Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222525974
Identifier: 222525974
GI number: 222525974
Start: 3366649
End: 3367776
Strand: Direct
Name: 222525974
Synonym: Chy400_2730
Alternate gene names: NA
Gene position: 3366649-3367776 (Clockwise)
Preceding gene: 222525972
Following gene: 222525975
Centisome position: 63.9
GC content: 55.41
Gene sequence:
>1128_bases GTGGTTGAGACGCCTGCTGCCGACACAAATGGATCATCTGAGGCGCGCATCGCAGCATCCTCGACTACATTGCGCTGGCA TTGGCGGGGAGTGTGCCGGCGTTGTGGATTTGCGCTTATCGGTTTGATCACCTTTGTGCTGGCGTTAGAGTTGCTCAAGC GCGGTGCTGCCGGTTACGGACGAGTGCTGATAGGGTGGCTAGACATAAGTTCTGCGGCAAGTGCGCTCGGTTTTGGCTGG TTGCTGTCTTACATCTTTCTGAGTGGATCGCCGGTGGCCGCCGTGGCTGTCTCTTTTTTTGCATCGGGTGTTATTGATGG CGTGCAGACCTTTACCATGATTACCGGCTCGCGCCTGGGTGCTTCATTTATTGTCCTGTTTGTTGGGTTTCTGTACCATC TGCGCGGCCATCGACGGGCGGCCAGTGTTGCGATTGGTGTGCTGTCACTGCTGACGACAGCGGCCATCTATCTGCCGGCA TTGGGGCTGGGATACTGGCTGCTCAGTTCGCAGTTGGTGGGAGTAATATCGGCCAGCGCCGATAGTCCGCTTAGTTCCGT GCTTGATCTGATTATCGATCCCGTTGTTGCCGTGATTGTTCGGCTGTTGCCAGAGTGGTCGTTGTTGGTGGTTGGAGCGC TGGTGCTGCTCGGTGCGTTCAGTCTGCTTGATCGGGCTATCCCTGAAGTTCCCGGTGGTCAGCAGGTGTTTGGGAAGGCC GGCCAACTCCTCTACCGACCGTGGGTGATGTTCCTGCTCGGCGCTGCGGTAACCTCATTTACGCTCTCGGTTTCGGTATC GCTGTCGATGCTGGTGCCGCTGACGGTGCGCGGTGTTATTCGACGCGAAAATGCGTTACCGTATATTATGGGCGCCAATA TCACAACGTTCATTGATACGTTAGTTGCGGCGTTACTCGTCGGAGGCGCAGCTGCATTCACCATTGTGCTGGTTGAGATG ATCTGTGTTGCCTTTTTCTCACTGATTGTTCTGCTCTTGTTCTACCGGTGGTTTGCCCGCGTTCTGCTCTGGTTGGAGGA GAGGATTGTGCATTCACTGCCGCGTTTAGTCGCTTTTCTGGGGATCATGCTTGTCGTGCCGCTGTTGTTGTTGTTTGTGA GATGGTGA
Upstream 100 bases:
>100_bases CTGGCTATCATACCAGATTATTAGTCCGCTCATAACTTTATGTTGTAAATATATGAACCCGTCATCTCGTCAAGAACCTT CTCCTCCGCTAGAGGCAGCC
Downstream 100 bases:
>100_bases ATACGTTATGCACATTGCCCTCTATGTTGGTCAGAATCCTCAGCGCACAGCGCTACTCGCCTTTGCTGCACCAATTGTTG CGGCCTGTGCTCATCGGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MVETPAADTNGSSEARIAASSTTLRWHWRGVCRRCGFALIGLITFVLALELLKRGAAGYGRVLIGWLDISSAASALGFGW LLSYIFLSGSPVAAVAVSFFASGVIDGVQTFTMITGSRLGASFIVLFVGFLYHLRGHRRAASVAIGVLSLLTTAAIYLPA LGLGYWLLSSQLVGVISASADSPLSSVLDLIIDPVVAVIVRLLPEWSLLVVGALVLLGAFSLLDRAIPEVPGGQQVFGKA GQLLYRPWVMFLLGAAVTSFTLSVSVSLSMLVPLTVRGVIRRENALPYIMGANITTFIDTLVAALLVGGAAAFTIVLVEM ICVAFFSLIVLLLFYRWFARVLLWLEERIVHSLPRLVAFLGIMLVVPLLLLFVRW
Sequences:
>Translated_375_residues MVETPAADTNGSSEARIAASSTTLRWHWRGVCRRCGFALIGLITFVLALELLKRGAAGYGRVLIGWLDISSAASALGFGW LLSYIFLSGSPVAAVAVSFFASGVIDGVQTFTMITGSRLGASFIVLFVGFLYHLRGHRRAASVAIGVLSLLTTAAIYLPA LGLGYWLLSSQLVGVISASADSPLSSVLDLIIDPVVAVIVRLLPEWSLLVVGALVLLGAFSLLDRAIPEVPGGQQVFGKA GQLLYRPWVMFLLGAAVTSFTLSVSVSLSMLVPLTVRGVIRRENALPYIMGANITTFIDTLVAALLVGGAAAFTIVLVEM ICVAFFSLIVLLLFYRWFARVLLWLEERIVHSLPRLVAFLGIMLVVPLLLLFVRW >Mature_375_residues MVETPAADTNGSSEARIAASSTTLRWHWRGVCRRCGFALIGLITFVLALELLKRGAAGYGRVLIGWLDISSAASALGFGW LLSYIFLSGSPVAAVAVSFFASGVIDGVQTFTMITGSRLGASFIVLFVGFLYHLRGHRRAASVAIGVLSLLTTAAIYLPA LGLGYWLLSSQLVGVISASADSPLSSVLDLIIDPVVAVIVRLLPEWSLLVVGALVLLGAFSLLDRAIPEVPGGQQVFGKA GQLLYRPWVMFLLGAAVTSFTLSVSVSLSMLVPLTVRGVIRRENALPYIMGANITTFIDTLVAALLVGGAAAFTIVLVEM ICVAFFSLIVLLLFYRWFARVLLWLEERIVHSLPRLVAFLGIMLVVPLLLLFVRW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40254; Mature: 40254
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVETPAADTNGSSEARIAASSTTLRWHWRGVCRRCGFALIGLITFVLALELLKRGAAGYG CCCCCCCCCCCCCCCEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC RVLIGWLDISSAASALGFGWLLSYIFLSGSPVAAVAVSFFASGVIDGVQTFTMITGSRLG HHHEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASFIVLFVGFLYHLRGHRRAASVAIGVLSLLTTAAIYLPALGLGYWLLSSQLVGVISASA HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DSPLSSVLDLIIDPVVAVIVRLLPEWSLLVVGALVLLGAFSLLDRAIPEVPGGQQVFGKA CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH GQLLYRPWVMFLLGAAVTSFTLSVSVSLSMLVPLTVRGVIRRENALPYIMGANITTFIDT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHH LVAALLVGGAAAFTIVLVEMICVAFFSLIVLLLFYRWFARVLLWLEERIVHSLPRLVAFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIMLVVPLLLLFVRW HHHHHHHHHHHHHCC >Mature Secondary Structure MVETPAADTNGSSEARIAASSTTLRWHWRGVCRRCGFALIGLITFVLALELLKRGAAGYG CCCCCCCCCCCCCCCEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC RVLIGWLDISSAASALGFGWLLSYIFLSGSPVAAVAVSFFASGVIDGVQTFTMITGSRLG HHHEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASFIVLFVGFLYHLRGHRRAASVAIGVLSLLTTAAIYLPALGLGYWLLSSQLVGVISASA HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DSPLSSVLDLIIDPVVAVIVRLLPEWSLLVVGALVLLGAFSLLDRAIPEVPGGQQVFGKA CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH GQLLYRPWVMFLLGAAVTSFTLSVSVSLSMLVPLTVRGVIRRENALPYIMGANITTFIDT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHH LVAALLVGGAAAFTIVLVEMICVAFFSLIVLLLFYRWFARVLLWLEERIVHSLPRLVAFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIMLVVPLLLLFVRW HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA