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The map label for this gene is capA [H]

Identifier: 222523412

GI number: 222523412

Start: 143431

End: 144084

Strand: Direct

Name: capA [H]

Synonym: Chy400_0114

Alternate gene names: 222523412

Gene position: 143431-144084 (Clockwise)

Preceding gene: 222523411

Following gene: 222523413

Centisome position: 2.72

GC content: 57.49

Gene sequence:

>654_bases
ATGGAAATCCGCGACTATGTAAATGTCCTGGTAAAACGCTGGTGGGTAATCGTTCTCACCGCCATCGCCGCCGTGGGCAG
TGCCTATGTGATCAGCAAGTTACTCCCGCAAACCTATCGCTCGCAGGCGGTCTATCTGGCGCTGGCCAATCAGGCCGACA
ACGGCCTGAACATTGTGCTGCGCAATTCGATGAACAGCTACCGCGAGCTGGTGATGCAACCCAGCGTGCTCGACCAGATC
AGCCAGCAGATCGGGCTTGACATCAGCGGTGAACGGTTAATGGAAGATGTCAACATCCAGCCGCGTCCTGACGAGCAGAA
GATCGTGATCGAGGTCGATTTACCCCGTCTCGATCAATCGCAGGCGCTGGCCGATGCCGTGGGCGAACGGATCGTCGCCG
AAGTAAATCGAATTAACGCAACCCTGGAAGGCACCGCTCGCATCAACGTAACCCGGATTCAGCCGGCGCGTCTGGTCGAG
ATTCGCCCCAACACCCGCATCAACATGCTGGCCGGAGCGATCCTCGGCCTGGTCTTAGGGATCGTCCTGGCCTTCGTGCT
CGAATATCTCGACGACACCCTGAAAACGTCTGAAGATGTTGAGCGTTTTGTTGGGCTGCCCACACTCGGCGCTATTCCGC
TTAGCGAACGGTAG

Upstream 100 bases:

>100_bases
TAGTATTTGACGCTGCCTTGCGCACGGCGCTTGGTCTAATCGCCGGGTTCGCGCTGGCAGTTGCTGCTACTGTGCTCTAC
GAACGCAGGGAGAATCGATT

Downstream 100 bases:

>100_bases
TAACTCGTCAGTCCGGCCATCTTGTTGCGAGAGTGTAACCCGCGCTATGCATTGGGTTTGAAGGTAGGAGTCATGATCGT
GACCTCGTCGTCTGAGCAGG

Product: lipopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MEIRDYVNVLVKRWWVIVLTAIAAVGSAYVISKLLPQTYRSQAVYLALANQADNGLNIVLRNSMNSYRELVMQPSVLDQI
SQQIGLDISGERLMEDVNIQPRPDEQKIVIEVDLPRLDQSQALADAVGERIVAEVNRINATLEGTARINVTRIQPARLVE
IRPNTRINMLAGAILGLVLGIVLAFVLEYLDDTLKTSEDVERFVGLPTLGAIPLSER

Sequences:

>Translated_217_residues
MEIRDYVNVLVKRWWVIVLTAIAAVGSAYVISKLLPQTYRSQAVYLALANQADNGLNIVLRNSMNSYRELVMQPSVLDQI
SQQIGLDISGERLMEDVNIQPRPDEQKIVIEVDLPRLDQSQALADAVGERIVAEVNRINATLEGTARINVTRIQPARLVE
IRPNTRINMLAGAILGLVLGIVLAFVLEYLDDTLKTSEDVERFVGLPTLGAIPLSER
>Mature_217_residues
MEIRDYVNVLVKRWWVIVLTAIAAVGSAYVISKLLPQTYRSQAVYLALANQADNGLNIVLRNSMNSYRELVMQPSVLDQI
SQQIGLDISGERLMEDVNIQPRPDEQKIVIEVDLPRLDQSQALADAVGERIVAEVNRINATLEGTARINVTRIQPARLVE
IRPNTRINMLAGAILGLVLGIVLAFVLEYLDDTLKTSEDVERFVGLPTLGAIPLSER

Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]

COG id: COG3944

COG function: function code M; Capsular polysaccharide biosynthesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsC/CapA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003856 [H]

Pfam domain/function: PF02706 Wzz [H]

EC number: NA

Molecular weight: Translated: 24114; Mature: 24114

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIRDYVNVLVKRWWVIVLTAIAAVGSAYVISKLLPQTYRSQAVYLALANQADNGLNIVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEE
RNSMNSYRELVMQPSVLDQISQQIGLDISGERLMEDVNIQPRPDEQKIVIEVDLPRLDQS
ECCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCEEEEEEECCCCCHH
QALADAVGERIVAEVNRINATLEGTARINVTRIQPARLVEIRPNTRINMLAGAILGLVLG
HHHHHHHHHHHHHHHHHHCCEEECCEEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHH
IVLAFVLEYLDDTLKTSEDVERFVGLPTLGAIPLSER
HHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MEIRDYVNVLVKRWWVIVLTAIAAVGSAYVISKLLPQTYRSQAVYLALANQADNGLNIVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEE
RNSMNSYRELVMQPSVLDQISQQIGLDISGERLMEDVNIQPRPDEQKIVIEVDLPRLDQS
ECCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCEEEEEEECCCCCHH
QALADAVGERIVAEVNRINATLEGTARINVTRIQPARLVEIRPNTRINMLAGAILGLVLG
HHHHHHHHHHHHHHHHHHCCEEECCEEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHH
IVLAFVLEYLDDTLKTSEDVERFVGLPTLGAIPLSER
HHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA