Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is asd [H]
Identifier: 222523525
GI number: 222523525
Start: 276684
End: 277733
Strand: Reverse
Name: asd [H]
Synonym: Chy400_0231
Alternate gene names: 222523525
Gene position: 277733-276684 (Counterclockwise)
Preceding gene: 222523527
Following gene: 222523524
Centisome position: 5.27
GC content: 56.86
Gene sequence:
>1050_bases ATGGCAACAATTCCGGTTGCAGTGCTTGGTGCCACCGGTGCAGTGGGCCAGCGCTTTATTCAATTACTCGAAGGACATCC ATTGTTTCAGGTTGTTGCATTGACCGGTAGCGAGCGCAGTGCAGGGAAGAAATATCACGAAGTGTGCCGATGGGTACTCG ACACCCCGATGCCGGCAGCCGTCGCCAATCTCACCGTGCTCGATGCCGATGCCGATCTACCGGCTCAGCTCGTCTTTTCT GCTCTCCCCAGCACGGTCGCCGGCCCGATTGAACAGCGTCTGGCAGCAGCCGGGCATATTGTCTGCTCCAATGCTTCGAA TCATCGCATGGAGCCGGATGTACCTCTGATTATTCCTGAAGTGAATCCCGATCATCTGGCCCTGATTCCGGTACAGCGCC GGCGCCGTGGTTGGTCAGGGGCGATTGTGACCAATCCTAACTGTACGTCCACGCCGGCAACGATGGTCTTACGCCCACTG CTTGATACGTTTGGCGTGCGGCGGATGCTGTTGGTAAGTATGCAGGCTCTCTCTGGTGCAGGCTATCCGGGTGTGCCCAG CTACGATGTGGTTGACAATGTCATCCCCTATATCGGTGGGGAAGAGCCAAAACTGGAAATTGAACCTCAAAAGATGCTCG GTCGGTTAGAGGGGGAGACGATTGTGCCGGCTGGGTTCACGACCTCAGCCCATTGCAATCGGGTACCGGTGTTAGAGGGA CATCTGGTCTGTCTCTCAATTGAGCTGGAGCGCAAAGCTGATCCGGCAGAGATTGCGACGGTGCTAAGTAATTTCCGTGC TCTACCCCAGGAATTGCGGCTGCCTACCGCACCAGAGCAACCGATTATCGTGCGCCACGAGCCGGATCGGCCACAGCCAC GCCGTGATCGCGATGCCGGACGTGGTATGGCAACGGTTGTGGGCCGCATCCGTCCATGCTCATTGTTCGATATCAAGCTG ATTGCACTGAGTCACAATACAATTCGTGGCGCCGCCGGTGCCTCTATTCTCAATGCCGAATTGATGCACGCACAGGGGTG GCTGGCATGA
Upstream 100 bases:
>100_bases AACTTTGGTGAGCAAATTACAACAGATTTTGTTGTGTATGCAACTGTTCAGAAGCGGGTATAATGTGGGGTGACAATGTG CTATCGCCAGGAGGTTACAG
Downstream 100 bases:
>100_bases GTGCCTGGGCAACGATTGCTGATCTGACCGAAGATCGCGTCATTTATCGCGATTTACAACCTTGCGATGCCAGCTTGCCC GGCTTGCCGGCACTGCGCAC
Product: aspartate-semialdehyde dehydrogenase
Products: NA
Alternate protein names: ASA dehydrogenase; ASADH [H]
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MATIPVAVLGATGAVGQRFIQLLEGHPLFQVVALTGSERSAGKKYHEVCRWVLDTPMPAAVANLTVLDADADLPAQLVFS ALPSTVAGPIEQRLAAAGHIVCSNASNHRMEPDVPLIIPEVNPDHLALIPVQRRRRGWSGAIVTNPNCTSTPATMVLRPL LDTFGVRRMLLVSMQALSGAGYPGVPSYDVVDNVIPYIGGEEPKLEIEPQKMLGRLEGETIVPAGFTTSAHCNRVPVLEG HLVCLSIELERKADPAEIATVLSNFRALPQELRLPTAPEQPIIVRHEPDRPQPRRDRDAGRGMATVVGRIRPCSLFDIKL IALSHNTIRGAAGASILNAELMHAQGWLA
Sequences:
>Translated_349_residues MATIPVAVLGATGAVGQRFIQLLEGHPLFQVVALTGSERSAGKKYHEVCRWVLDTPMPAAVANLTVLDADADLPAQLVFS ALPSTVAGPIEQRLAAAGHIVCSNASNHRMEPDVPLIIPEVNPDHLALIPVQRRRRGWSGAIVTNPNCTSTPATMVLRPL LDTFGVRRMLLVSMQALSGAGYPGVPSYDVVDNVIPYIGGEEPKLEIEPQKMLGRLEGETIVPAGFTTSAHCNRVPVLEG HLVCLSIELERKADPAEIATVLSNFRALPQELRLPTAPEQPIIVRHEPDRPQPRRDRDAGRGMATVVGRIRPCSLFDIKL IALSHNTIRGAAGASILNAELMHAQGWLA >Mature_348_residues ATIPVAVLGATGAVGQRFIQLLEGHPLFQVVALTGSERSAGKKYHEVCRWVLDTPMPAAVANLTVLDADADLPAQLVFSA LPSTVAGPIEQRLAAAGHIVCSNASNHRMEPDVPLIIPEVNPDHLALIPVQRRRRGWSGAIVTNPNCTSTPATMVLRPLL DTFGVRRMLLVSMQALSGAGYPGVPSYDVVDNVIPYIGGEEPKLEIEPQKMLGRLEGETIVPAGFTTSAHCNRVPVLEGH LVCLSIELERKADPAEIATVLSNFRALPQELRLPTAPEQPIIVRHEPDRPQPRRDRDAGRGMATVVGRIRPCSLFDIKLI ALSHNTIRGAAGASILNAELMHAQGWLA
Specific function: This enzyme catalyzes the second step in the common metabolic pathway to synthesize Thr and Met from Asp [H]
COG id: COG0136
COG function: function code E; Aspartate-semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate-semialdehyde dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788658, Length=304, Percent_Identity=25, Blast_Score=65, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6320362, Length=358, Percent_Identity=41.0614525139665, Blast_Score=263, Evalue=3e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000319 - InterPro: IPR005676 - InterPro: IPR012080 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 [H]
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC [H]
EC number: =1.2.1.11 [H]
Molecular weight: Translated: 37563; Mature: 37432
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIPVAVLGATGAVGQRFIQLLEGHPLFQVVALTGSERSAGKKYHEVCRWVLDTPMPAA CCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHH VANLTVLDADADLPAQLVFSALPSTVAGPIEQRLAAAGHIVCSNASNHRMEPDVPLIIPE HHEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCEEEEC VNPDHLALIPVQRRRRGWSGAIVTNPNCTSTPATMVLRPLLDTFGVRRMLLVSMQALSGA CCCCCEEEEEHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GYPGVPSYDVVDNVIPYIGGEEPKLEIEPQKMLGRLEGETIVPAGFTTSAHCNRVPVLEG CCCCCCCHHHHHHHHHHCCCCCCCEEECHHHHHHHCCCCEEECCCCCCCCCCCCCCEECC HLVCLSIELERKADPAEIATVLSNFRALPQELRLPTAPEQPIIVRHEPDRPQPRRDRDAG CEEEEEEEECCCCCHHHHHHHHHHHHHCHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHC RGMATVVGRIRPCSLFDIKLIALSHNTIRGAAGASILNAELMHAQGWLA CCHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure ATIPVAVLGATGAVGQRFIQLLEGHPLFQVVALTGSERSAGKKYHEVCRWVLDTPMPAA CCCCEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHH VANLTVLDADADLPAQLVFSALPSTVAGPIEQRLAAAGHIVCSNASNHRMEPDVPLIIPE HHEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCEEEEC VNPDHLALIPVQRRRRGWSGAIVTNPNCTSTPATMVLRPLLDTFGVRRMLLVSMQALSGA CCCCCEEEEEHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GYPGVPSYDVVDNVIPYIGGEEPKLEIEPQKMLGRLEGETIVPAGFTTSAHCNRVPVLEG CCCCCCCHHHHHHHHHHCCCCCCCEEECHHHHHHHCCCCEEECCCCCCCCCCCCCCEECC HLVCLSIELERKADPAEIATVLSNFRALPQELRLPTAPEQPIIVRHEPDRPQPRRDRDAG CEEEEEEEECCCCCHHHHHHHHHHHHHCHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHC RGMATVVGRIRPCSLFDIKLIALSHNTIRGAAGASILNAELMHAQGWLA CCHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]