Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222525975
Identifier: 222525975
GI number: 222525975
Start: 3367784
End: 3368605
Strand: Direct
Name: 222525975
Synonym: Chy400_2731
Alternate gene names: NA
Gene position: 3367784-3368605 (Clockwise)
Preceding gene: 222525974
Following gene: 222525977
Centisome position: 63.92
GC content: 54.5
Gene sequence:
>822_bases ATGCACATTGCCCTCTATGTTGGTCAGAATCCTCAGCGCACAGCGCTACTCGCCTTTGCTGCACCAATTGTTGCGGCCTG TGCTCATCGGGTGACGCTCATTACACCAGTTTCCGGGCAAAACGATCTGGATGAGGTTGTCAATCAGTTGCACATTGACA CTGCCATTCCCGTGCAGCATCGTTGTCAGGAAACAACCTTTGCGGCTGCGATTCTGAGTGCTGTGCAGACTGAACGACCG GATTTGCTCATTGTGCCGGCATTTCCCCCTCATTTCATTCGCGGGCGACGGCTCGAATTCAATCTGCTCGCAGCTCTACC AGTATCATTTCTGCGCGTGCAGGGACATGTATCCGCTTCCCCCATTCGGCGGATCGCTGTTGCCAGTGCCGGGGGAGAGC AGTCGTTGCGGTGTGTGCCGTTGGTGAGTCAGATCGCCCGTGCTTTTCAGGCCAGTGTGACTGTGCTGCACGTCTCTTCG CAAGAGGTTGTCTATTTCGATGGTTTTGTGGCCTCTCCATTAACAGAGGAAGTTGCCTTGCAACTTGACGAATTGACCGG TACGATGCTCCGACGGCTGGTGAAAGAACTCAACACCCAGGGTGTTGATTGTCATTTGCAGGTGCTTAACGGTCTGGTCG AAGAGACGTTATTGAGTGAAGCGCAGCATTACGATCTGCTGGTGATCGGTAGCCATGAAGTCAGCGATGTTGTGCCTGAG CCGGGTGATCGCTGGGTACGTATGCTGCAACGTCTGTCGCTGCAGGATGTCACGCGCGATCTGTTAGAACGTAGCCCGAT CCCGGTGCTGGTGATTCGCTAG
Upstream 100 bases:
>100_bases GAGGAGAGGATTGTGCATTCACTGCCGCGTTTAGTCGCTTTTCTGGGGATCATGCTTGTCGTGCCGCTGTTGTTGTTGTT TGTGAGATGGTGAATACGTT
Downstream 100 bases:
>100_bases GATGGATCAGTGTGTGATGGGTTGGGCCACGATAGGTCGTTGTCGTCGTTCCTAACCGGCTTTGGGGCACGGCTGGCCGT GCCCGTCTATCTCAAGGTTG
Product: UspA domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MHIALYVGQNPQRTALLAFAAPIVAACAHRVTLITPVSGQNDLDEVVNQLHIDTAIPVQHRCQETTFAAAILSAVQTERP DLLIVPAFPPHFIRGRRLEFNLLAALPVSFLRVQGHVSASPIRRIAVASAGGEQSLRCVPLVSQIARAFQASVTVLHVSS QEVVYFDGFVASPLTEEVALQLDELTGTMLRRLVKELNTQGVDCHLQVLNGLVEETLLSEAQHYDLLVIGSHEVSDVVPE PGDRWVRMLQRLSLQDVTRDLLERSPIPVLVIR
Sequences:
>Translated_273_residues MHIALYVGQNPQRTALLAFAAPIVAACAHRVTLITPVSGQNDLDEVVNQLHIDTAIPVQHRCQETTFAAAILSAVQTERP DLLIVPAFPPHFIRGRRLEFNLLAALPVSFLRVQGHVSASPIRRIAVASAGGEQSLRCVPLVSQIARAFQASVTVLHVSS QEVVYFDGFVASPLTEEVALQLDELTGTMLRRLVKELNTQGVDCHLQVLNGLVEETLLSEAQHYDLLVIGSHEVSDVVPE PGDRWVRMLQRLSLQDVTRDLLERSPIPVLVIR >Mature_273_residues MHIALYVGQNPQRTALLAFAAPIVAACAHRVTLITPVSGQNDLDEVVNQLHIDTAIPVQHRCQETTFAAAILSAVQTERP DLLIVPAFPPHFIRGRRLEFNLLAALPVSFLRVQGHVSASPIRRIAVASAGGEQSLRCVPLVSQIARAFQASVTVLHVSS QEVVYFDGFVASPLTEEVALQLDELTGTMLRRLVKELNTQGVDCHLQVLNGLVEETLLSEAQHYDLLVIGSHEVSDVVPE PGDRWVRMLQRLSLQDVTRDLLERSPIPVLVIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30010; Mature: 30010
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIALYVGQNPQRTALLAFAAPIVAACAHRVTLITPVSGQNDLDEVVNQLHIDTAIPVQH CEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCCCCCCHHH RCQETTFAAAILSAVQTERPDLLIVPAFPPHFIRGRRLEFNLLAALPVSFLRVQGHVSAS HHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHCCCCEEEHHHHHHHHHHHHHHCCCCHH PIRRIAVASAGGEQSLRCVPLVSQIARAFQASVTVLHVSSQEVVYFDGFVASPLTEEVAL HHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCEEEECCCCCCCHHHHHHH QLDELTGTMLRRLVKELNTQGVDCHLQVLNGLVEETLLSEAQHYDLLVIGSHEVSDVVPE HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHCCCC PGDRWVRMLQRLSLQDVTRDLLERSPIPVLVIR CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC >Mature Secondary Structure MHIALYVGQNPQRTALLAFAAPIVAACAHRVTLITPVSGQNDLDEVVNQLHIDTAIPVQH CEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCCCCCCHHH RCQETTFAAAILSAVQTERPDLLIVPAFPPHFIRGRRLEFNLLAALPVSFLRVQGHVSAS HHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHCCCCEEEHHHHHHHHHHHHHHCCCCHH PIRRIAVASAGGEQSLRCVPLVSQIARAFQASVTVLHVSSQEVVYFDGFVASPLTEEVAL HHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCEEEECCCCCCCHHHHHHH QLDELTGTMLRRLVKELNTQGVDCHLQVLNGLVEETLLSEAQHYDLLVIGSHEVSDVVPE HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHCCCC PGDRWVRMLQRLSLQDVTRDLLERSPIPVLVIR CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA