Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222525972
Identifier: 222525972
GI number: 222525972
Start: 3365150
End: 3366022
Strand: Direct
Name: 222525972
Synonym: Chy400_2728
Alternate gene names: NA
Gene position: 3365150-3366022 (Clockwise)
Preceding gene: 222525971
Following gene: 222525974
Centisome position: 63.87
GC content: 60.02
Gene sequence:
>873_bases ATGTTTCGCACCATTCTCGTTCCGCTTGATGGTTCAGTCGTGGGCGAGCAGGCGTTGGCAGCCGCAGCCCGGCTGGCGCG CGCATTTCAGGCTACCGTGCATCTGGTGCATGTGCATTATCCCAATTCGTTGACCCCCATCGTGATCGAAACGCTACCGG TGATTGATGCCGAATTGCATTCTCTGGCTGCTGAACACGAACGCTTTTACCTGAATCAAGTTGCTGCTCAGCCGGTTTTC AATGGCGTGCAGACGGTCGTTACCCGTCTGGAAGGGGCTGTTGCCGAGACGCTGGCGGCACATGCACAGGCGATCAATGC CGATCTGATCGTGATGACGACGCATGGCTGGAGTGGGTTTGAGCATTTCTGGCTGGGGAGCGTGGCCGAGTCGTTGTTGC GGTTGACCCACACCCCACTCTGGCTGATGCGACCGGGAGAATCGGCGTCGCGGGCTGCGCAACCGCTGCGTCGTATTCTC GTTCCCCTCGATGGCTCGGCGCGTGCCGAGCAGATTTTGGCACCGGTCCAGAGTCTGGCAGCGCTTGATGGCGCTCGTTT AACGCTGTCCCGTGTTCTGGTACAGCGCCGTGGTGCGGATCAGGCCGAAGTGACTGCACAAAAGCAGGAGATTGAAGCGT ATTTGCAGGCACTGGCAACCAGGCTGGAAGCGCAGGGGGTGCCGGCAGATATAGCGGTAGGTACTGCTGATCAACCGGCA CGGGCGCTGCTCACCCTGAGTCGTGAGCTACAGGTTGATGCGATTGCGCTGGCTACGCGCGGCCAGGGTGGCTGGCAGCG CATGGTGATGGGCAGTGTTGCCGATAAAATCATTCGTGCCAGTCCCGTGCCGGTGCTGGTTGTCCGTCCGTAA
Upstream 100 bases:
>100_bases TTAGCATATTGTTATCTGGTAGTTTGCGTCTAACTTGTTTCTGCGTCTGAATAAAGACAATTCATAATGATCTGACGTGC AATTGACAAGGAGGCGCGCT
Downstream 100 bases:
>100_bases TGCACTATGCGCCAGTTTTGATGAGTGTGACCGGGTCATCGACCCGTACTTCACCTTCGTTGATGACACGGGCGTAGAGT CGGCTCCAACCGGGATGGAG
Product: UspA domain-containing protein
Products: NA
Alternate protein names: UspA Domain-Containing Protein; Universal Stress Protein; Stress Response Protein; Universal Stress Protein Usp; Universal Stress Protein UspA-Like Protein; Universal Stress Protein Uspa-Like Protein; Universal Stress Family Protein; Universal Stress; Universal Stress Protein Family; Universal Stress Protein UspA
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MFRTILVPLDGSVVGEQALAAAARLARAFQATVHLVHVHYPNSLTPIVIETLPVIDAELHSLAAEHERFYLNQVAAQPVF NGVQTVVTRLEGAVAETLAAHAQAINADLIVMTTHGWSGFEHFWLGSVAESLLRLTHTPLWLMRPGESASRAAQPLRRIL VPLDGSARAEQILAPVQSLAALDGARLTLSRVLVQRRGADQAEVTAQKQEIEAYLQALATRLEAQGVPADIAVGTADQPA RALLTLSRELQVDAIALATRGQGGWQRMVMGSVADKIIRASPVPVLVVRP
Sequences:
>Translated_290_residues MFRTILVPLDGSVVGEQALAAAARLARAFQATVHLVHVHYPNSLTPIVIETLPVIDAELHSLAAEHERFYLNQVAAQPVF NGVQTVVTRLEGAVAETLAAHAQAINADLIVMTTHGWSGFEHFWLGSVAESLLRLTHTPLWLMRPGESASRAAQPLRRIL VPLDGSARAEQILAPVQSLAALDGARLTLSRVLVQRRGADQAEVTAQKQEIEAYLQALATRLEAQGVPADIAVGTADQPA RALLTLSRELQVDAIALATRGQGGWQRMVMGSVADKIIRASPVPVLVVRP >Mature_290_residues MFRTILVPLDGSVVGEQALAAAARLARAFQATVHLVHVHYPNSLTPIVIETLPVIDAELHSLAAEHERFYLNQVAAQPVF NGVQTVVTRLEGAVAETLAAHAQAINADLIVMTTHGWSGFEHFWLGSVAESLLRLTHTPLWLMRPGESASRAAQPLRRIL VPLDGSARAEQILAPVQSLAALDGARLTLSRVLVQRRGADQAEVTAQKQEIEAYLQALATRLEAQGVPADIAVGTADQPA RALLTLSRELQVDAIALATRGQGGWQRMVMGSVADKIIRASPVPVLVVRP
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31163; Mature: 31163
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRTILVPLDGSVVGEQALAAAARLARAFQATVHLVHVHYPNSLTPIVIETLPVIDAELH CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHCCHHHHHHH SLAAEHERFYLNQVAAQPVFNGVQTVVTRLEGAVAETLAAHAQAINADLIVMTTHGWSGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCH EHFWLGSVAESLLRLTHTPLWLMRPGESASRAAQPLRRILVPLDGSARAEQILAPVQSLA HHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH ALDGARLTLSRVLVQRRGADQAEVTAQKQEIEAYLQALATRLEAQGVPADIAVGTADQPA HHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHH RALLTLSRELQVDAIALATRGQGGWQRMVMGSVADKIIRASPVPVLVVRP HHHHHHHHHHCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEECC >Mature Secondary Structure MFRTILVPLDGSVVGEQALAAAARLARAFQATVHLVHVHYPNSLTPIVIETLPVIDAELH CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHCCHHHHHHH SLAAEHERFYLNQVAAQPVFNGVQTVVTRLEGAVAETLAAHAQAINADLIVMTTHGWSGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCH EHFWLGSVAESLLRLTHTPLWLMRPGESASRAAQPLRRILVPLDGSARAEQILAPVQSLA HHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH ALDGARLTLSRVLVQRRGADQAEVTAQKQEIEAYLQALATRLEAQGVPADIAVGTADQPA HHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHH RALLTLSRELQVDAIALATRGQGGWQRMVMGSVADKIIRASPVPVLVVRP HHHHHHHHHHCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA