Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220918125
Identifier: 220918125
GI number: 220918125
Start: 3352568
End: 3352996
Strand: Reverse
Name: 220918125
Synonym: A2cp1_3028
Alternate gene names: NA
Gene position: 3352996-3352568 (Counterclockwise)
Preceding gene: 220918129
Following gene: 220918124
Centisome position: 66.67
GC content: 70.63
Gene sequence:
>429_bases GTGACCGCCGCCCGGACGCTCGCCCTCGTCGCCGCCGCCCTCGCCCTCGCCGCCTGCGGCAAGAGCAAGGAGGAGAAGGC GTACGACGACCTGGGGCGGCAGTGCAATGCGCTGGCCGCGAGCGGGGCGACGCTCGACCAGGCCGAGCTGGTGTTCCGCT ACAGGGACGTGTTCACGGGCATGCAGTGCGGCCTGCCGCTCACCTCGACGGGCGCCGGGGACCTGTGCGGCGCGGCCTCG GACACGAACGTCCTCTGCATCATGGACTGGTCGTACTACCCGAACGACTCGAACATCTGCGGGCCGACGGGCTGCTGGCT GGGCTGCGAGGTCCGGGTGAGGCAGGCGGACTTCCAGACGAGCGGCACCGCCGCCGTGATCTGCGCGGCTCGCTGGTTCG ACCAGAATCCGACGTACCAGTCCTTCTAG
Upstream 100 bases:
>100_bases ATCGAGGCCGGGCGGCGCGACCCTCCCCGGCCGGGAGCTGGTCTTATCCCGCCCCAGCGAGCCCCTGGCAAGGGGCCGCA CCCGGCGATAACGTGCGCTC
Downstream 100 bases:
>100_bases CGAACGGGAGCGCACATGAAGGCGGTCCTGATCCGCGGCCACGGCGGCCCAGAGCGCGTCGAGGTCGGCGAGCTTCCGCT GCCGGAGCCCGGCCCGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MTAARTLALVAAALALAACGKSKEEKAYDDLGRQCNALAASGATLDQAELVFRYRDVFTGMQCGLPLTSTGAGDLCGAAS DTNVLCIMDWSYYPNDSNICGPTGCWLGCEVRVRQADFQTSGTAAVICAARWFDQNPTYQSF
Sequences:
>Translated_142_residues MTAARTLALVAAALALAACGKSKEEKAYDDLGRQCNALAASGATLDQAELVFRYRDVFTGMQCGLPLTSTGAGDLCGAAS DTNVLCIMDWSYYPNDSNICGPTGCWLGCEVRVRQADFQTSGTAAVICAARWFDQNPTYQSF >Mature_141_residues TAARTLALVAAALALAACGKSKEEKAYDDLGRQCNALAASGATLDQAELVFRYRDVFTGMQCGLPLTSTGAGDLCGAASD TNVLCIMDWSYYPNDSNICGPTGCWLGCEVRVRQADFQTSGTAAVICAARWFDQNPTYQSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15084; Mature: 14953
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 6.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAARTLALVAAALALAACGKSKEEKAYDDLGRQCNALAASGATLDQAELVFRYRDVFTG CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC MQCGLPLTSTGAGDLCGAASDTNVLCIMDWSYYPNDSNICGPTGCWLGCEVRVRQADFQT HHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCEEEEEECCCCC SGTAAVICAARWFDQNPTYQSF CCCEEEEEEEHHCCCCCCCCCC >Mature Secondary Structure TAARTLALVAAALALAACGKSKEEKAYDDLGRQCNALAASGATLDQAELVFRYRDVFTG CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC MQCGLPLTSTGAGDLCGAASDTNVLCIMDWSYYPNDSNICGPTGCWLGCEVRVRQADFQT HHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCEEEEEECCCCC SGTAAVICAARWFDQNPTYQSF CCCEEEEEEEHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA