| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222524810
Identifier: 222524810
GI number: 222524810
Start: 1958302
End: 1959108
Strand: Direct
Name: 222524810
Synonym: Chy400_1537
Alternate gene names: NA
Gene position: 1958302-1959108 (Clockwise)
Preceding gene: 222524808
Following gene: 222524811
Centisome position: 37.17
GC content: 58.24
Gene sequence:
>807_bases ATGAACGTTCCACCGACAACCATCTATCTCGGCCTGGACCTGGCGTGGTCAGAGCGCAATCCCAGTGGCCTGGCGGCAGC CTGGGGTACACCGAGTGGCGCGCATCTGATAGTTCGTCCACACCATTTGAAGACGACCGCAGAGATTGTGGCGACAATTC GCGCTACCTGTGGCGATGCGCCGGCCATCCTGGCCATTGACGCTCCACTCCTCGTACCAAATGAGACCGGTCGGCGTCTG GCTGAAGCCGAGTTAGCGGCAGCGTTTCGTCAGTATCACGCCGGGCCACACCCGGCAAACCGACAGTTGCTGCGACGTTA CGGTGGTTTGCGTGGCGAGGAAATCATTGCTGCACTGGCCAGTGATGGATTCTGCTACACACCAACGATTGAGAGCGGGG GCGGCGGGCGATTGATTGTTGAAGTCTTTCCACACCCGGCAACCATCGTTCTCTTCGGGTTGCCCCGGATTCTGCAATAC AAAGCGCGCCAGGGACGTTCCTTAGTCAGTCGGCGACACGAACTGCGGCGGTATCTCGACCTGCTGGGCAGTTTGATCCA CGCCGATCCGCCGCTGATTGGCGTTGACCGCATCTGGGAGAAGGTTGATCTGAGCGATACAGGTGCAACGGCACTCAAAG CTATCGAAGACGAAGCCGATGCGGTACTATGTGCCTACATTGCGCTCTATGGTCATCGTTGGGGAGCAGCGAGATGTCGC AGCTTCGGCACAGTTGACGGTGGGGCAATTTTTACCCCATACTGGTACGAACAAAAGACCCCAGCAGCGCCGATCAATCA GGGATAG
Upstream 100 bases:
>100_bases GGGGGATTTATTGTACCCATATTGACCTCCCTGTCGTTCAGATTTGACTATACTGTACTCTAAATAACCGGCTACCGGCG TTATAATCAGGCAACCAGCA
Downstream 100 bases:
>100_bases GCTATGTTCGACAGTCGAACCACAACCGAACTCTTCTATCAATTTGGCCTGGCCTTGCTCATCGGGGCATTGATCGGCTT ACAACGCGAGCATGCCTACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MNVPPTTIYLGLDLAWSERNPSGLAAAWGTPSGAHLIVRPHHLKTTAEIVATIRATCGDAPAILAIDAPLLVPNETGRRL AEAELAAAFRQYHAGPHPANRQLLRRYGGLRGEEIIAALASDGFCYTPTIESGGGGRLIVEVFPHPATIVLFGLPRILQY KARQGRSLVSRRHELRRYLDLLGSLIHADPPLIGVDRIWEKVDLSDTGATALKAIEDEADAVLCAYIALYGHRWGAARCR SFGTVDGGAIFTPYWYEQKTPAAPINQG
Sequences:
>Translated_268_residues MNVPPTTIYLGLDLAWSERNPSGLAAAWGTPSGAHLIVRPHHLKTTAEIVATIRATCGDAPAILAIDAPLLVPNETGRRL AEAELAAAFRQYHAGPHPANRQLLRRYGGLRGEEIIAALASDGFCYTPTIESGGGGRLIVEVFPHPATIVLFGLPRILQY KARQGRSLVSRRHELRRYLDLLGSLIHADPPLIGVDRIWEKVDLSDTGATALKAIEDEADAVLCAYIALYGHRWGAARCR SFGTVDGGAIFTPYWYEQKTPAAPINQG >Mature_268_residues MNVPPTTIYLGLDLAWSERNPSGLAAAWGTPSGAHLIVRPHHLKTTAEIVATIRATCGDAPAILAIDAPLLVPNETGRRL AEAELAAAFRQYHAGPHPANRQLLRRYGGLRGEEIIAALASDGFCYTPTIESGGGGRLIVEVFPHPATIVLFGLPRILQY KARQGRSLVSRRHELRRYLDLLGSLIHADPPLIGVDRIWEKVDLSDTGATALKAIEDEADAVLCAYIALYGHRWGAARCR SFGTVDGGAIFTPYWYEQKTPAAPINQG
Specific function: Unknown
COG id: COG4328
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29029; Mature: 29029
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVPPTTIYLGLDLAWSERNPSGLAAAWGTPSGAHLIVRPHHLKTTAEIVATIRATCGDA CCCCCCEEEEEEEEEECCCCCCCEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCC PAILAIDAPLLVPNETGRRLAEAELAAAFRQYHAGPHPANRQLLRRYGGLRGEEIIAALA CEEEEECCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHH SDGFCYTPTIESGGGGRLIVEVFPHPATIVLFGLPRILQYKARQGRSLVSRRHELRRYLD CCCEEECCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH LLGSLIHADPPLIGVDRIWEKVDLSDTGATALKAIEDEADAVLCAYIALYGHRWGAARCR HHHHHHHCCCCEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH SFGTVDGGAIFTPYWYEQKTPAAPINQG HCCCCCCCEEECCEEECCCCCCCCCCCC >Mature Secondary Structure MNVPPTTIYLGLDLAWSERNPSGLAAAWGTPSGAHLIVRPHHLKTTAEIVATIRATCGDA CCCCCCEEEEEEEEEECCCCCCCEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCC PAILAIDAPLLVPNETGRRLAEAELAAAFRQYHAGPHPANRQLLRRYGGLRGEEIIAALA CEEEEECCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHH SDGFCYTPTIESGGGGRLIVEVFPHPATIVLFGLPRILQYKARQGRSLVSRRHELRRYLD CCCEEECCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH LLGSLIHADPPLIGVDRIWEKVDLSDTGATALKAIEDEADAVLCAYIALYGHRWGAARCR HHHHHHHCCCCEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH SFGTVDGGAIFTPYWYEQKTPAAPINQG HCCCCCCCEEECCEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA