Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222525971
Identifier: 222525971
GI number: 222525971
Start: 3364125
End: 3365027
Strand: Direct
Name: 222525971
Synonym: Chy400_2727
Alternate gene names: NA
Gene position: 3364125-3365027 (Clockwise)
Preceding gene: 222525970
Following gene: 222525972
Centisome position: 63.85
GC content: 46.07
Gene sequence:
>903_bases ATGACTGGCTTACGACAGGTATCACTATTCCCTGAGTTAGATAATCGATCCAAATCACATGCTCCGGTTAATGTGGCTTC TGTGCCACAACGCAGTCCTTTTCGATATCCGGGTGGTAAGACCTGGTTTGTGCCCACGTTTCGTCAATGGATGACCAGTA TGTCGGTAAAACCGAATCTTCTGGTGGAGCCATTTGCTGGTGGTGGGATTATTAGTTTAACCGCATTATTTGAGCAGTTG GTAGAACGAGTCGTGATGGTAGAACTAGACGCTGATGTGGCAGCAGTCTGGGAAGTCATCGTTCAGGGTGATGTGGAATG GCTGGTCGAGCGTATTCTGAGTTTTACCGTGACACGAGAAACTGTACTGGCGGAACTGGCAAAGGCACCGACGACGAAAC GTGAACGGGCGTTTCAGACGATTTTGCGCAATCGAACACTACGGGGCGGGATTTTAGCTGATGGTGCCCGGTTTATGAAA GCCGGTGAAAATGGGAAGGGAATCGGTTCGCGCTGGTATCCTCAGACTCTTGCTCGCCGTTTGCTTGATCTCCAACGTAT TGTTGATCGTATCGATTTTCGTTGCGATGATGGATTGCTCGTTATGACCGAGTATGCCTCTCGTGCCGATGCTGTATATT TTATCGATCCACCCTATACCGCCGGTGGGAAAAAGGCGGGAAAACGATTGTACAAACACCATCATATCAATCACGAGCAT TTGTTTCAATTGTGTCAATCACTTGCAGGTGATTTTTTAATGACATATGATGAATCAGAAGAAGTAAAACTGATGGCACA AAAATATGCATTCCAGACGAGATTAATCCCAATGAAGAATACACATCACGCAACAATGAATGAGCTTGTTATTGGTAAAG AATTGTCCTGGCTTGATGACTGA
Upstream 100 bases:
>100_bases CCGGGTCGTTCGGAAGACTTTATCAAGTTTCTGCAAGCGAAACTTCATGAGCAACGGCAGACGCGCCATTCAAATCTCTG ACCGAAAGGTTGTCTCTATC
Downstream 100 bases:
>100_bases TTATACATTACGAGCGTAACTATTAGCATATTGTTATCTGGTAGTTTGCGTCTAACTTGTTTCTGCGTCTGAATAAAGAC AATTCATAATGATCTGACGT
Product: D12 class N6 adenine-specific DNA methyltransferase
Products: NA
Alternate protein names: DNA-Methyltransferase; DNA Methyltransferase; N6 Adenine-Specific DNA Methyltransferase; Site-Specific DNA-Methyltransferase; Site-Specific DNA Methylase-Like Protein; Site-Specific DNA Methylase
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MTGLRQVSLFPELDNRSKSHAPVNVASVPQRSPFRYPGGKTWFVPTFRQWMTSMSVKPNLLVEPFAGGGIISLTALFEQL VERVVMVELDADVAAVWEVIVQGDVEWLVERILSFTVTRETVLAELAKAPTTKRERAFQTILRNRTLRGGILADGARFMK AGENGKGIGSRWYPQTLARRLLDLQRIVDRIDFRCDDGLLVMTEYASRADAVYFIDPPYTAGGKKAGKRLYKHHHINHEH LFQLCQSLAGDFLMTYDESEEVKLMAQKYAFQTRLIPMKNTHHATMNELVIGKELSWLDD
Sequences:
>Translated_300_residues MTGLRQVSLFPELDNRSKSHAPVNVASVPQRSPFRYPGGKTWFVPTFRQWMTSMSVKPNLLVEPFAGGGIISLTALFEQL VERVVMVELDADVAAVWEVIVQGDVEWLVERILSFTVTRETVLAELAKAPTTKRERAFQTILRNRTLRGGILADGARFMK AGENGKGIGSRWYPQTLARRLLDLQRIVDRIDFRCDDGLLVMTEYASRADAVYFIDPPYTAGGKKAGKRLYKHHHINHEH LFQLCQSLAGDFLMTYDESEEVKLMAQKYAFQTRLIPMKNTHHATMNELVIGKELSWLDD >Mature_299_residues TGLRQVSLFPELDNRSKSHAPVNVASVPQRSPFRYPGGKTWFVPTFRQWMTSMSVKPNLLVEPFAGGGIISLTALFEQLV ERVVMVELDADVAAVWEVIVQGDVEWLVERILSFTVTRETVLAELAKAPTTKRERAFQTILRNRTLRGGILADGARFMKA GENGKGIGSRWYPQTLARRLLDLQRIVDRIDFRCDDGLLVMTEYASRADAVYFIDPPYTAGGKKAGKRLYKHHHINHEHL FQLCQSLAGDFLMTYDESEEVKLMAQKYAFQTRLIPMKNTHHATMNELVIGKELSWLDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34098; Mature: 33967
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGLRQVSLFPELDNRSKSHAPVNVASVPQRSPFRYPGGKTWFVPTFRQWMTSMSVKPNL CCCCCCEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCEEECHHHHHHHHHCCCCCCE LVEPFAGGGIISLTALFEQLVERVVMVELDADVAAVWEVIVQGDVEWLVERILSFTVTRE EEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH TVLAELAKAPTTKRERAFQTILRNRTLRGGILADGARFMKAGENGKGIGSRWYPQTLARR HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHCCHHHHHCCCCCCCCCCCCCHHHHHHH LLDLQRIVDRIDFRCDDGLLVMTEYASRADAVYFIDPPYTAGGKKAGKRLYKHHHINHEH HHHHHHHHHHHCCCCCCCEEEEEEHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCHHH LFQLCQSLAGDFLMTYDESEEVKLMAQKYAFQTRLIPMKNTHHATMNELVIGKELSWLDD HHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHCCCCHHCCCC >Mature Secondary Structure TGLRQVSLFPELDNRSKSHAPVNVASVPQRSPFRYPGGKTWFVPTFRQWMTSMSVKPNL CCCCCEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCEEECHHHHHHHHHCCCCCCE LVEPFAGGGIISLTALFEQLVERVVMVELDADVAAVWEVIVQGDVEWLVERILSFTVTRE EEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH TVLAELAKAPTTKRERAFQTILRNRTLRGGILADGARFMKAGENGKGIGSRWYPQTLARR HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHCCHHHHHCCCCCCCCCCCCCHHHHHHH LLDLQRIVDRIDFRCDDGLLVMTEYASRADAVYFIDPPYTAGGKKAGKRLYKHHHINHEH HHHHHHHHHHHCCCCCCCEEEEEEHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCHHH LFQLCQSLAGDFLMTYDESEEVKLMAQKYAFQTRLIPMKNTHHATMNELVIGKELSWLDD HHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA