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The map label for this gene is carC [H]

Identifier: 222524808

GI number: 222524808

Start: 1956191

End: 1957705

Strand: Direct

Name: carC [H]

Synonym: Chy400_1535

Alternate gene names: 222524808

Gene position: 1956191-1957705 (Clockwise)

Preceding gene: 222524807

Following gene: 222524810

Centisome position: 37.13

GC content: 55.91

Gene sequence:

>1515_bases
GTGTCACCACGAATTGTTATTGTCGGCGCCGGCCCTGGTGGGATGGCTACCGCCATTCGCTTAGCCGGTCAGGGCTATCA
GGTTGAAATCTTTGAAGCAGTTGATCGTCCGGGTGGACGCATGCGCGGCTTCTCACTCGGTGATTACCATTTCGACACGG
GGCCAACGATCTTGCAAGTGCCACGGGTCTACGATGAGTTGTTTAGCAGTGCCGGGTTACGTTTCAGCGATTATGTCACG
CTCATCCGGCTCGATCCAAATACCCGCATTCGCTTTTGGGATGGTGAATATCTTGATTTGACCTCAAACATTGCAGCCTT
CAAAGCACAGTTGGCCCGCTTTGATCCAGCATTGCCGGCAGAGTTTGAGCGCTGGTATATCGAGCATATCCGTAAGAATG
TGGTCGGTTATGAACCATACCTGGGCACACCGGTGCGCAGTCCACTCGGCTACTTGAAACCTCGCGAGATCGCGGCTGCG
CTGGCCTTCCGCCCCTGGGAGAGCTTATACGATCACTTCAAGCGCTTCTTCCGCGACGAACGGGTCGTCTACGCGCTGTC
ATACCAGGCCAAATATCTGGGCATGCACCCAACCGCGTGTTCCAGCGTGTTCAGCCTGGTAACCTTTCTCGAATTTGCCG
ACGGCATCTGGCACCCGCGTGGCGGCTTCCGTGCCCTGGCCGCCGGCCTGGCGAAAGCTGCAACCGACCTGGGTGTTGTT
ATTCACTACAACAGTCCGGTGAAGCAAGTACTGGTAGAAGAGGGACGGGCCTGCGGCGTTGAGCTGGTCGGTGGCGAACG
GATAAAGGCTGATGCAGTAGTCGTGAATGCCGATTTTGGTCACGCGCTCACTCATATTATTCCGCCCCACGCACGCGGCA
CATACACCGACCAGAAGCTCAACTCGATGGAGTTTTCATGCTCGACCTTTATGCTCTACCTGGGCGTTAACCGGCGTTGG
GATCATCTGCCACACCATCAACTCTACCTGTCGGCCAACATTCGTCGCAACGATCCTTTGTGGGCGAAGAGTGCCGTTCT
GGATGAAGATGACCCATCATTCTACGTATGCAACCCGACTATCGTTGATCCAACCAACGCGCCGCCCGGACACAGCACCC
TCTTCGTGCTGGTACCAGTTCCTAACCTGCGCTATCCGGTCGATTGGGCAGCGGTCGAGCAGCGCTATCGCGACCTGATT
ATCCGGCAGATGGCCAAACTCGGCTTTGAAGACGTTGAACGCCACATTGTCGTTGAACGACGGTACACTGCGGAGACATG
GCGTGACGAGCACCACACCTATCTGGGTGCAGTCTTCAATTTGATTCACAGTTGGAGTCAACTCGGCCCTTTTCGCCCGC
ATATCCGCCACAATGGCGCACGCAACCTCTACTGGATCGGTGGGGCAGTCCATCCAGGTAGTGGCTTGATGACCATTCTG
GAAGCAGCGAAGAGCGCTGTACATTTTATCGGTGAAGACCTACCGCTTCACCAGACAACCGCGGTTGCCCATTAG

Upstream 100 bases:

>100_bases
CAGCGTCAGAAACACCCAATAGCCAGCGTGACCGGCTATCAAAAGCGGTGTATACTCAAACAGGAGTACATGTTTTCATC
ATCATATAGAGGAGTAGGGA

Downstream 100 bases:

>100_bases
CCTGCCAGGCATCAGCGTGGGCGTTGCCCCGGGGCAACGCCCGGCACCCATCCATTCAAAACCTTAATCGCGGGCACTGC
CGTGGGCCAGTGCAAACAGC

Product: phytoene desaturase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 504; Mature: 503

Protein sequence:

>504_residues
MSPRIVIVGAGPGGMATAIRLAGQGYQVEIFEAVDRPGGRMRGFSLGDYHFDTGPTILQVPRVYDELFSSAGLRFSDYVT
LIRLDPNTRIRFWDGEYLDLTSNIAAFKAQLARFDPALPAEFERWYIEHIRKNVVGYEPYLGTPVRSPLGYLKPREIAAA
LAFRPWESLYDHFKRFFRDERVVYALSYQAKYLGMHPTACSSVFSLVTFLEFADGIWHPRGGFRALAAGLAKAATDLGVV
IHYNSPVKQVLVEEGRACGVELVGGERIKADAVVVNADFGHALTHIIPPHARGTYTDQKLNSMEFSCSTFMLYLGVNRRW
DHLPHHQLYLSANIRRNDPLWAKSAVLDEDDPSFYVCNPTIVDPTNAPPGHSTLFVLVPVPNLRYPVDWAAVEQRYRDLI
IRQMAKLGFEDVERHIVVERRYTAETWRDEHHTYLGAVFNLIHSWSQLGPFRPHIRHNGARNLYWIGGAVHPGSGLMTIL
EAAKSAVHFIGEDLPLHQTTAVAH

Sequences:

>Translated_504_residues
MSPRIVIVGAGPGGMATAIRLAGQGYQVEIFEAVDRPGGRMRGFSLGDYHFDTGPTILQVPRVYDELFSSAGLRFSDYVT
LIRLDPNTRIRFWDGEYLDLTSNIAAFKAQLARFDPALPAEFERWYIEHIRKNVVGYEPYLGTPVRSPLGYLKPREIAAA
LAFRPWESLYDHFKRFFRDERVVYALSYQAKYLGMHPTACSSVFSLVTFLEFADGIWHPRGGFRALAAGLAKAATDLGVV
IHYNSPVKQVLVEEGRACGVELVGGERIKADAVVVNADFGHALTHIIPPHARGTYTDQKLNSMEFSCSTFMLYLGVNRRW
DHLPHHQLYLSANIRRNDPLWAKSAVLDEDDPSFYVCNPTIVDPTNAPPGHSTLFVLVPVPNLRYPVDWAAVEQRYRDLI
IRQMAKLGFEDVERHIVVERRYTAETWRDEHHTYLGAVFNLIHSWSQLGPFRPHIRHNGARNLYWIGGAVHPGSGLMTIL
EAAKSAVHFIGEDLPLHQTTAVAH
>Mature_503_residues
SPRIVIVGAGPGGMATAIRLAGQGYQVEIFEAVDRPGGRMRGFSLGDYHFDTGPTILQVPRVYDELFSSAGLRFSDYVTL
IRLDPNTRIRFWDGEYLDLTSNIAAFKAQLARFDPALPAEFERWYIEHIRKNVVGYEPYLGTPVRSPLGYLKPREIAAAL
AFRPWESLYDHFKRFFRDERVVYALSYQAKYLGMHPTACSSVFSLVTFLEFADGIWHPRGGFRALAAGLAKAATDLGVVI
HYNSPVKQVLVEEGRACGVELVGGERIKADAVVVNADFGHALTHIIPPHARGTYTDQKLNSMEFSCSTFMLYLGVNRRWD
HLPHHQLYLSANIRRNDPLWAKSAVLDEDDPSFYVCNPTIVDPTNAPPGHSTLFVLVPVPNLRYPVDWAAVEQRYRDLII
RQMAKLGFEDVERHIVVERRYTAETWRDEHHTYLGAVFNLIHSWSQLGPFRPHIRHNGARNLYWIGGAVHPGSGLMTILE
AAKSAVHFIGEDLPLHQTTAVAH

Specific function: This enzyme converts phytoene into lycopene via the intermediaries of phytofluene, zeta-carotene and neurosporene by the introduction of four double bonds [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: 1.14.99.-

Molecular weight: Translated: 56805; Mature: 56674

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPRIVIVGAGPGGMATAIRLAGQGYQVEIFEAVDRPGGRMRGFSLGDYHFDTGPTILQV
CCCCEEEEECCCCCHHHHHEECCCCCEEEEEEHHCCCCCCCCCCCCCCEECCCCCCEEEC
PRVYDELFSSAGLRFSDYVTLIRLDPNTRIRFWDGEYLDLTSNIAAFKAQLARFDPALPA
HHHHHHHHHHCCCEEEEEEEEEEECCCCEEEEECCCEEEHHHHHHHHHHHHHHCCCCCCH
EFERWYIEHIRKNVVGYEPYLGTPVRSPLGYLKPREIAAALAFRPWESLYDHFKRFFRDE
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCC
RVVYALSYQAKYLGMHPTACSSVFSLVTFLEFADGIWHPRGGFRALAAGLAKAATDLGVV
EEEEEEEECEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEE
IHYNSPVKQVLVEEGRACGVELVGGERIKADAVVVNADFGHALTHIIPPHARGTYTDQKL
EEECCHHHHHHHHCCCCCCEEEECCCEEEEEEEEEECCCCHHHHHHCCCCCCCCCCHHHH
NSMEFSCSTFMLYLGVNRRWDHLPHHQLYLSANIRRNDPLWAKSAVLDEDDPSFYVCNPT
CCCCCCHHEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCHHHCCCCCCCCCEEEECCE
IVDPTNAPPGHSTLFVLVPVPNLRYPVDWAAVEQRYRDLIIRQMAKLGFEDVERHIVVER
EECCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHEEEEE
RYTAETWRDEHHTYLGAVFNLIHSWSQLGPFRPHIRHNGARNLYWIGGAVHPGSGLMTIL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEECCEECCCCHHHHHH
EAAKSAVHFIGEDLPLHQTTAVAH
HHHHHHHHHHCCCCCCCCHHCCCC
>Mature Secondary Structure 
SPRIVIVGAGPGGMATAIRLAGQGYQVEIFEAVDRPGGRMRGFSLGDYHFDTGPTILQV
CCCEEEEECCCCCHHHHHEECCCCCEEEEEEHHCCCCCCCCCCCCCCEECCCCCCEEEC
PRVYDELFSSAGLRFSDYVTLIRLDPNTRIRFWDGEYLDLTSNIAAFKAQLARFDPALPA
HHHHHHHHHHCCCEEEEEEEEEEECCCCEEEEECCCEEEHHHHHHHHHHHHHHCCCCCCH
EFERWYIEHIRKNVVGYEPYLGTPVRSPLGYLKPREIAAALAFRPWESLYDHFKRFFRDE
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCC
RVVYALSYQAKYLGMHPTACSSVFSLVTFLEFADGIWHPRGGFRALAAGLAKAATDLGVV
EEEEEEEECEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEE
IHYNSPVKQVLVEEGRACGVELVGGERIKADAVVVNADFGHALTHIIPPHARGTYTDQKL
EEECCHHHHHHHHCCCCCCEEEECCCEEEEEEEEEECCCCHHHHHHCCCCCCCCCCHHHH
NSMEFSCSTFMLYLGVNRRWDHLPHHQLYLSANIRRNDPLWAKSAVLDEDDPSFYVCNPT
CCCCCCHHEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCHHHCCCCCCCCCEEEECCE
IVDPTNAPPGHSTLFVLVPVPNLRYPVDWAAVEQRYRDLIIRQMAKLGFEDVERHIVVER
EECCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHEEEEE
RYTAETWRDEHHTYLGAVFNLIHSWSQLGPFRPHIRHNGARNLYWIGGAVHPGSGLMTIL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEECCEECCCCHHHHHH
EAAKSAVHFIGEDLPLHQTTAVAH
HHHHHHHHHHCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8467787 [H]