| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524560
Identifier: 222524560
GI number: 222524560
Start: 1644788
End: 1646293
Strand: Direct
Name: 222524560
Synonym: Chy400_1284
Alternate gene names: NA
Gene position: 1644788-1646293 (Clockwise)
Preceding gene: 222524559
Following gene: 222524563
Centisome position: 31.22
GC content: 56.84
Gene sequence:
>1506_bases ATGGGCGACTCACCGAACCCAACATTTTGTGCGAGCTGTGGACATAAGCTCACCCCGGAAGATCGCTTTTGTCCAGAGTG TGGTGCGCGAGCACCTGAACGACCGTCGGCACCGGCTGCAGGAGCACCACCCACGGTGGTAATTCCCCCTGGACAAGCCG GAGCGGAAACCTCACCTGAAGCAACGGCGGCCCCAATATTTTGCATGAACTGTGGACGAAAGCTCACCCCAGAAGATCGT TTCTGCCCAGAGTGTGGTACGCGAGCACCTGAGCGACCTTCGCCACCAGCCACAGGAGCACCACCCACTGTTGTCATCCC ACCGCAGCAACCCACCGCAGGAGCAGCACCAACGGTGATCATTCCTCCAGATCAACCGACTCCGGGTGCGCCACCAACCG TCATGATTCCCCCGGAGCAGCCGGCAACAGGGGCACCGCCTACCGTCGTCATCCCACCGCAGCAACCGACGCCAGGGGTA CCACCCACAGTCATTATCCCCCCTGAACAGCCACCAGCGGGAGCTGCTCCAACTGTCGTGATCCCCCCTGAGCAGTCACC GGCAGGCGTACCACCAGTCACCCCTCCTCCACCCCAACCGTCGGTGGGAAGAACACCTGCTTCTTATCCACCACCGGTCA TACCACCTGCCCAGAGTGCAGGAACGCCACCAGATCCATTTATGCCGCCACCGGTAACCCCTGTCTCGTATGGCCCACCA CCTGCCGGCACCGACCCATTCCAGGTACCCTCAACCACAAGCCCGATGCAAACCGCCGGGACAAACAAGTGGTTGATCTG GGGACTGGTAGGCGGAAGCGGGTGCTTACTCCTGATCTTGATCGGCATATGTGTATTCATTGCCGTATCAATCTTCGCGG TTGTCGACTCCGTGCCAACCAGCAGTTCGACTGAGGCAACGGCAACTACCGGGGACGGAGGTTCGCTGGCATCAGGGAGC AGCGGTAGGGTCTTGTTCAGTGATGATTTCGAGAATCCACAGGCCAGTGAACTGGGAGAGAGTGAAGATAGCAGTTCACG GTATGCCTACGAAGCAGGCCGGTATGTCATCGAAGTCAAAGAGCCAGAACTATTGGTCTGGGCGTTGGTGAATGGATCTT ACCGCGATGTCATTATTGAAACCAGCTATTCTACTGTTCGAGGGGGGCCGGTTGGCGCTGCGGGTATCATCTTCAATTAT CAGGACGAGGATAACTTTTATCTGTTCAGTGTGTCGAATGATGGGTATTACGCACTTGAGCTGTTGGAGAACAATCAGTG GATAACCCTGATCGATTGGACGCAGCACGAAGCGATTGACCCCGAAAATAATCGGCTCCGGGTTGAACTCAACGGCGATG AGATCACGCTGTTTGTAAATGATCGTCAGCTTGAACAGACCCGCGATCCAACATTTACGCGCGGTGACATTGGGCTGGCG GTCACCAGTTTTGATCAGAGTGGGATTACGGTGAGTTACGAGGAGATCACCATTCGCAGCCGGTAA
Upstream 100 bases:
>100_bases CTGCGGAAGAGAACCGTGTGTTTATTGAGGTACTACGCAATTTGATGTCAAAAGGTACCGTGGCAACAGCAACAATATCG TAGCACCCAAGGATGTAGAT
Downstream 100 bases:
>100_bases TATCAAATCTTGACCGACACTGTGCATTGGTCAGGTTGTCCTACTCATGCTGGAGAGTTGCCAGGCATGCCTCTTGCGCC ACCCCCTCGTATGGCAATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 501; Mature: 500
Protein sequence:
>501_residues MGDSPNPTFCASCGHKLTPEDRFCPECGARAPERPSAPAAGAPPTVVIPPGQAGAETSPEATAAPIFCMNCGRKLTPEDR FCPECGTRAPERPSPPATGAPPTVVIPPQQPTAGAAPTVIIPPDQPTPGAPPTVMIPPEQPATGAPPTVVIPPQQPTPGV PPTVIIPPEQPPAGAAPTVVIPPEQSPAGVPPVTPPPPQPSVGRTPASYPPPVIPPAQSAGTPPDPFMPPPVTPVSYGPP PAGTDPFQVPSTTSPMQTAGTNKWLIWGLVGGSGCLLLILIGICVFIAVSIFAVVDSVPTSSSTEATATTGDGGSLASGS SGRVLFSDDFENPQASELGESEDSSSRYAYEAGRYVIEVKEPELLVWALVNGSYRDVIIETSYSTVRGGPVGAAGIIFNY QDEDNFYLFSVSNDGYYALELLENNQWITLIDWTQHEAIDPENNRLRVELNGDEITLFVNDRQLEQTRDPTFTRGDIGLA VTSFDQSGITVSYEEITIRSR
Sequences:
>Translated_501_residues MGDSPNPTFCASCGHKLTPEDRFCPECGARAPERPSAPAAGAPPTVVIPPGQAGAETSPEATAAPIFCMNCGRKLTPEDR FCPECGTRAPERPSPPATGAPPTVVIPPQQPTAGAAPTVIIPPDQPTPGAPPTVMIPPEQPATGAPPTVVIPPQQPTPGV PPTVIIPPEQPPAGAAPTVVIPPEQSPAGVPPVTPPPPQPSVGRTPASYPPPVIPPAQSAGTPPDPFMPPPVTPVSYGPP PAGTDPFQVPSTTSPMQTAGTNKWLIWGLVGGSGCLLLILIGICVFIAVSIFAVVDSVPTSSSTEATATTGDGGSLASGS SGRVLFSDDFENPQASELGESEDSSSRYAYEAGRYVIEVKEPELLVWALVNGSYRDVIIETSYSTVRGGPVGAAGIIFNY QDEDNFYLFSVSNDGYYALELLENNQWITLIDWTQHEAIDPENNRLRVELNGDEITLFVNDRQLEQTRDPTFTRGDIGLA VTSFDQSGITVSYEEITIRSR >Mature_500_residues GDSPNPTFCASCGHKLTPEDRFCPECGARAPERPSAPAAGAPPTVVIPPGQAGAETSPEATAAPIFCMNCGRKLTPEDRF CPECGTRAPERPSPPATGAPPTVVIPPQQPTAGAAPTVIIPPDQPTPGAPPTVMIPPEQPATGAPPTVVIPPQQPTPGVP PTVIIPPEQPPAGAAPTVVIPPEQSPAGVPPVTPPPPQPSVGRTPASYPPPVIPPAQSAGTPPDPFMPPPVTPVSYGPPP AGTDPFQVPSTTSPMQTAGTNKWLIWGLVGGSGCLLLILIGICVFIAVSIFAVVDSVPTSSSTEATATTGDGGSLASGSS GRVLFSDDFENPQASELGESEDSSSRYAYEAGRYVIEVKEPELLVWALVNGSYRDVIIETSYSTVRGGPVGAAGIIFNYQ DEDNFYLFSVSNDGYYALELLENNQWITLIDWTQHEAIDPENNRLRVELNGDEITLFVNDRQLEQTRDPTFTRGDIGLAV TSFDQSGITVSYEEITIRSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52489; Mature: 52358
Theoretical pI: Translated: 4.01; Mature: 4.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDSPNPTFCASCGHKLTPEDRFCPECGARAPERPSAPAAGAPPTVVIPPGQAGAETSPE CCCCCCCCCHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC ATAAPIFCMNCGRKLTPEDRFCPECGTRAPERPSPPATGAPPTVVIPPQQPTAGAAPTVI CCCCCEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEE IPPDQPTPGAPPTVMIPPEQPATGAPPTVVIPPQQPTPGVPPTVIIPPEQPPAGAAPTVV ECCCCCCCCCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCEEE IPPEQSPAGVPPVTPPPPQPSVGRTPASYPPPVIPPAQSAGTPPDPFMPPPVTPVSYGPP ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAGTDPFQVPSTTSPMQTAGTNKWLIWGLVGGSGCLLLILIGICVFIAVSIFAVVDSVPT CCCCCCCCCCCCCCCHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCC SSSTEATATTGDGGSLASGSSGRVLFSDDFENPQASELGESEDSSSRYAYEAGRYVIEVK CCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCHHHCCCCCCCCCEEEEECCCEEEEEC EPELLVWALVNGSYRDVIIETSYSTVRGGPVGAAGIIFNYQDEDNFYLFSVSNDGYYALE CCCEEEEEEECCCEEEEEEECCCCEECCCCCCEEEEEEEEECCCCEEEEEECCCCEEEEE LLENNQWITLIDWTQHEAIDPENNRLRVELNGDEITLFVNDRQLEQTRDPTFTRGDIGLA EEECCCEEEEEECCCCCCCCCCCCEEEEEECCCEEEEEECCCHHHHHCCCCEEECCEEEE VTSFDQSGITVSYEEITIRSR EEEECCCCCEEEEEEEEEECC >Mature Secondary Structure GDSPNPTFCASCGHKLTPEDRFCPECGARAPERPSAPAAGAPPTVVIPPGQAGAETSPE CCCCCCCCHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC ATAAPIFCMNCGRKLTPEDRFCPECGTRAPERPSPPATGAPPTVVIPPQQPTAGAAPTVI CCCCCEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEE IPPDQPTPGAPPTVMIPPEQPATGAPPTVVIPPQQPTPGVPPTVIIPPEQPPAGAAPTVV ECCCCCCCCCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCEEE IPPEQSPAGVPPVTPPPPQPSVGRTPASYPPPVIPPAQSAGTPPDPFMPPPVTPVSYGPP ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAGTDPFQVPSTTSPMQTAGTNKWLIWGLVGGSGCLLLILIGICVFIAVSIFAVVDSVPT CCCCCCCCCCCCCCCHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCC SSSTEATATTGDGGSLASGSSGRVLFSDDFENPQASELGESEDSSSRYAYEAGRYVIEVK CCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCHHHCCCCCCCCCEEEEECCCEEEEEC EPELLVWALVNGSYRDVIIETSYSTVRGGPVGAAGIIFNYQDEDNFYLFSVSNDGYYALE CCCEEEEEEECCCEEEEEEECCCCEECCCCCCEEEEEEEEECCCCEEEEEECCCCEEEEE LLENNQWITLIDWTQHEAIDPENNRLRVELNGDEITLFVNDRQLEQTRDPTFTRGDIGLA EEECCCEEEEEECCCCCCCCCCCCEEEEEECCCEEEEEECCCHHHHHCCCCEEECCEEEE VTSFDQSGITVSYEEITIRSR EEEECCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA