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The map label for this gene is recO [H]

Identifier: 222526397

GI number: 222526397

Start: 3924125

End: 3924880

Strand: Direct

Name: recO [H]

Synonym: Chy400_3163

Alternate gene names: 222526397

Gene position: 3924125-3924880 (Clockwise)

Preceding gene: 222526385

Following gene: 222526398

Centisome position: 74.48

GC content: 56.88

Gene sequence:

>756_bases
ATGCGAGAGCGAGTGTATCGCAGCGAGGCGGTTATTCTTCGTCGTACCGATTTTGCCGAAGCCGATCGTCTGCTCCTGAT
TGCTACGCCAACCGGTAAGCGATGGGTTATCGCCAAAGGTGCGCGCAAGATGAAGAGTCGGCTGGCCGGCCACATCGAAC
TCTTCACCCACGCGCAGATGATGTTTGCCGTGGGGCGTAATCTTGATATTGTTACCCAGAGTCAGATTGTGCATGCCTTT
CCGGTCTTGCGTACCGATCTGACACGGTTGGGCTGTGGGTATTACGTGGCCGAGTTATACGACCGCCTGGCCGCTGAGTC
GGAAGAAAACCCGCTCCTGTTTCAACTTCTGGTCGAGACGCTGCAAGCGCTGGATGGCAGCGCCAATCCTGAACTGACGT
TGCGGAGCTTTGAATTACACCTGCTCCACATCCTCGGCTATCGTCCGCAGTTGCACTATTGCGTGGTTTGTAACGAGCTG
TTGACGCCGGCTGCCGACCGGTATAGCCCGACGCTCGGTGGTGTGCTCTGCCCCCGTGATCGCACCGCCGATCCAGCCGC
TCTCTCAATGAACGAGCCGACCTTTCGCCTGCTGCGCTATCTGCAAGCGCAACCTGTGACGGCTGCTGAAACACTCCGTA
TTTCACCAGCGACACGTCAGGAAGCCGCTACACTCCTGCGGGCCAGCTTACGCCTGTTGCTCGAACGTGATCTTAAATCA
GCCGGGTTTCTCGATCATCTGTTATCATCACAGTAG

Upstream 100 bases:

>100_bases
GACAAGTCAACGAGGGTCACCGACGGGGACTTGCATCAACCACACCCGCACAAGGCGCATCGCCGGTACAGCCCGACGGC
GCGTAATGGCGACAGGTTCC

Downstream 100 bases:

>100_bases
TACTGGTATGGTTACGACACTGCCGACATCAAAGGAGGGCGGGCCATGAGTTACGTAGAAAGCCTGCTCGGGCGGGGAGA
GCAAATTCTATACATTGCCC

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MRERVYRSEAVILRRTDFAEADRLLLIATPTGKRWVIAKGARKMKSRLAGHIELFTHAQMMFAVGRNLDIVTQSQIVHAF
PVLRTDLTRLGCGYYVAELYDRLAAESEENPLLFQLLVETLQALDGSANPELTLRSFELHLLHILGYRPQLHYCVVCNEL
LTPAADRYSPTLGGVLCPRDRTADPAALSMNEPTFRLLRYLQAQPVTAAETLRISPATRQEAATLLRASLRLLLERDLKS
AGFLDHLLSSQ

Sequences:

>Translated_251_residues
MRERVYRSEAVILRRTDFAEADRLLLIATPTGKRWVIAKGARKMKSRLAGHIELFTHAQMMFAVGRNLDIVTQSQIVHAF
PVLRTDLTRLGCGYYVAELYDRLAAESEENPLLFQLLVETLQALDGSANPELTLRSFELHLLHILGYRPQLHYCVVCNEL
LTPAADRYSPTLGGVLCPRDRTADPAALSMNEPTFRLLRYLQAQPVTAAETLRISPATRQEAATLLRASLRLLLERDLKS
AGFLDHLLSSQ
>Mature_251_residues
MRERVYRSEAVILRRTDFAEADRLLLIATPTGKRWVIAKGARKMKSRLAGHIELFTHAQMMFAVGRNLDIVTQSQIVHAF
PVLRTDLTRLGCGYYVAELYDRLAAESEENPLLFQLLVETLQALDGSANPELTLRSFELHLLHILGYRPQLHYCVVCNEL
LTPAADRYSPTLGGVLCPRDRTADPAALSMNEPTFRLLRYLQAQPVTAAETLRISPATRQEAATLLRASLRLLLERDLKS
AGFLDHLLSSQ

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 28252; Mature: 28252

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRERVYRSEAVILRRTDFAEADRLLLIATPTGKRWVIAKGARKMKSRLAGHIELFTHAQM
CCCCHHHCCEEEEEECCCCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
MFAVGRNLDIVTQSQIVHAFPVLRTDLTRLGCGYYVAELYDRLAAESEENPLLFQLLVET
HHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LQALDGSANPELTLRSFELHLLHILGYRPQLHYCVVCNELLTPAADRYSPTLGGVLCPRD
HHHHCCCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHCCCCCCCEECCCC
RTADPAALSMNEPTFRLLRYLQAQPVTAAETLRISPATRQEAATLLRASLRLLLERDLKS
CCCCCCEECCCCHHHHHHHHHHCCCCCHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
AGFLDHLLSSQ
HHHHHHHHCCC
>Mature Secondary Structure
MRERVYRSEAVILRRTDFAEADRLLLIATPTGKRWVIAKGARKMKSRLAGHIELFTHAQM
CCCCHHHCCEEEEEECCCCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
MFAVGRNLDIVTQSQIVHAFPVLRTDLTRLGCGYYVAELYDRLAAESEENPLLFQLLVET
HHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LQALDGSANPELTLRSFELHLLHILGYRPQLHYCVVCNELLTPAADRYSPTLGGVLCPRD
HHHHCCCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHCCCCCCCEECCCC
RTADPAALSMNEPTFRLLRYLQAQPVTAAETLRISPATRQEAATLLRASLRLLLERDLKS
CCCCCCEECCCCHHHHHHHHHHCCCCCHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
AGFLDHLLSSQ
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA