Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
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Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is 220931294
Identifier: 220931294
GI number: 220931294
Start: 484569
End: 484784
Strand: Reverse
Name: 220931294
Synonym: Hore_04490
Alternate gene names: NA
Gene position: 484784-484569 (Counterclockwise)
Preceding gene: 220931322
Following gene: 220931293
Centisome position: 18.8
GC content: 33.8
Gene sequence:
>216_bases ATGGGAAGAAAAAAATATTCAGAAGAGTTCAAAAGAGAAGCTGTAGAACTTAGTTTTAGCTCAGATAAATCTTGTAAAGT TATAGCAAAAGAACTAGGTATCATTTATCATAATTTAATCAGACGGCGCAGGGAATACAAAAACAAAGGTGACTTAGCTT TCCCAGGCAATGGCAAAAAAAGTTATCCCCTGAACAGAAAGAAATTCAAAGGCTAA
Upstream 100 bases:
>100_bases CAAATAATTTAGATATAAAAAATTAAAAAATTGTTATATGACCTTCCCTCCATTTGTCGGACACAGGGTTTAGGTATAAT TAACCCAGGAGGTGCCCATA
Downstream 100 bases:
>100_bases AAAAAGAATTAAGTGATATAAAAATAGAGCGTGATATATTAAAAAAAGCAGTGCGCATCTTCTTAAAGGAACCGAAATGA TATATGGTTTCATCCGAGAA
Product: transposase IS3/IS911
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MGRKKYSEEFKREAVELSFSSDKSCKVIAKELGIIYHNLIRRRREYKNKGDLAFPGNGKKSYPLNRKKFKG
Sequences:
>Translated_71_residues MGRKKYSEEFKREAVELSFSSDKSCKVIAKELGIIYHNLIRRRREYKNKGDLAFPGNGKKSYPLNRKKFKG >Mature_70_residues GRKKYSEEFKREAVELSFSSDKSCKVIAKELGIIYHNLIRRRREYKNKGDLAFPGNGKKSYPLNRKKFKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8341; Mature: 8210
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRKKYSEEFKREAVELSFSSDKSCKVIAKELGIIYHNLIRRRREYKNKGDLAFPGNGKK CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC SYPLNRKKFKG CCCCCCCCCCC >Mature Secondary Structure GRKKYSEEFKREAVELSFSSDKSCKVIAKELGIIYHNLIRRRREYKNKGDLAFPGNGKK CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC SYPLNRKKFKG CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA