Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
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Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is 220932363
Identifier: 220932363
GI number: 220932363
Start: 1633696
End: 1634031
Strand: Direct
Name: 220932363
Synonym: Hore_15270
Alternate gene names: NA
Gene position: 1633696-1634031 (Clockwise)
Preceding gene: 220932335
Following gene: 220932388
Centisome position: 63.37
GC content: 39.58
Gene sequence:
>336_bases ATGTCAATTATTAAGAAAGCCGAAGAGTTGGGAAAAGAAATAGTAGATTCAGCAGAATATAAAGAACTGAAATCTACTGA AGAAGCAATGCAAAATGATAAGGAAGCCCAGTCCTTACTTAATGAATTTAGATCAAAACAGCAAAGGTTACAGATGGCCC AGGCCAATGGAAAGAATATAACCGAGGACCAGAAGAAAGAACTTATGGCCCTTCAGGCCAGAATGCAGGAAAATGAAAAG ATTAAAAACTTCATGACTGCCCAGCAGAAGTTTAACCAGGTAATGCAAACCGTTAACCAGGCCATTACAGGTATAATCGC CGGTCAGCATGCCTAA
Upstream 100 bases:
>100_bases AATCCTGGTCAAATCCCCAGATTTGACACAGCTATTAATAAATGTTAACATTATGAAGACACATTAAGTGTTAAACAAAC ATAACGAGGTGAATTTTTTT
Downstream 100 bases:
>100_bases TAGTTATTTATAAACAAAAAAAATAGCCCTGTCCAGCCTTTACTGGCTGTTCAGGGCTTTTTTATAATTTACTGAATAAA AATGCGGGACGTGTCTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MSIIKKAEELGKEIVDSAEYKELKSTEEAMQNDKEAQSLLNEFRSKQQRLQMAQANGKNITEDQKKELMALQARMQENEK IKNFMTAQQKFNQVMQTVNQAITGIIAGQHA
Sequences:
>Translated_111_residues MSIIKKAEELGKEIVDSAEYKELKSTEEAMQNDKEAQSLLNEFRSKQQRLQMAQANGKNITEDQKKELMALQARMQENEK IKNFMTAQQKFNQVMQTVNQAITGIIAGQHA >Mature_110_residues SIIKKAEELGKEIVDSAEYKELKSTEEAMQNDKEAQSLLNEFRSKQQRLQMAQANGKNITEDQKKELMALQARMQENEKI KNFMTAQQKFNQVMQTVNQAITGIIAGQHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0342 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010368 [H]
Pfam domain/function: PF06133 DUF964 [H]
EC number: NA
Molecular weight: Translated: 12689; Mature: 12557
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIIKKAEELGKEIVDSAEYKELKSTEEAMQNDKEAQSLLNEFRSKQQRLQMAQANGKNI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC TEDQKKELMALQARMQENEKIKNFMTAQQKFNQVMQTVNQAITGIIAGQHA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SIIKKAEELGKEIVDSAEYKELKSTEEAMQNDKEAQSLLNEFRSKQQRLQMAQANGKNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC TEDQKKELMALQARMQENEKIKNFMTAQQKFNQVMQTVNQAITGIIAGQHA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA