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The map label for this gene is sdpI [H]

Identifier: 220931124

GI number: 220931124

Start: 278592

End: 279260

Strand: Direct

Name: sdpI [H]

Synonym: Hore_02760

Alternate gene names: 220931124

Gene position: 278592-279260 (Clockwise)

Preceding gene: 220931123

Following gene: 220931125

Centisome position: 10.81

GC content: 31.09

Gene sequence:

>669_bases
ATGAAAAAATATAATATAAAACGGGATATCTTTGCAATATTTATACTGCTGGTTGGAGTGGGATTTGCACTGGCAAGTTA
CCCTAAAATACCTGATAAAGTTCCTATTCAGTGGGGTTTAGATGGTAATGTTAATTCTTATGCTAATAAATTTCCAGGGG
CATTCTGGGGTGTGTTTGCAGCATTAGGTATATACATCTTTTTTTATCTTCAGCTGATTATAGACCCTTTAAAGAAAAAT
TACGAACGATTTAAAGATAAATACTGGATTATCAGAGATATAACAGTAGCTATATTTGTATCATTGAATTTTATGAGTAT
CTTCTGGTCTTTAGGTTATATGAAAAATAACAATATAATCATTTTGTTAATTTCAATATTAATAATTGCTATAGGAAATT
ATATGCCTACTTTTAAGAAAAACTGGTTTCTAGGAATAAAAACCCCCTGGACCTTATCCAGTGAAGAGGTATGGAATAAG
ACACACCGACTGGGAGGAAAATTATTTGTCCTTTCAGGATTAATTGGGTTAATAGAAATATTATTCTTTGATAGTAGTAA
AATCTTTCTGGGAAGTCTTATCTTAACAGGGGTTTTATGTTTAGCATATTCTTTCATTGTATATAAAAAAATGGAGAGGA
AATTGGAGGAAGGGGACCAAGATGACTAA

Upstream 100 bases:

>100_bases
AGAAGAGAAGGACAGCAGATTTATTATTCTTTAAAGATGACTGTATTTCAGGAAGTGGTTAATGAATTCATGAATTTATT
TAGAAAGGAGAGTGGTGATA

Downstream 100 bases:

>100_bases
AAAGGCTGGATTATTTGTTGGTTTGACATTATCTTTTAGTTGGTTGATAGCTTTTTTATTTTTTCATTTTGTTGGTACAG
GTAATATTTTATTTTATACT

Product: putative integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MKKYNIKRDIFAIFILLVGVGFALASYPKIPDKVPIQWGLDGNVNSYANKFPGAFWGVFAALGIYIFFYLQLIIDPLKKN
YERFKDKYWIIRDITVAIFVSLNFMSIFWSLGYMKNNNIIILLISILIIAIGNYMPTFKKNWFLGIKTPWTLSSEEVWNK
THRLGGKLFVLSGLIGLIEILFFDSSKIFLGSLILTGVLCLAYSFIVYKKMERKLEEGDQDD

Sequences:

>Translated_222_residues
MKKYNIKRDIFAIFILLVGVGFALASYPKIPDKVPIQWGLDGNVNSYANKFPGAFWGVFAALGIYIFFYLQLIIDPLKKN
YERFKDKYWIIRDITVAIFVSLNFMSIFWSLGYMKNNNIIILLISILIIAIGNYMPTFKKNWFLGIKTPWTLSSEEVWNK
THRLGGKLFVLSGLIGLIEILFFDSSKIFLGSLILTGVLCLAYSFIVYKKMERKLEEGDQDD
>Mature_222_residues
MKKYNIKRDIFAIFILLVGVGFALASYPKIPDKVPIQWGLDGNVNSYANKFPGAFWGVFAALGIYIFFYLQLIIDPLKKN
YERFKDKYWIIRDITVAIFVSLNFMSIFWSLGYMKNNNIIILLISILIIAIGNYMPTFKKNWFLGIKTPWTLSSEEVWNK
THRLGGKLFVLSGLIGLIEILFFDSSKIFLGSLILTGVLCLAYSFIVYKKMERKLEEGDQDD

Specific function: Immunity protein that provides protection for the cell against the toxic effects of its own sdpC killing factor, and that functions as a receptor/signal transduction protein as well. Once sdpC accumulates in the extracellular milieu, sdpI binds to sdpC, c

COG id: COG5658

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012867 [H]

Pfam domain/function: PF07853 DUF1648 [H]

EC number: NA

Molecular weight: Translated: 25602; Mature: 25602

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYNIKRDIFAIFILLVGVGFALASYPKIPDKVPIQWGLDGNVNSYANKFPGAFWGVFA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHCCHHHHHHHH
ALGIYIFFYLQLIIDPLKKNYERFKDKYWIIRDITVAIFVSLNFMSIFWSLGYMKNNNII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCH
ILLISILIIAIGNYMPTFKKNWFLGIKTPWTLSSEEVWNKTHRLGGKLFVLSGLIGLIEI
HHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
LFFDSSKIFLGSLILTGVLCLAYSFIVYKKMERKLEEGDQDD
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKKYNIKRDIFAIFILLVGVGFALASYPKIPDKVPIQWGLDGNVNSYANKFPGAFWGVFA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHCCHHHHHHHH
ALGIYIFFYLQLIIDPLKKNYERFKDKYWIIRDITVAIFVSLNFMSIFWSLGYMKNNNII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCH
ILLISILIIAIGNYMPTFKKNWFLGIKTPWTLSSEEVWNKTHRLGGKLFVLSGLIGLIEI
HHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
LFFDSSKIFLGSLILTGVLCLAYSFIVYKKMERKLEEGDQDD
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]