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The map label for this gene is ybfF [C]

Identifier: 220932335

GI number: 220932335

Start: 1598885

End: 1599604

Strand: Direct

Name: ybfF [C]

Synonym: Hore_14980

Alternate gene names: 220932335

Gene position: 1598885-1599604 (Clockwise)

Preceding gene: 220932334

Following gene: 220932363

Centisome position: 62.02

GC content: 38.33

Gene sequence:

>720_bases
ATGAAAACATTAATAATAATTCCGACATATAATGAAAGGGAGAACATTAAAGACCTCTTAAGAGAAGTCTTTAATATTAA
TGAAGATATAGATATTCTGGTGGTAGATGATAACTCACCTGATGGCACCGCTGAATTAGTAAAGGAACTTAAAGAACAGA
AATATAAAACAAGACTTCATTTACTGGTAAGGGAGGGCAAGCTGGGACTGGCCTCGGCCTATATAACCGGGTTTAAGTGG
GCATTGAAACATAATTATCAATACATCTTTGAAATGGATGCCGATTTTTCACATAACCCTGTTTATATACCTGACTTTTT
AGAGAAACTAAAAAACTATGATCTGGTCCTTGGAAGCCGCTATGTTGAAGGTGGAGGAGTAAAAGACTGGGGACTTATAA
GAAAAATTATGAGCCGGGGTGGCAGTCTCTATGCCCGGTTAATCTTAAACCTCCCCTACCATGACCTGACCGGAGGATTT
AAGGGATTCAGGCGTGAGGTCCTGGAAGCTATAGACCTTGATTCAGTTAAATCAGAGGGGTATTCTTTTCAAATTGAAAT
GACCTATCGGGCTCATCTCAAAGGTTTTAATATTAAGGAAACACCTATTATCTTCGAAGATAGAACCCTGGGCAAATCCA
AAATGTCCAAAAAAATATTTATGGAAGCTGTATTTATGGTCTGGTGGCTCAGATTCCATAAAAGGCAATTAATGGCCTAG

Upstream 100 bases:

>100_bases
AAGTACCTATATATACCCATTCTTCTGTCATAAGTTGACACAATATTTAACAAAATGATAGAATTTTTAAGGAGATAGAC
CAGATAAAAAGGAGGAAGCC

Downstream 100 bases:

>100_bases
AAACGGACTCTTGGATAGATATTATTCCATATTCTACACTTTTATTATACAACTCTTTTTGTAATATTACAAATACTGAA
AATATAAAATGCCGGGGAAT

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MKTLIIIPTYNERENIKDLLREVFNINEDIDILVVDDNSPDGTAELVKELKEQKYKTRLHLLVREGKLGLASAYITGFKW
ALKHNYQYIFEMDADFSHNPVYIPDFLEKLKNYDLVLGSRYVEGGGVKDWGLIRKIMSRGGSLYARLILNLPYHDLTGGF
KGFRREVLEAIDLDSVKSEGYSFQIEMTYRAHLKGFNIKETPIIFEDRTLGKSKMSKKIFMEAVFMVWWLRFHKRQLMA

Sequences:

>Translated_239_residues
MKTLIIIPTYNERENIKDLLREVFNINEDIDILVVDDNSPDGTAELVKELKEQKYKTRLHLLVREGKLGLASAYITGFKW
ALKHNYQYIFEMDADFSHNPVYIPDFLEKLKNYDLVLGSRYVEGGGVKDWGLIRKIMSRGGSLYARLILNLPYHDLTGGF
KGFRREVLEAIDLDSVKSEGYSFQIEMTYRAHLKGFNIKETPIIFEDRTLGKSKMSKKIFMEAVFMVWWLRFHKRQLMA
>Mature_239_residues
MKTLIIIPTYNERENIKDLLREVFNINEDIDILVVDDNSPDGTAELVKELKEQKYKTRLHLLVREGKLGLASAYITGFKW
ALKHNYQYIFEMDADFSHNPVYIPDFLEKLKNYDLVLGSRYVEGGGVKDWGLIRKIMSRGGSLYARLILNLPYHDLTGGF
KGFRREVLEAIDLDSVKSEGYSFQIEMTYRAHLKGFNIKETPIIFEDRTLGKSKMSKKIFMEAVFMVWWLRFHKRQLMA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503363, Length=217, Percent_Identity=42.8571428571429, Blast_Score=166, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI71999402, Length=218, Percent_Identity=40.3669724770642, Blast_Score=162, Evalue=2e-40,
Organism=Saccharomyces cerevisiae, GI6325441, Length=227, Percent_Identity=33.4801762114537, Blast_Score=124, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24585265, Length=218, Percent_Identity=39.4495412844037, Blast_Score=156, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 27956; Mature: 27956

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLIIIPTYNERENIKDLLREVFNINEDIDILVVDDNSPDGTAELVKELKEQKYKTRLH
CCEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
LLVREGKLGLASAYITGFKWALKHNYQYIFEMDADFSHNPVYIPDFLEKLKNYDLVLGSR
HHEECCCCCHHHHHHHHHHHEECCCEEEEEEECCCCCCCCEEHHHHHHHHCCCCEEEECE
YVEGGGVKDWGLIRKIMSRGGSLYARLILNLPYHDLTGGFKGFRREVLEAIDLDSVKSEG
EECCCCCCHHHHHHHHHHCCCCEEEHHHHCCCCHHHCCHHHHHHHHHHHHHCCHHHHCCC
YSFQIEMTYRAHLKGFNIKETPIIFEDRTLGKSKMSKKIFMEAVFMVWWLRFHKRQLMA
EEEEEEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTLIIIPTYNERENIKDLLREVFNINEDIDILVVDDNSPDGTAELVKELKEQKYKTRLH
CCEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
LLVREGKLGLASAYITGFKWALKHNYQYIFEMDADFSHNPVYIPDFLEKLKNYDLVLGSR
HHEECCCCCHHHHHHHHHHHEECCCEEEEEEECCCCCCCCEEHHHHHHHHCCCCEEEECE
YVEGGGVKDWGLIRKIMSRGGSLYARLILNLPYHDLTGGFKGFRREVLEAIDLDSVKSEG
EECCCCCCHHHHHHHHHHCCCCEEEHHHHCCCCHHHCCHHHHHHHHHHHHHCCHHHHCCC
YSFQIEMTYRAHLKGFNIKETPIIFEDRTLGKSKMSKKIFMEAVFMVWWLRFHKRQLMA
EEEEEEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]