Click here to switch to the map view.

The map label for this gene is ywqD [H]

Identifier: 222523413

GI number: 222523413

Start: 144163

End: 144801

Strand: Direct

Name: ywqD [H]

Synonym: Chy400_0115

Alternate gene names: 222523413

Gene position: 144163-144801 (Clockwise)

Preceding gene: 222523412

Following gene: 222523414

Centisome position: 2.74

GC content: 60.88

Gene sequence:

>639_bases
GTGACCTCGTCGTCTGAGCAGGTGCTGATTACCTTGCGCGAACCGGCGTCTGCCGCTGCGGAAGCATATCGCACCCTTCG
TACCAATATTCTCTTTTCGAGTCTTGACAAACCAATTCACACTCTGTTGATCACATCAGCCGAACCGACCCCGGAAAAGA
GTCTGACCGCAGCGAATCTGGCCGTCACGATGGCCCAGGCCGAACAGCGCGTGTTGCTGGTCGATTGCGATCTGCGCCAG
CCGATGCTGCACACGATCTTTGGGCTGGCCAACGAGCAGGGACTGACCAGCGCCATCCTTGACCAGGAAGCACCGCTGGC
GATCCAGCCTACTGAGGTGCCAGGGTTGAGCCTGCTCCCAAGTGGCCCGCTTCCACCCCGTCCTGCTGATCTCCTCGGTT
CACGGCGTATGGAAGGGCTGTTGCACCGTCTGCGCCAGGCCGCCGACATTGTCATCTTCGACACCCCGCCGGTGCAGAAC
GTGACCGATGCGCTGGTGCTATCTACCCGTGTCGATGGGGTACTCCTGGTGGTGCAGGCCGGTCGCTCGCGCCGTGATCG
CGTGCGCGAGGCCCGTCAAAAACTTGAGAAGGTGAAAGCCAACCTCCTCGGCGTTGTGCTTAGCAATGCTCGCCTGTGA

Upstream 100 bases:

>100_bases
TATTCCGCTTAGCGAACGGTAGTAACTCGTCAGTCCGGCCATCTTGTTGCGAGAGTGTAACCCGCGCTATGCATTGGGTT
TGAAGGTAGGAGTCATGATC

Downstream 100 bases:

>100_bases
GGTGTATCGCGACAGAAACATCGATACCGTCTCTACCGCGTGAACAGTCAGTATTCGTGCGAGGATGTATGCAACCAACC
ATTCTCGTTGTCGATGACGA

Product: capsular exopolysaccharide family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MTSSSEQVLITLREPASAAAEAYRTLRTNILFSSLDKPIHTLLITSAEPTPEKSLTAANLAVTMAQAEQRVLLVDCDLRQ
PMLHTIFGLANEQGLTSAILDQEAPLAIQPTEVPGLSLLPSGPLPPRPADLLGSRRMEGLLHRLRQAADIVIFDTPPVQN
VTDALVLSTRVDGVLLVVQAGRSRRDRVREARQKLEKVKANLLGVVLSNARL

Sequences:

>Translated_212_residues
MTSSSEQVLITLREPASAAAEAYRTLRTNILFSSLDKPIHTLLITSAEPTPEKSLTAANLAVTMAQAEQRVLLVDCDLRQ
PMLHTIFGLANEQGLTSAILDQEAPLAIQPTEVPGLSLLPSGPLPPRPADLLGSRRMEGLLHRLRQAADIVIFDTPPVQN
VTDALVLSTRVDGVLLVVQAGRSRRDRVREARQKLEKVKANLLGVVLSNARL
>Mature_211_residues
TSSSEQVLITLREPASAAAEAYRTLRTNILFSSLDKPIHTLLITSAEPTPEKSLTAANLAVTMAQAEQRVLLVDCDLRQP
MLHTIFGLANEQGLTSAILDQEAPLAIQPTEVPGLSLLPSGPLPPRPADLLGSRRMEGLLHRLRQAADIVIFDTPPVQNV
TDALVLSTRVDGVLLVVQAGRSRRDRVREARQKLEKVKANLLGVVLSNARL

Specific function: May be involved in the regulation of capsular polysaccharide biosynthesis. Autophosphorylates in vitro. Phosphorylates and activates in vitro two UDP-glucose dehydrogenases, YwqF and TuaD, as well as the DNA-binding proteins Ssb and SsbB [H]

COG id: COG0489

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsD/CapB family [H]

Homologues:

Organism=Escherichia coli, GI1787216, Length=201, Percent_Identity=34.8258706467662, Blast_Score=124, Evalue=4e-30,
Organism=Escherichia coli, GI87082032, Length=202, Percent_Identity=32.1782178217822, Blast_Score=122, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR005702 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: =2.7.10.2 [H]

Molecular weight: Translated: 23001; Mature: 22870

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSSEQVLITLREPASAAAEAYRTLRTNILFSSLDKPIHTLLITSAEPTPEKSLTAANL
CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHH
AVTMAQAEQRVLLVDCDLRQPMLHTIFGLANEQGLTSAILDQEAPLAIQPTEVPGLSLLP
HHHEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCHHHHHCCCCCCEECCCCCCCCCCCC
SGPLPPRPADLLGSRRMEGLLHRLRQAADIVIFDTPPVQNVTDALVLSTRVDGVLLVVQA
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHCCCCEEEEEEC
GRSRRDRVREARQKLEKVKANLLGVVLSNARL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TSSSEQVLITLREPASAAAEAYRTLRTNILFSSLDKPIHTLLITSAEPTPEKSLTAANL
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHH
AVTMAQAEQRVLLVDCDLRQPMLHTIFGLANEQGLTSAILDQEAPLAIQPTEVPGLSLLP
HHHEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCHHHHHCCCCCCEECCCCCCCCCCCC
SGPLPPRPADLLGSRRMEGLLHRLRQAADIVIFDTPPVQNVTDALVLSTRVDGVLLVVQA
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHCCCCEEEEEEC
GRSRRDRVREARQKLEKVKANLLGVVLSNARL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]