| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524563
Identifier: 222524563
GI number: 222524563
Start: 1649430
End: 1650671
Strand: Direct
Name: 222524563
Synonym: Chy400_1287
Alternate gene names: NA
Gene position: 1649430-1650671 (Clockwise)
Preceding gene: 222524560
Following gene: 222524566
Centisome position: 31.3
GC content: 54.83
Gene sequence:
>1242_bases ATGTCCCTTACACACCGGTACTGGTTCATTTCGCTCATCGGCCTGTTACTCTTCGCCCTGACCGCATGTGGTGGTGGAGG GAGCGCCGCTCCTACTGCATCCCCAACCCAGGCGGCTGCCGCGCCCACACGCACGCCACGCCCTACCTTGCCTCCAGCCC AGCCGACGGCCACCCCGCGCCCCTCACCAACAGCCGCCAGCCAGAGTGGTCAGTTGGCGCTGGTCGATATTGGCCCACTT GAGACCTATCGGCACGCGAGTGGTGTTTTTCAGATCGATATTCCCAACAATTGGACACTAGAGGATAACAGCTCCCCAAC CGAGCTGTTACTGATCTGGACAGACCCGACCGGCAATGGGGCGATCTGGGTGAATATTGTTGAAGATAGCCGGAGCTATA CCGATCAGCAACTGGTCGATGCACTTACTTCATTTCTCGAAGAGCGCTTCGGTCAACAGCCAGATTTTGTCTACGAAGAT GCGCGTCCTCAGCGCGATGGTAGCCAGTTGGTAGCCTGGTCGTATACTGCCACGGCCGACAACAATGTGCGTTCAACCTT GCTGGGGAACAGCTTCATTGAGCAGCGGGGTGATAAGATTTCGATCCTTACCACTATGATACCGCAAGAGCAGTTTGAGA TACTGGACAGCAAAACTGACGCTATTATTAACACCTACCGCATTAACCCCTCCGCTTCCATTAGCGGCGGCTCAACAACC GGCGGTGAAACTGCCAGTGGCAGTGTACTGGCTCCAGTTCAGATTGGACAGTTGCAAACCTATAATCATCCATCCGGCGT GTTCAGGATCGATCTGCCGGAAAACTGGAGCCTGACCGATAACAGTCGCCCCGGCGAACTGATCCTGGTCTGGTCTGATC CAACAAACAATGCCGCGATCATCGTCAACGTGCTGGAAGACAGCACTACCTACAGCGATGATGAGCTGGTTGACAAGCTG GTGAGCTTCTTGCAATCGGCATTTGGCAGTCAATCCGACTTCTTCTACGAAGAGCCGCGACCGCAAAGTGATGGCAGTAT CCTGGTCGTGTGGGGGTATACCGCAACGGTTTCCGACAACGTGCAGGCACCAATGTTGGGGAATAGTTTCATAGAGCAGC GTGGCAACAAGCTCTCGGTGTTGACAACCCTGGTTCCTGAAGATCAATTCGATACGCTGGTCAGCCGCACCGACGAGATT ATCAACACTTATCGTCTCGACCCGAACGCCAGTGTGCCATAA
Upstream 100 bases:
>100_bases TGCACCCATAGCACGTACATGCATCTGAGACTCCTCCTGCACGCTACACAGCACAGAGTCGTTGTCCATCACGGTTCACA GTATTTTGAAGGGAGGTTGT
Downstream 100 bases:
>100_bases GCCAGGGCAATACGAGTTTCTGCCAAAGAGAGGGGCCACTGTTTGTTGTGGCCCCTCTCAGCGTGTCTATTTAACCTTTC GCCACTGCGTAGTGCCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MSLTHRYWFISLIGLLLFALTACGGGGSAAPTASPTQAAAAPTRTPRPTLPPAQPTATPRPSPTAASQSGQLALVDIGPL ETYRHASGVFQIDIPNNWTLEDNSSPTELLLIWTDPTGNGAIWVNIVEDSRSYTDQQLVDALTSFLEERFGQQPDFVYED ARPQRDGSQLVAWSYTATADNNVRSTLLGNSFIEQRGDKISILTTMIPQEQFEILDSKTDAIINTYRINPSASISGGSTT GGETASGSVLAPVQIGQLQTYNHPSGVFRIDLPENWSLTDNSRPGELILVWSDPTNNAAIIVNVLEDSTTYSDDELVDKL VSFLQSAFGSQSDFFYEEPRPQSDGSILVVWGYTATVSDNVQAPMLGNSFIEQRGNKLSVLTTLVPEDQFDTLVSRTDEI INTYRLDPNASVP
Sequences:
>Translated_413_residues MSLTHRYWFISLIGLLLFALTACGGGGSAAPTASPTQAAAAPTRTPRPTLPPAQPTATPRPSPTAASQSGQLALVDIGPL ETYRHASGVFQIDIPNNWTLEDNSSPTELLLIWTDPTGNGAIWVNIVEDSRSYTDQQLVDALTSFLEERFGQQPDFVYED ARPQRDGSQLVAWSYTATADNNVRSTLLGNSFIEQRGDKISILTTMIPQEQFEILDSKTDAIINTYRINPSASISGGSTT GGETASGSVLAPVQIGQLQTYNHPSGVFRIDLPENWSLTDNSRPGELILVWSDPTNNAAIIVNVLEDSTTYSDDELVDKL VSFLQSAFGSQSDFFYEEPRPQSDGSILVVWGYTATVSDNVQAPMLGNSFIEQRGNKLSVLTTLVPEDQFDTLVSRTDEI INTYRLDPNASVP >Mature_412_residues SLTHRYWFISLIGLLLFALTACGGGGSAAPTASPTQAAAAPTRTPRPTLPPAQPTATPRPSPTAASQSGQLALVDIGPLE TYRHASGVFQIDIPNNWTLEDNSSPTELLLIWTDPTGNGAIWVNIVEDSRSYTDQQLVDALTSFLEERFGQQPDFVYEDA RPQRDGSQLVAWSYTATADNNVRSTLLGNSFIEQRGDKISILTTMIPQEQFEILDSKTDAIINTYRINPSASISGGSTTG GETASGSVLAPVQIGQLQTYNHPSGVFRIDLPENWSLTDNSRPGELILVWSDPTNNAAIIVNVLEDSTTYSDDELVDKLV SFLQSAFGSQSDFFYEEPRPQSDGSILVVWGYTATVSDNVQAPMLGNSFIEQRGNKLSVLTTLVPEDQFDTLVSRTDEII NTYRLDPNASVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44883; Mature: 44752
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTHRYWFISLIGLLLFALTACGGGGSAAPTASPTQAAAAPTRTPRPTLPPAQPTATPR CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC PSPTAASQSGQLALVDIGPLETYRHASGVFQIDIPNNWTLEDNSSPTELLLIWTDPTGNG CCCCCCCCCCCEEEEECCCCHHHHHCCCEEEEECCCCEEECCCCCCCEEEEEEECCCCCC AIWVNIVEDSRSYTDQQLVDALTSFLEERFGQQPDFVYEDARPQRDGSQLVAWSYTATAD EEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEEEEECCC NNVRSTLLGNSFIEQRGDKISILTTMIPQEQFEILDSKTDAIINTYRINPSASISGGSTT CCHHHHHHCCHHHHHCCCEEEEEEECCCHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCC GGETASGSVLAPVQIGQLQTYNHPSGVFRIDLPENWSLTDNSRPGELILVWSDPTNNAAI CCCCCCCCEEEEEEECCEEECCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEE IVNVLEDSTTYSDDELVDKLVSFLQSAFGSQSDFFYEEPRPQSDGSILVVWGYTATVSDN EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC VQAPMLGNSFIEQRGNKLSVLTTLVPEDQFDTLVSRTDEIINTYRLDPNASVP CCCCCCCCHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHEEECCCCCCCC >Mature Secondary Structure SLTHRYWFISLIGLLLFALTACGGGGSAAPTASPTQAAAAPTRTPRPTLPPAQPTATPR CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC PSPTAASQSGQLALVDIGPLETYRHASGVFQIDIPNNWTLEDNSSPTELLLIWTDPTGNG CCCCCCCCCCCEEEEECCCCHHHHHCCCEEEEECCCCEEECCCCCCCEEEEEEECCCCCC AIWVNIVEDSRSYTDQQLVDALTSFLEERFGQQPDFVYEDARPQRDGSQLVAWSYTATAD EEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEEEEECCC NNVRSTLLGNSFIEQRGDKISILTTMIPQEQFEILDSKTDAIINTYRINPSASISGGSTT CCHHHHHHCCHHHHHCCCEEEEEEECCCHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCC GGETASGSVLAPVQIGQLQTYNHPSGVFRIDLPENWSLTDNSRPGELILVWSDPTNNAAI CCCCCCCCEEEEEEECCEEECCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEE IVNVLEDSTTYSDDELVDKLVSFLQSAFGSQSDFFYEEPRPQSDGSILVVWGYTATVSDN EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC VQAPMLGNSFIEQRGNKLSVLTTLVPEDQFDTLVSRTDEIINTYRLDPNASVP CCCCCCCCHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA