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The map label for this gene is yoaJ [H]

Identifier: 222523527

GI number: 222523527

Start: 278641

End: 279417

Strand: Reverse

Name: yoaJ [H]

Synonym: Chy400_0233

Alternate gene names: 222523527

Gene position: 279417-278641 (Counterclockwise)

Preceding gene: 222523528

Following gene: 222523525

Centisome position: 5.3

GC content: 53.15

Gene sequence:

>777_bases
ATGCAATGGTCTGCCGGAAGGTTACAGATCGCTCTCGTAATCTGCCTGACAGGGTTTTTCTGGCTTATTGCCAACCCAGT
CTTTACCCAACCTCCGTATCGTGTTCATCTGCCTTTAGTGGTACGTCCGGCCCAAAATCCACTGCTGAGCGGTGAAGCTA
CCTTCTATCTCGAAGCCGATGGCAGCGGGAGTTGTCTATTTGATCCCATTCCAGGCGATAAGATGGTTGCCGCGATCAGC
TACCTCAATTACGGAAATGCCGATTACTGCGGTGCGTATGTTGAGGTCTTCGGGCCGCAAGGTAGTGTCGTGGTACGGAT
TGTTGATATGTGCCCGGACAACCCCGGTTGTGGGCAAAACCATCTCGATCTCAGCCCCGAAGCCTTTGATCGCATTGCCC
CACGCGCCTGGGGAAGAGTTCCGATCACCTGGCGTGTGATCAGTCCACCACTTAGCGGGCCGGTGCAATTTCATCTTAAG
GATGGCAGTAATCCGTGGTGGCTGGCATTTCAGGTTCGCCATCATCGTAATCCGATTGCCCGCATGGAATATCGTACACC
CCAGGGACAATGGGTACAACTGAACCGAACCACATACAACTATTTCATCAGACAGTGTCAGTGTGCCAATGGCGAACTCG
GCCCCTTTACCCTACGCATAACTGACATCTACGGTAATGTACTGACCGAGACGGTACAGTTTACGACGCTATCACGGAGC
AGTAATTCGCCAGGTGAACTGGTGAGCGGGACGGGTCAGTTTCCTTACGGGCCGTAG

Upstream 100 bases:

>100_bases
CCGCAGAGACGAAGCATGGTTTTGTCTCTGCGGTAGACGGTGACTTCTATCCGATGCTCCTCAGCACACTGGTCATGGGA
GGGGTTGAAAGAGGTTCTGC

Downstream 100 bases:

>100_bases
GTTACAGACTATGCCTCATCCTCTGCTGATCGCTGGAGACAATATGTCGTATGGGAATGCAGATAAGAACAACACCTTTA
CCTTATCGGTAAGAGGTGTT

Product: Rare lipoprotein A

Products: NA

Alternate protein names: EXLX1 [H]

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MQWSAGRLQIALVICLTGFFWLIANPVFTQPPYRVHLPLVVRPAQNPLLSGEATFYLEADGSGSCLFDPIPGDKMVAAIS
YLNYGNADYCGAYVEVFGPQGSVVVRIVDMCPDNPGCGQNHLDLSPEAFDRIAPRAWGRVPITWRVISPPLSGPVQFHLK
DGSNPWWLAFQVRHHRNPIARMEYRTPQGQWVQLNRTTYNYFIRQCQCANGELGPFTLRITDIYGNVLTETVQFTTLSRS
SNSPGELVSGTGQFPYGP

Sequences:

>Translated_258_residues
MQWSAGRLQIALVICLTGFFWLIANPVFTQPPYRVHLPLVVRPAQNPLLSGEATFYLEADGSGSCLFDPIPGDKMVAAIS
YLNYGNADYCGAYVEVFGPQGSVVVRIVDMCPDNPGCGQNHLDLSPEAFDRIAPRAWGRVPITWRVISPPLSGPVQFHLK
DGSNPWWLAFQVRHHRNPIARMEYRTPQGQWVQLNRTTYNYFIRQCQCANGELGPFTLRITDIYGNVLTETVQFTTLSRS
SNSPGELVSGTGQFPYGP
>Mature_258_residues
MQWSAGRLQIALVICLTGFFWLIANPVFTQPPYRVHLPLVVRPAQNPLLSGEATFYLEADGSGSCLFDPIPGDKMVAAIS
YLNYGNADYCGAYVEVFGPQGSVVVRIVDMCPDNPGCGQNHLDLSPEAFDRIAPRAWGRVPITWRVISPPLSGPVQFHLK
DGSNPWWLAFQVRHHRNPIARMEYRTPQGQWVQLNRTTYNYFIRQCQCANGELGPFTLRITDIYGNVLTETVQFTTLSRS
SNSPGELVSGTGQFPYGP

Specific function: May promote colonization of plant roots. May cause loosening and extension of plant cell walls by disrupting non- covalent bonding between cellulose microfibrils and matrix glucans. Has very low expansin activity (in vitro). No enzymatic activity has been

COG id: COG4305

COG function: function code G; Endoglucanase C-terminal domain/subunit and related proteins

Gene ontology:

Cell location: Secreted, cell wall [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 expansin-like EG45 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR007117 [H]

Pfam domain/function: PF03330 DPBB_1 [H]

EC number: NA

Molecular weight: Translated: 28752; Mature: 28752

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQWSAGRLQIALVICLTGFFWLIANPVFTQPPYRVHLPLVVRPAQNPLLSGEATFYLEAD
CCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCEECCCEEEEEEEC
GSGSCLFDPIPGDKMVAAISYLNYGNADYCGAYVEVFGPQGSVVVRIVDMCPDNPGCGQN
CCCCEEECCCCCCHHEEEEEHHCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCC
HLDLSPEAFDRIAPRAWGRVPITWRVISPPLSGPVQFHLKDGSNPWWLAFQVRHHRNPIA
CCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEEEEECCCCCC
RMEYRTPQGQWVQLNRTTYNYFIRQCQCANGELGPFTLRITDIYGNVLTETVQFTTLSRS
EEEEECCCCCEEEEECCCCEEHHEEEECCCCCCCEEEEEEEEHHHHHHHHEEEEEEEECC
SNSPGELVSGTGQFPYGP
CCCCCCEEECCCCCCCCC
>Mature Secondary Structure
MQWSAGRLQIALVICLTGFFWLIANPVFTQPPYRVHLPLVVRPAQNPLLSGEATFYLEAD
CCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCEECCCEEEEEEEC
GSGSCLFDPIPGDKMVAAISYLNYGNADYCGAYVEVFGPQGSVVVRIVDMCPDNPGCGQN
CCCCEEECCCCCCHHEEEEEHHCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCC
HLDLSPEAFDRIAPRAWGRVPITWRVISPPLSGPVQFHLKDGSNPWWLAFQVRHHRNPIA
CCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEEEEECCCCCC
RMEYRTPQGQWVQLNRTTYNYFIRQCQCANGELGPFTLRITDIYGNVLTETVQFTTLSRS
EEEEECCCCCEEEEECCCCEEHHEEEECCCCCCCEEEEEEEEHHHHHHHHEEEEEEEECC
SNSPGELVSGTGQFPYGP
CCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]