Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
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Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is 220931322
Identifier: 220931322
GI number: 220931322
Start: 509880
End: 511154
Strand: Reverse
Name: 220931322
Synonym: Hore_04770
Alternate gene names: NA
Gene position: 511154-509880 (Counterclockwise)
Preceding gene: 220931323
Following gene: 220931294
Centisome position: 19.83
GC content: 43.61
Gene sequence:
>1275_bases ATGTCACTTTTAATTTTTTTACTCTGCATATCCCTGGTATTCACCCACCAGGCTACAGCCCAGGAGACCATCTCAGGAAC CTGGAAGGGAGCTATTAATGTCAAGGGGCAGACACTGGACATTACCATTCATATTAAACCTGATAATAATGGTGGTTACC TGGCTACCATTGATATTCCCGCCCAGGGGGTTAAAAACTATGCCCTGAAGAATGTAAAATATAATCACCCTGACCTCTAT ATGGAGCTACCAGCTAATATAACCGGTTTCTTCAATGGTAAAGTCAGTGGAGCCAGAATTAAAGGAAAATATACCCAGGG TTCAGCCCGGGGAACCTTTTATCTAAATAAAAAGACAACCGATGAATCCGAAACCAGATCAAAAGATAATGATACCGGGA CTGAACCCATTAGCCTGAAAACAGAGACCGGTACCATATATGGTACCCTCCAGTTACCCCATTCTAACAAAAAATCCCCG GTAATACTTATAATTGCCGGTTCTGGAATAACAGACCGGAATGGTAATTCACCTGGTGCTACCAATAACTGCCTTAAGAT GCTAAGCCAGGACCTGGCCAGGGCCGGTTTTGCTTCTGTCAGGTATGATAAAAGGGGAACCGGTCAGAGCAAAGGAGCCA TTAATAGCCCTTCTGACATCAGGTTTGAACACTTTATAAATGACGCGACTGGCTGGGTTAAAAAATTGAAGAAAGATAAA AGATTTACCGGAGTAACTGTCTTAGGACTCAGCCAGGGGTCCCTGGTGGGAATGATCGCCGCCCGCCGCGCCGAGGCCGA TGCCTTTATATCTCTGGCCGGAGCCGGTCGTTCCATTGATAAGGTCTTAAAATATCAACTAATAAGCCTTAATGATGATC TATACCAGGAAGCCCTGGATATTCTGGATAAACTGAAACAGGGGCAGACGGTAAGCCAGGTCAACCAGAAACTCTATTCT ATCTTTCATCCCTTAAACCAGCCTTTTCTTATCTCCTATATCAAATATGACCCGGCTGAAGAGATAGCTAAACTTGATAT CCCGGTCCTTTTGATTCACGGAACAAATGATATCCAGGTCAAAAAGGAAGAAGCTAATATTCTTAAAAAAGCCTATCCAG AAGCAAAATTGGTCCTCATCGAGGGAATGAACCATGTCCTGAAAAAAGCACCGGAAGACCCCAGGCAAAACTACATGACC TACAACAACCCTGATCTACCTCTGGCTGATAACCTGGTCGAGAGTATTGTTAAGTTTCTTGAAAAGGTATATTAA
Upstream 100 bases:
>100_bases CATATACAGTACTGATCTTTACCTGCTTTTAAAGGTTAAATAATTCTTTACCCTATATTTAAGGAGGCGTTAAGTTATGT TAAAAAAGATTATTAAAAGG
Downstream 100 bases:
>100_bases CCTGGCTAAAAAACAAATTGACTTCGGCGTCTTATTTTTAAATGTAAATTTCTTGATACCGAAAAATTATATTCACAAAA TAACTTATGTATAATACCCT
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Fold Family Hydrolase; Lipoprotein; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase; Protein Containing Alpha/Beta Hydrolase Fold; Hydrolase; Peptidase S; Secreted Protein; Signal Peptide; Hydrolase Alpha/Beta Fold Family; Lysophospholipase-Like Protein
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MSLLIFLLCISLVFTHQATAQETISGTWKGAINVKGQTLDITIHIKPDNNGGYLATIDIPAQGVKNYALKNVKYNHPDLY MELPANITGFFNGKVSGARIKGKYTQGSARGTFYLNKKTTDESETRSKDNDTGTEPISLKTETGTIYGTLQLPHSNKKSP VILIIAGSGITDRNGNSPGATNNCLKMLSQDLARAGFASVRYDKRGTGQSKGAINSPSDIRFEHFINDATGWVKKLKKDK RFTGVTVLGLSQGSLVGMIAARRAEADAFISLAGAGRSIDKVLKYQLISLNDDLYQEALDILDKLKQGQTVSQVNQKLYS IFHPLNQPFLISYIKYDPAEEIAKLDIPVLLIHGTNDIQVKKEEANILKKAYPEAKLVLIEGMNHVLKKAPEDPRQNYMT YNNPDLPLADNLVESIVKFLEKVY
Sequences:
>Translated_424_residues MSLLIFLLCISLVFTHQATAQETISGTWKGAINVKGQTLDITIHIKPDNNGGYLATIDIPAQGVKNYALKNVKYNHPDLY MELPANITGFFNGKVSGARIKGKYTQGSARGTFYLNKKTTDESETRSKDNDTGTEPISLKTETGTIYGTLQLPHSNKKSP VILIIAGSGITDRNGNSPGATNNCLKMLSQDLARAGFASVRYDKRGTGQSKGAINSPSDIRFEHFINDATGWVKKLKKDK RFTGVTVLGLSQGSLVGMIAARRAEADAFISLAGAGRSIDKVLKYQLISLNDDLYQEALDILDKLKQGQTVSQVNQKLYS IFHPLNQPFLISYIKYDPAEEIAKLDIPVLLIHGTNDIQVKKEEANILKKAYPEAKLVLIEGMNHVLKKAPEDPRQNYMT YNNPDLPLADNLVESIVKFLEKVY >Mature_423_residues SLLIFLLCISLVFTHQATAQETISGTWKGAINVKGQTLDITIHIKPDNNGGYLATIDIPAQGVKNYALKNVKYNHPDLYM ELPANITGFFNGKVSGARIKGKYTQGSARGTFYLNKKTTDESETRSKDNDTGTEPISLKTETGTIYGTLQLPHSNKKSPV ILIIAGSGITDRNGNSPGATNNCLKMLSQDLARAGFASVRYDKRGTGQSKGAINSPSDIRFEHFINDATGWVKKLKKDKR FTGVTVLGLSQGSLVGMIAARRAEADAFISLAGAGRSIDKVLKYQLISLNDDLYQEALDILDKLKQGQTVSQVNQKLYSI FHPLNQPFLISYIKYDPAEEIAKLDIPVLLIHGTNDIQVKKEEANILKKAYPEAKLVLIEGMNHVLKKAPEDPRQNYMTY NNPDLPLADNLVESIVKFLEKVY
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46737; Mature: 46606
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLIFLLCISLVFTHQATAQETISGTWKGAINVKGQTLDITIHIKPDNNGGYLATIDIP CHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCEEEEEEEEEEECCCCCEEEEEECC AQGVKNYALKNVKYNHPDLYMELPANITGFFNGKVSGARIKGKYTQGSARGTFYLNKKTT CHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCCCCCEEEEEEECCCCCCEEEEECCCCC DESETRSKDNDTGTEPISLKTETGTIYGTLQLPHSNKKSPVILIIAGSGITDRNGNSPGA CCHHHCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCC TNNCLKMLSQDLARAGFASVRYDKRGTGQSKGAINSPSDIRFEHFINDATGWVKKLKKDK HHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC RFTGVTVLGLSQGSLVGMIAARRAEADAFISLAGAGRSIDKVLKYQLISLNDDLYQEALD CCCCEEEEEECCCCEEEHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHH ILDKLKQGQTVSQVNQKLYSIFHPLNQPFLISYIKYDPAEEIAKLDIPVLLIHGTNDIQV HHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHCCCCEEEEECCCCEEE KKEEANILKKAYPEAKLVLIEGMNHVLKKAPEDPRQNYMTYNNPDLPLADNLVESIVKFL EHHHHHHHHHHCCCEEEEEEHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHH EKVY HHCC >Mature Secondary Structure SLLIFLLCISLVFTHQATAQETISGTWKGAINVKGQTLDITIHIKPDNNGGYLATIDIP HHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCEEEEEEEEEEECCCCCEEEEEECC AQGVKNYALKNVKYNHPDLYMELPANITGFFNGKVSGARIKGKYTQGSARGTFYLNKKTT CHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCCCCCEEEEEEECCCCCCEEEEECCCCC DESETRSKDNDTGTEPISLKTETGTIYGTLQLPHSNKKSPVILIIAGSGITDRNGNSPGA CCHHHCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCC TNNCLKMLSQDLARAGFASVRYDKRGTGQSKGAINSPSDIRFEHFINDATGWVKKLKKDK HHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC RFTGVTVLGLSQGSLVGMIAARRAEADAFISLAGAGRSIDKVLKYQLISLNDDLYQEALD CCCCEEEEEECCCCEEEHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHH ILDKLKQGQTVSQVNQKLYSIFHPLNQPFLISYIKYDPAEEIAKLDIPVLLIHGTNDIQV HHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHCCCCEEEEECCCCEEE KKEEANILKKAYPEAKLVLIEGMNHVLKKAPEDPRQNYMTYNNPDLPLADNLVESIVKFL EHHHHHHHHHHCCCEEEEEEHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHH EKVY HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA