| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523353
Identifier: 222523353
GI number: 222523353
Start: 57052
End: 57930
Strand: Direct
Name: 222523353
Synonym: Chy400_0054
Alternate gene names: NA
Gene position: 57052-57930 (Clockwise)
Preceding gene: 222523352
Following gene: 222523354
Centisome position: 1.08
GC content: 59.04
Gene sequence:
>879_bases ATGAACCCATTCATCCGGTTGCGCGAAGCGGTGATCGATACCGTATTGAGCATAAACGAGCAGCAGGTGCTCAATGCCGG CACCGGAACCGTACCTGCACCTACCGACGACGGCGTAGCCCTGGCAGCCGCGCTCAGGCAGGCGATGCAGCAATTCAAAG CCCAGGCCATGGATGAAGAAGGGAAGCTGGTGGCGTATCAGCGCCTGCGCAACGATCCGGCGTACCTTGCCTACCGTTCA GAACTAACCCCACAACTGCAACGGTTTGATCCGGCGTCACTTCCTGATCGCGCCACTCGTCTCGCCTTCTGGATCAACCT GTACAACGCCCTGGTGATAGATGCGGTGATCGCCTTTGGCATCACAACCAGCGTCGCCGATCAATGGTCGGGCTTACGCT TCTTTCGAGCGGCTGCCTACCAGATCGGTGGTCTACGCTGTTCACTCGACGACATCGAACACGGTATTCTACGCGCCAAT CGCGGCCACCCCTTCATTCCCGGCCCACAATTTGCCGCCAGCGATCCACGGCTAGGCTGGATCATCGATCCACCAGATCC ACGCATCCACTTTGCGCTCAACTGCGCCAGCCTCTCGTGTCCGCCGATTGGGGTATATCGCGCAGAACAGATAGACCAGC AACTCGACCTGGCGCTGCGCGCCTTCGTAGCCGCCGATGTAGCAATTGACCCGACGCGCGCCGAGATTCATCTGTCACGC ATTTTTGACTGGTACCGGGAAGATTTTGGGGGAACGGATGGGATTATTCAACTCTTACGACAGGCACTCCCCGCCGACGA ACGACGCGCCTGGCTCTTGCAGGCACGACAGGCCCGTCTCATCTACCGCCCATACGACTGGCGATTGAACCTGGCCTGA
Upstream 100 bases:
>100_bases GTGGCCGGATCGTGCTGTGTGATGGGATGGCGTTGACCTGGCCCGGCCCACGCACAGCCACTGCCATCACAACATTTCGG CGCATTCTGGAGCAGACTAC
Downstream 100 bases:
>100_bases AGGAGCGGCTATGACCGACGACTGGCGCAAGCAGTCACTCAAAGAATTGTACCGCCTGACCGGACAGATCTTCTCGCAGA TACCGGCACTGGCCCGGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MNPFIRLREAVIDTVLSINEQQVLNAGTGTVPAPTDDGVALAAALRQAMQQFKAQAMDEEGKLVAYQRLRNDPAYLAYRS ELTPQLQRFDPASLPDRATRLAFWINLYNALVIDAVIAFGITTSVADQWSGLRFFRAAAYQIGGLRCSLDDIEHGILRAN RGHPFIPGPQFAASDPRLGWIIDPPDPRIHFALNCASLSCPPIGVYRAEQIDQQLDLALRAFVAADVAIDPTRAEIHLSR IFDWYREDFGGTDGIIQLLRQALPADERRAWLLQARQARLIYRPYDWRLNLA
Sequences:
>Translated_292_residues MNPFIRLREAVIDTVLSINEQQVLNAGTGTVPAPTDDGVALAAALRQAMQQFKAQAMDEEGKLVAYQRLRNDPAYLAYRS ELTPQLQRFDPASLPDRATRLAFWINLYNALVIDAVIAFGITTSVADQWSGLRFFRAAAYQIGGLRCSLDDIEHGILRAN RGHPFIPGPQFAASDPRLGWIIDPPDPRIHFALNCASLSCPPIGVYRAEQIDQQLDLALRAFVAADVAIDPTRAEIHLSR IFDWYREDFGGTDGIIQLLRQALPADERRAWLLQARQARLIYRPYDWRLNLA >Mature_292_residues MNPFIRLREAVIDTVLSINEQQVLNAGTGTVPAPTDDGVALAAALRQAMQQFKAQAMDEEGKLVAYQRLRNDPAYLAYRS ELTPQLQRFDPASLPDRATRLAFWINLYNALVIDAVIAFGITTSVADQWSGLRFFRAAAYQIGGLRCSLDDIEHGILRAN RGHPFIPGPQFAASDPRLGWIIDPPDPRIHFALNCASLSCPPIGVYRAEQIDQQLDLALRAFVAADVAIDPTRAEIHLSR IFDWYREDFGGTDGIIQLLRQALPADERRAWLLQARQARLIYRPYDWRLNLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI133901914, Length=225, Percent_Identity=30.6666666666667, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI133901916, Length=225, Percent_Identity=30.6666666666667, Blast_Score=101, Evalue=5e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32766; Mature: 32766
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPFIRLREAVIDTVLSINEQQVLNAGTGTVPAPTDDGVALAAALRQAMQQFKAQAMDEE CCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC GKLVAYQRLRNDPAYLAYRSELTPQLQRFDPASLPDRATRLAFWINLYNALVIDAVIAFG CCEEHHHHHCCCCCEEEEHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ITTSVADQWSGLRFFRAAAYQIGGLRCSLDDIEHGILRANRGHPFIPGPQFAASDPRLGW HHHHHHHHHCCHHHHHHHHHHHCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEE IIDPPDPRIHFALNCASLSCPPIGVYRAEQIDQQLDLALRAFVAADVAIDPTRAEIHLSR EECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHH IFDWYREDFGGTDGIIQLLRQALPADERRAWLLQARQARLIYRPYDWRLNLA HHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCCEEECC >Mature Secondary Structure MNPFIRLREAVIDTVLSINEQQVLNAGTGTVPAPTDDGVALAAALRQAMQQFKAQAMDEE CCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC GKLVAYQRLRNDPAYLAYRSELTPQLQRFDPASLPDRATRLAFWINLYNALVIDAVIAFG CCEEHHHHHCCCCCEEEEHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ITTSVADQWSGLRFFRAAAYQIGGLRCSLDDIEHGILRANRGHPFIPGPQFAASDPRLGW HHHHHHHHHCCHHHHHHHHHHHCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEE IIDPPDPRIHFALNCASLSCPPIGVYRAEQIDQQLDLALRAFVAADVAIDPTRAEIHLSR EECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHH IFDWYREDFGGTDGIIQLLRQALPADERRAWLLQARQARLIYRPYDWRLNLA HHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA