Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
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Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is 220931125
Identifier: 220931125
GI number: 220931125
Start: 279253
End: 280158
Strand: Direct
Name: 220931125
Synonym: Hore_02770
Alternate gene names: NA
Gene position: 279253-280158 (Clockwise)
Preceding gene: 220931124
Following gene: 220931126
Centisome position: 10.83
GC content: 33.66
Gene sequence:
>906_bases ATGACTAAAAAGGCTGGATTATTTGTTGGTTTGACATTATCTTTTAGTTGGTTGATAGCTTTTTTATTTTTTCATTTTGT TGGTACAGGTAATATTTTATTTTATACTTTGATGTCAATCGGGTATATGTTTATTCCCTTACTGGTAACAATTATAATAC AGAAAATTATTTATAATGAACCTGTTAAAAAACCGATGGGTATTTCTTTTAAGTTTAATAAATGGTTTGTGATAGCCTGG TTATTGCCACTAATAATGGCTTTTATGACTTTTGGGGTCAGTTTATTATTTCCCCAGGTTGAGTACAGTCCTGATATGGC AGGTATGTTTGCCAGGTATCTGGATCAGTTTGGACCAGAAAAGATAGAACAGATGAAACAGGCAATGAAAGTTGCCCCCA TTCATCCATTCTGGATGTCAGTAATTCAGGCTTTACTGGCAGGATTTACTATAAATGCTTTAGTAGCTTTTGGAGAAGAA TTAGGCTGGAGGGGTTTTTTACAGCAGGAATTTAATAAACTCGGATTCTGGCCATCATCCCTATTAATCGGTTTTATCTG GGGGTTATGGCATGCTCCCTTAATATTACAGGGCCATAATTATCCCCAGCATCCTAAATTCGGGGTTTTGATGATGATTA TCTGGTGTATTTTATTATCACCTTTATTTAGTTATATAAGAATCAAGTCAGGTTCAGTTATTGCCGCTGCTATTTTTCAT GGTACTATCAATGCCAGCTTTGGTCTGGCAATTGTATTAATCAAAGGAGGTAGTGATTTAATAGTAGGATTTACCGGATT AGCTGGCTTTATTGTACTGTTGTTACTAAATGTTCTTTTATTTCTTTATGATATCAGGTATGCTAAAGAGTCTATTATTA ATAATTCTTTATATATAAAGATATGA
Upstream 100 bases:
>100_bases ATCTTTCTGGGAAGTCTTATCTTAACAGGGGTTTTATGTTTAGCATATTCTTTCATTGTATATAAAAAAATGGAGAGGAA ATTGGAGGAAGGGGACCAAG
Downstream 100 bases:
>100_bases GACCTGTTCAATATTATCTTTTGTTGGTCCAACCTTTAATAGACTTTAACCCCCCTGCCATATATGATATACTTTAAATA AGGAATAAAATGTAAACAAT
Product: abortive infection protein
Products: NA
Alternate protein names: CAAX Amino Terminal Protease Family Protein; CAAX Amino Terminal Protease Family; Membrane Spanning Protein; Caax Amino Terminal Protease Family; Phosphoenolpyruvate Synthase
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MTKKAGLFVGLTLSFSWLIAFLFFHFVGTGNILFYTLMSIGYMFIPLLVTIIIQKIIYNEPVKKPMGISFKFNKWFVIAW LLPLIMAFMTFGVSLLFPQVEYSPDMAGMFARYLDQFGPEKIEQMKQAMKVAPIHPFWMSVIQALLAGFTINALVAFGEE LGWRGFLQQEFNKLGFWPSSLLIGFIWGLWHAPLILQGHNYPQHPKFGVLMMIIWCILLSPLFSYIRIKSGSVIAAAIFH GTINASFGLAIVLIKGGSDLIVGFTGLAGFIVLLLLNVLLFLYDIRYAKESIINNSLYIKI
Sequences:
>Translated_301_residues MTKKAGLFVGLTLSFSWLIAFLFFHFVGTGNILFYTLMSIGYMFIPLLVTIIIQKIIYNEPVKKPMGISFKFNKWFVIAW LLPLIMAFMTFGVSLLFPQVEYSPDMAGMFARYLDQFGPEKIEQMKQAMKVAPIHPFWMSVIQALLAGFTINALVAFGEE LGWRGFLQQEFNKLGFWPSSLLIGFIWGLWHAPLILQGHNYPQHPKFGVLMMIIWCILLSPLFSYIRIKSGSVIAAAIFH GTINASFGLAIVLIKGGSDLIVGFTGLAGFIVLLLLNVLLFLYDIRYAKESIINNSLYIKI >Mature_300_residues TKKAGLFVGLTLSFSWLIAFLFFHFVGTGNILFYTLMSIGYMFIPLLVTIIIQKIIYNEPVKKPMGISFKFNKWFVIAWL LPLIMAFMTFGVSLLFPQVEYSPDMAGMFARYLDQFGPEKIEQMKQAMKVAPIHPFWMSVIQALLAGFTINALVAFGEEL GWRGFLQQEFNKLGFWPSSLLIGFIWGLWHAPLILQGHNYPQHPKFGVLMMIIWCILLSPLFSYIRIKSGSVIAAAIFHG TINASFGLAIVLIKGGSDLIVGFTGLAGFIVLLLLNVLLFLYDIRYAKESIINNSLYIKI
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34032; Mature: 33900
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKAGLFVGLTLSFSWLIAFLFFHFVGTGNILFYTLMSIGYMFIPLLVTIIIQKIIYNE CCCCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PVKKPMGISFKFNKWFVIAWLLPLIMAFMTFGVSLLFPQVEYSPDMAGMFARYLDQFGPE CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHH KIEQMKQAMKVAPIHPFWMSVIQALLAGFTINALVAFGEELGWRGFLQQEFNKLGFWPSS HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHH LLIGFIWGLWHAPLILQGHNYPQHPKFGVLMMIIWCILLSPLFSYIRIKSGSVIAAAIFH HHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHH GTINASFGLAIVLIKGGSDLIVGFTGLAGFIVLLLLNVLLFLYDIRYAKESIINNSLYIK HHCCCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE I C >Mature Secondary Structure TKKAGLFVGLTLSFSWLIAFLFFHFVGTGNILFYTLMSIGYMFIPLLVTIIIQKIIYNE CCCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PVKKPMGISFKFNKWFVIAWLLPLIMAFMTFGVSLLFPQVEYSPDMAGMFARYLDQFGPE CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHH KIEQMKQAMKVAPIHPFWMSVIQALLAGFTINALVAFGEELGWRGFLQQEFNKLGFWPSS HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHH LLIGFIWGLWHAPLILQGHNYPQHPKFGVLMMIIWCILLSPLFSYIRIKSGSVIAAAIFH HHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHH GTINASFGLAIVLIKGGSDLIVGFTGLAGFIVLLLLNVLLFLYDIRYAKESIINNSLYIK HHCCCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE I C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA