAAGVASNMAFRNNPAAMIGN CHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEC ISVSNLILLICIVISVIVLISGFLDFLRWNSEQIVITDRRVLQIRGIFNKRVIDSSLEKI CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHH NDIELRQSIFGRIFNFGTIEILTASGSEGANLMDRIEAPLEFKRALLEAKHNLERGYGYL HHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCEE ETDGYVPGRPVGGVIDIQRTLEELARLRDRGILSPEEFEAKKRDLLSRI ECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA