Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
---|---|
Accession | NC_011899 |
Length | 2,578,146 |
Click here to switch to the map view.
The map label for this gene is 220931126
Identifier: 220931126
GI number: 220931126
Start: 280327
End: 280875
Strand: Direct
Name: 220931126
Synonym: Hore_02780
Alternate gene names: NA
Gene position: 280327-280875 (Clockwise)
Preceding gene: 220931125
Following gene: 220931127
Centisome position: 10.87
GC content: 37.52
Gene sequence:
>549_bases ATGGTAAAAGAGCGTAATGCTTTATTTAAATGGGAAGTGGCAGGGATTTTCTGGATTATAGTTGTAGGCTCTTTATTACA CTTTGTATATGACTGGACTGACCATTCGATACTGGCAGGATTGTTTGCCCCTGTTAATGAAAGTGTCTGGGAACATTTGA AAATGGGATACTGGTCACTATTTTTCTTTGGAGTAATAGAATATATTTACTTTAAGAAGAAAAATTTTAGTTTAAATGGT TTTTTTCTGGGGAAGGCCCTGGGGGTTGCCGCTCTGGAAGGAACGATTCTGGTGGTCTTTTATACCTATACAGCCATTCT TAAAAGTGAAATATTGTGGCTAGATATTGCATCTTATATCATCGGGGCAATTATCTGTCAGATAGTTAGCTATAAGATAA TTAACAGAGAAGTTTCAAAAAAGGCCGATGTTATTGGCTTTAGTGCCTTCATCTTATTCGGGATTATTTTGATGATATTT ACGTTTTACCCACCCCGTCTACCGATATTCAGGGATGGATTAACAGGTAGATATGGTCCGACCCCATGA
Upstream 100 bases:
>100_bases ATACTTTAAATAAGGAATAAAATGTAAACAATAACAATATCTTTTAATGGATCGGGTTATTTTTTACTTTCCCGGTATTA AAAGAACAGGAGAGATATTA
Downstream 100 bases:
>100_bases GTTTTTATTTTAGCCCTCCAGATATGGAGGGCTTTTTTATGTATGTATGGGATTAAAAGTAATTCAATGGTAAAGGCCTG AAACAGGATAAAAACATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MVKERNALFKWEVAGIFWIIVVGSLLHFVYDWTDHSILAGLFAPVNESVWEHLKMGYWSLFFFGVIEYIYFKKKNFSLNG FFLGKALGVAALEGTILVVFYTYTAILKSEILWLDIASYIIGAIICQIVSYKIINREVSKKADVIGFSAFILFGIILMIF TFYPPRLPIFRDGLTGRYGPTP
Sequences:
>Translated_182_residues MVKERNALFKWEVAGIFWIIVVGSLLHFVYDWTDHSILAGLFAPVNESVWEHLKMGYWSLFFFGVIEYIYFKKKNFSLNG FFLGKALGVAALEGTILVVFYTYTAILKSEILWLDIASYIIGAIICQIVSYKIINREVSKKADVIGFSAFILFGIILMIF TFYPPRLPIFRDGLTGRYGPTP >Mature_182_residues MVKERNALFKWEVAGIFWIIVVGSLLHFVYDWTDHSILAGLFAPVNESVWEHLKMGYWSLFFFGVIEYIYFKKKNFSLNG FFLGKALGVAALEGTILVVFYTYTAILKSEILWLDIASYIIGAIICQIVSYKIINREVSKKADVIGFSAFILFGIILMIF TFYPPRLPIFRDGLTGRYGPTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20833; Mature: 20833
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKERNALFKWEVAGIFWIIVVGSLLHFVYDWTDHSILAGLFAPVNESVWEHLKMGYWSL CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHH FFFGVIEYIYFKKKNFSLNGFFLGKALGVAALEGTILVVFYTYTAILKSEILWLDIASYI HHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH IGAIICQIVSYKIINREVSKKADVIGFSAFILFGIILMIFTFYPPRLPIFRDGLTGRYGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCC TP CC >Mature Secondary Structure MVKERNALFKWEVAGIFWIIVVGSLLHFVYDWTDHSILAGLFAPVNESVWEHLKMGYWSL CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHH FFFGVIEYIYFKKKNFSLNGFFLGKALGVAALEGTILVVFYTYTAILKSEILWLDIASYI HHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH IGAIICQIVSYKIINREVSKKADVIGFSAFILFGIILMIFTFYPPRLPIFRDGLTGRYGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCC TP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA