Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
---|---|
Accession | NC_012032 |
Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222523524
Identifier: 222523524
GI number: 222523524
Start: 275635
End: 276687
Strand: Reverse
Name: 222523524
Synonym: Chy400_0230
Alternate gene names: NA
Gene position: 276687-275635 (Counterclockwise)
Preceding gene: 222523525
Following gene: 222523522
Centisome position: 5.25
GC content: 58.31
Gene sequence:
>1053_bases ATGAGTGCCTGGGCAACGATTGCTGATCTGACCGAAGATCGCGTCATTTATCGCGATTTACAACCTTGCGATGCCAGCTT GCCCGGCTTGCCGGCACTGCGCACGCTTCTCGGCTTACCTGCCAATGCAACGCCGCGGAAGCGTGATACGGCGTATGCGC GGGTCATTCTGGCACTGGCACGTGCTGCTCAGGCGTTGCGGAATGGGCCACCGCTGACACACGTTGTTGTGATCGGGGAT ACCGAGAATGATCGACTCTTGACCCTGCACCTCCAGGCGCTTGCCGAGGTCGCTGCATATGGCTTCATCGGTGTTGATCG CCCGGTTGCACCGGCGACGCTCGATTGGGAGGGCGTGGTGGCAACAGCGACCCGTTGGGCGCTTGTGCACGAGTGGGCAG CCACGTTGACGGCTCGTGGGGTTCCGTGGGCGCAGACTGCGGTGTTAATCGATATCGATAAGACCTTGCTGGGGCCACGT GGGCGTTCTGACGGAGCGATTGACGATGCACGGGCTGAAGCGGCCCTGATCGTAGCAACGGATTTATTAGGGGATCGGTT TGATCGCACCGTTTTTCGTCAATACTACACCACTTTGTGTCGCCGCGAATGGCACGCAATTACGCTCGATAATCAAGACT ATACCGTGGCGATGGCTCTCTTCGCCACAGTTGATGTGTTCGATCTACCGGCAATTGAAGTGCAATTAGCAGCCGGGCTA TCACCAACGCTGCTCGAATTGCTGATCGCTGCTCAGCAGGTGCCGGTTGAGTTGCAGGCATTACGCCGGCAATTGATCGA GCAGATTGAGGCCGGTAACCCTACACCGTTCACCCAGTTTCGACGGGCTGAACTGGTCACGACCGCGGCGCGTATGGCAG ATGGACGGTTGACGTTGAGTAATGAGCTGTTTACGCTGGGACGACGGCTACAGGCGCAGGGTGCTCTCTTAATGGCCGCC TCGGATAAACCGGCTGAATCTGCGTTACCCTCTCCTGAACAACAGACCGCCGGTCTGCTGCCGCTTCACCGGACACCTGC ACTGCTGGATTGA
Upstream 100 bases:
>100_bases TCGATATCAAGCTGATTGCACTGAGTCACAATACAATTCGTGGCGCCGCCGGTGCCTCTATTCTCAATGCCGAATTGATG CACGCACAGGGGTGGCTGGC
Downstream 100 bases:
>100_bases GATGTAACGGGGCAACCGCCAGGGTTGCCCCGATGAGCGCTATTGAGCCTTTTGCGAGGTTGCAGGTAGTTGGTGACGGA AACTAACCGTTAATAATCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MSAWATIADLTEDRVIYRDLQPCDASLPGLPALRTLLGLPANATPRKRDTAYARVILALARAAQALRNGPPLTHVVVIGD TENDRLLTLHLQALAEVAAYGFIGVDRPVAPATLDWEGVVATATRWALVHEWAATLTARGVPWAQTAVLIDIDKTLLGPR GRSDGAIDDARAEAALIVATDLLGDRFDRTVFRQYYTTLCRREWHAITLDNQDYTVAMALFATVDVFDLPAIEVQLAAGL SPTLLELLIAAQQVPVELQALRRQLIEQIEAGNPTPFTQFRRAELVTTAARMADGRLTLSNELFTLGRRLQAQGALLMAA SDKPAESALPSPEQQTAGLLPLHRTPALLD
Sequences:
>Translated_350_residues MSAWATIADLTEDRVIYRDLQPCDASLPGLPALRTLLGLPANATPRKRDTAYARVILALARAAQALRNGPPLTHVVVIGD TENDRLLTLHLQALAEVAAYGFIGVDRPVAPATLDWEGVVATATRWALVHEWAATLTARGVPWAQTAVLIDIDKTLLGPR GRSDGAIDDARAEAALIVATDLLGDRFDRTVFRQYYTTLCRREWHAITLDNQDYTVAMALFATVDVFDLPAIEVQLAAGL SPTLLELLIAAQQVPVELQALRRQLIEQIEAGNPTPFTQFRRAELVTTAARMADGRLTLSNELFTLGRRLQAQGALLMAA SDKPAESALPSPEQQTAGLLPLHRTPALLD >Mature_349_residues SAWATIADLTEDRVIYRDLQPCDASLPGLPALRTLLGLPANATPRKRDTAYARVILALARAAQALRNGPPLTHVVVIGDT ENDRLLTLHLQALAEVAAYGFIGVDRPVAPATLDWEGVVATATRWALVHEWAATLTARGVPWAQTAVLIDIDKTLLGPRG RSDGAIDDARAEAALIVATDLLGDRFDRTVFRQYYTTLCRREWHAITLDNQDYTVAMALFATVDVFDLPAIEVQLAAGLS PTLLELLIAAQQVPVELQALRRQLIEQIEAGNPTPFTQFRRAELVTTAARMADGRLTLSNELFTLGRRLQAQGALLMAAS DKPAESALPSPEQQTAGLLPLHRTPALLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38025; Mature: 37894
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAWATIADLTEDRVIYRDLQPCDASLPGLPALRTLLGLPANATPRKRDTAYARVILALA CCCHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH RAAQALRNGPPLTHVVVIGDTENDRLLTLHLQALAEVAAYGFIGVDRPVAPATLDWEGVV HHHHHHHCCCCEEEEEEEECCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCEECCCCEE ATATRWALVHEWAATLTARGVPWAQTAVLIDIDKTLLGPRGRSDGAIDDARAEAALIVAT HHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEEHHHHCCCCCCCCCCCCHHHCCEEEEEEH DLLGDRFDRTVFRQYYTTLCRREWHAITLDNQDYTVAMALFATVDVFDLPAIEVQLAAGL HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEHHHHHHHHHHHCCCCEEEEEECCC SPTLLELLIAAQQVPVELQALRRQLIEQIEAGNPTPFTQFRRAELVTTAARMADGRLTLS CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEC NELFTLGRRLQAQGALLMAASDKPAESALPSPEQQTAGLLPLHRTPALLD HHHHHHHHHHHHCCEEEEEECCCCHHHCCCCCCHHHCCCCCCCCCCCCCC >Mature Secondary Structure SAWATIADLTEDRVIYRDLQPCDASLPGLPALRTLLGLPANATPRKRDTAYARVILALA CCHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH RAAQALRNGPPLTHVVVIGDTENDRLLTLHLQALAEVAAYGFIGVDRPVAPATLDWEGVV HHHHHHHCCCCEEEEEEEECCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCEECCCCEE ATATRWALVHEWAATLTARGVPWAQTAVLIDIDKTLLGPRGRSDGAIDDARAEAALIVAT HHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEEHHHHCCCCCCCCCCCCHHHCCEEEEEEH DLLGDRFDRTVFRQYYTTLCRREWHAITLDNQDYTVAMALFATVDVFDLPAIEVQLAAGL HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEHHHHHHHHHHHCCCCEEEEEECCC SPTLLELLIAAQQVPVELQALRRQLIEQIEAGNPTPFTQFRRAELVTTAARMADGRLTLS CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEC NELFTLGRRLQAQGALLMAASDKPAESALPSPEQQTAGLLPLHRTPALLD HHHHHHHHHHHHCCEEEEEECCCCHHHCCCCCCHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA