| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524811
Identifier: 222524811
GI number: 222524811
Start: 1959112
End: 1960383
Strand: Direct
Name: 222524811
Synonym: Chy400_1538
Alternate gene names: NA
Gene position: 1959112-1960383 (Clockwise)
Preceding gene: 222524810
Following gene: 222524813
Centisome position: 37.18
GC content: 54.56
Gene sequence:
>1272_bases ATGTTCGACAGTCGAACCACAACCGAACTCTTCTATCAATTTGGCCTGGCCTTGCTCATCGGGGCATTGATCGGCTTACA ACGCGAGCATGCCTACACCGGCGTTGGCGAGTTATTTGCCGGCGTGCGCACGTATGCCATCGTTGGTCTCATTGGTTGTG CAGGAGGGTTAGCAGGCATTACCCTACAGGCACCGATCATCTTTGCTGCTCTGATAGTCATCGTAGGGGGACTATTAATT GCCGCGTATGTTGTAGGCAGTGGTCAGGAAGGACTGGGGCTAACCAGTGAGATGGCGCTCATTACTACACTCCTGTGCGG TGGCCTGATTGCCTGGGGGTACGGAACACTAGCCACGGCTGTAGGGGTAGCAACTGCGGGCTTACTGGCATTGAAAAGTC GCCTACACGATTTCGCACATCGGCTCAGTACCCAAGACATGCAAGCGGCCCTAACACTGGCGGCAATCAGTGCGATCATC TTGCCGATCCTGCCCAGCACATCAGTAGCTCCGGCGCCATTTGATGTCATCAATCCCCAGAAGATATGGTTTCTGGTTGT CCTCATTTCGACCTTCAACTTCAGCGGCTATGCGCTACACAAGATCATTGGGGCAACCCGCGGTATTGCATTAACCGGCA TCATCGGCGGAATCGTCTCATCAACGGCAGTAACCCTGAGTAATACACAGCGTAGTCACAGCGAACCAGCGTTGAGTCGG GCGTATGCGCTGGCCATTCTTCTGGCGTGGAGTGTTATGTTCCTGCGAGTGGCGATCCTAACCGGTGCGATTGCACCGAA TGTCCTTCCCTTTCTATGGCCAATCATTGCCATCGGCGGCAGTGCTTGCCTGATTGGGAGTCTCTGGTTAGTAAAACAAG CGCAGGGCAACGATTCGAGCAGTCTAACGCTTAGCAATCCGCTGGAGCTACGGTCGGCTATCGGTTTCAGCTTACTGTAC GCCGCCATCCTGATCGGCGCAAACCTGGCGCGAACCTGGTTTGGTGATGCCGGAATTTATCTCTCCAGCATCTTTGGCGG ATTAGTTGACGTGGATGCGATAACCCTCTCACTCAGCGAGCTGGCAACAGTTAGAGACGGAATTGGCGAGCAGACCGCAG CGCGGGCTATCGGTACTGCCGTCCTGACCAACACCCTGGTGAAAGGAGGGATTGTCCTTGGCGGAGGTTCAAGCCTCTTG CGAAAGGCCATGGCGCCTATATTCACATTAATGACATGTGCCATGCTGGTCGGACTGCTCTGGCCATGGTAA
Upstream 100 bases:
>100_bases GAGATGTCGCAGCTTCGGCACAGTTGACGGTGGGGCAATTTTTACCCCATACTGGTACGAACAAAAGACCCCAGCAGCGC CGATCAATCAGGGATAGGCT
Downstream 100 bases:
>100_bases GATCGCATATCGCTGATGACGACTACCATCACCAGATCCATGGAAACAGTCGCCAGGTGCGTTGTTGATACGTCTGGTAG TCAGCAAACCGAGACTGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MFDSRTTTELFYQFGLALLIGALIGLQREHAYTGVGELFAGVRTYAIVGLIGCAGGLAGITLQAPIIFAALIVIVGGLLI AAYVVGSGQEGLGLTSEMALITTLLCGGLIAWGYGTLATAVGVATAGLLALKSRLHDFAHRLSTQDMQAALTLAAISAII LPILPSTSVAPAPFDVINPQKIWFLVVLISTFNFSGYALHKIIGATRGIALTGIIGGIVSSTAVTLSNTQRSHSEPALSR AYALAILLAWSVMFLRVAILTGAIAPNVLPFLWPIIAIGGSACLIGSLWLVKQAQGNDSSSLTLSNPLELRSAIGFSLLY AAILIGANLARTWFGDAGIYLSSIFGGLVDVDAITLSLSELATVRDGIGEQTAARAIGTAVLTNTLVKGGIVLGGGSSLL RKAMAPIFTLMTCAMLVGLLWPW
Sequences:
>Translated_423_residues MFDSRTTTELFYQFGLALLIGALIGLQREHAYTGVGELFAGVRTYAIVGLIGCAGGLAGITLQAPIIFAALIVIVGGLLI AAYVVGSGQEGLGLTSEMALITTLLCGGLIAWGYGTLATAVGVATAGLLALKSRLHDFAHRLSTQDMQAALTLAAISAII LPILPSTSVAPAPFDVINPQKIWFLVVLISTFNFSGYALHKIIGATRGIALTGIIGGIVSSTAVTLSNTQRSHSEPALSR AYALAILLAWSVMFLRVAILTGAIAPNVLPFLWPIIAIGGSACLIGSLWLVKQAQGNDSSSLTLSNPLELRSAIGFSLLY AAILIGANLARTWFGDAGIYLSSIFGGLVDVDAITLSLSELATVRDGIGEQTAARAIGTAVLTNTLVKGGIVLGGGSSLL RKAMAPIFTLMTCAMLVGLLWPW >Mature_423_residues MFDSRTTTELFYQFGLALLIGALIGLQREHAYTGVGELFAGVRTYAIVGLIGCAGGLAGITLQAPIIFAALIVIVGGLLI AAYVVGSGQEGLGLTSEMALITTLLCGGLIAWGYGTLATAVGVATAGLLALKSRLHDFAHRLSTQDMQAALTLAAISAII LPILPSTSVAPAPFDVINPQKIWFLVVLISTFNFSGYALHKIIGATRGIALTGIIGGIVSSTAVTLSNTQRSHSEPALSR AYALAILLAWSVMFLRVAILTGAIAPNVLPFLWPIIAIGGSACLIGSLWLVKQAQGNDSSSLTLSNPLELRSAIGFSLLY AAILIGANLARTWFGDAGIYLSSIFGGLVDVDAITLSLSELATVRDGIGEQTAARAIGTAVLTNTLVKGGIVLGGGSSLL RKAMAPIFTLMTCAMLVGLLWPW
Specific function: Unknown
COG id: COG3174
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To P.aeruginosa PA0043 and M.thermoautotrophicum MTH1451 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43780; Mature: 43780
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDSRTTTELFYQFGLALLIGALIGLQREHAYTGVGELFAGVRTYAIVGLIGCAGGLAGI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHCH TLQAPIIFAALIVIVGGLLIAAYVVGSGQEGLGLTSEMALITTLLCGGLIAWGYGTLATA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VGVATAGLLALKSRLHDFAHRLSTQDMQAALTLAAISAIILPILPSTSVAPAPFDVINPQ HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH KIWFLVVLISTFNFSGYALHKIIGATRGIALTGIIGGIVSSTAVTLSNTQRSHSEPALSR HHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHH AYALAILLAWSVMFLRVAILTGAIAPNVLPFLWPIIAIGGSACLIGSLWLVKQAQGNDSS HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCC SLTLSNPLELRSAIGFSLLYAAILIGANLARTWFGDAGIYLSSIFGGLVDVDAITLSLSE CEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LATVRDGIGEQTAARAIGTAVLTNTLVKGGIVLGGGSSLLRKAMAPIFTLMTCAMLVGLL HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH WPW CCC >Mature Secondary Structure MFDSRTTTELFYQFGLALLIGALIGLQREHAYTGVGELFAGVRTYAIVGLIGCAGGLAGI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHCH TLQAPIIFAALIVIVGGLLIAAYVVGSGQEGLGLTSEMALITTLLCGGLIAWGYGTLATA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VGVATAGLLALKSRLHDFAHRLSTQDMQAALTLAAISAIILPILPSTSVAPAPFDVINPQ HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH KIWFLVVLISTFNFSGYALHKIIGATRGIALTGIIGGIVSSTAVTLSNTQRSHSEPALSR HHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHH AYALAILLAWSVMFLRVAILTGAIAPNVLPFLWPIIAIGGSACLIGSLWLVKQAQGNDSS HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCC SLTLSNPLELRSAIGFSLLYAAILIGANLARTWFGDAGIYLSSIFGGLVDVDAITLSLSE CEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LATVRDGIGEQTAARAIGTAVLTNTLVKGGIVLGGGSSLLRKAMAPIFTLMTCAMLVGLL HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH WPW CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]