Click here to switch to the map view.

The map label for this gene is gcvT [H]

Identifier: 220918129

GI number: 220918129

Start: 3354517

End: 3355431

Strand: Reverse

Name: gcvT [H]

Synonym: A2cp1_3032

Alternate gene names: 220918129

Gene position: 3355431-3354517 (Counterclockwise)

Preceding gene: 220918130

Following gene: 220918125

Centisome position: 66.72

GC content: 77.49

Gene sequence:

>915_bases
GTGAGCCTCCACGAACGACTCCGCGCCGCGCGCGAGGGCTGGGCCGTCGGCCCGGTGCTCGAGCGCGCCTTCCTGCGCGT
CACCGGCAAGGACGCCCAGGACTACCTGCACCGCATGTCCACCCAGGACCTCGCCCGCCTGAAGCCGGGCGAGTCCGCCT
ACGCCGCGTTCCTGAACGCGAAGGGGCACCTGCTCGGCGAGGGACACGTGCTGGCGCGCGAGGGCGAGGTCCTCGTCGAG
CTCGACCCGGCGGCCGCGCCGGAGACGCGCGCGCTGCTGGAGAAGCTCGTCATCATGGACGACGTGACGTTCGAGGACCT
GTCGGCGACGCTGCGCGCGCTGCCGGTGCTCGGGCCGGAGGGGCCGGCGAAGCTGGGCGGGCGCGCGGGCTCGGCGCCGG
TGGTTCCCACCGCGCGCCGCGGCGCGCCCTGCATGGACGTGTGGGCGCCGGCGGCCGAGGCGGAGGCGCTGCGGGCCGCG
CTGGTCGCGGACGGGGCGGCGCCGCTCGACCTCGCCGAGCTGGAGTCGCTGCGGATCCTGGCGGGCGTGGCGCGCTTCGG
CGCCGACATGGACGCGAGCCGGCTGCCGATGGAGGCCGGGCTCACCCGCGCGGCCATCTCGTTCACGAAGGGCTGCTACA
TCGGGCAGGAGGTGGTGCTCCGGGCCACCGCGCGCGGCCACCTGCAGCGCGGCCTGGTGCAGCTCGAGCTGCCGCCCGGC
GCTCGCCCCGGCACGCCGCTCGTCGCCGGCGGCCAGGAGGTCGGCGCGGTCACCAGCGTCGCCGAGACGCCGGAGGGCCG
CCTCGGCCTCGGCTACCTGCGGCGCGCCCACTGGAAGCCCGGCGAGCGCGTGCGGGCGGGCGAGGGCGAGGCGGTGGTGC
GGGCCGTGATCGTGGAGGACGGCGTGGTCGCCTGA

Upstream 100 bases:

>100_bases
CGGGGCCATGGTGATCGCGGGCGTGATCCTGACCGAGCGCGGGTAGCCCCCGGCGCCGCGCGCCTTGAGCCGGCGCCGCG
CCCGCGTTATCCACGGGGGC

Downstream 100 bases:

>100_bases
CGCTCGCCCTTCGACGGGCTCAGGGCGAACGGATCCCGACGAGCCCGCTCACCCGGCCCGCTCGCTCATCCCGAGCGTAG
CGCGGCCCTTGCGGCCGCGC

Product: folate-binding protein YgfZ

Products: NA

Alternate protein names: Glycine cleavage system T protein [H]

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MSLHERLRAAREGWAVGPVLERAFLRVTGKDAQDYLHRMSTQDLARLKPGESAYAAFLNAKGHLLGEGHVLAREGEVLVE
LDPAAAPETRALLEKLVIMDDVTFEDLSATLRALPVLGPEGPAKLGGRAGSAPVVPTARRGAPCMDVWAPAAEAEALRAA
LVADGAAPLDLAELESLRILAGVARFGADMDASRLPMEAGLTRAAISFTKGCYIGQEVVLRATARGHLQRGLVQLELPPG
ARPGTPLVAGGQEVGAVTSVAETPEGRLGLGYLRRAHWKPGERVRAGEGEAVVRAVIVEDGVVA

Sequences:

>Translated_304_residues
MSLHERLRAAREGWAVGPVLERAFLRVTGKDAQDYLHRMSTQDLARLKPGESAYAAFLNAKGHLLGEGHVLAREGEVLVE
LDPAAAPETRALLEKLVIMDDVTFEDLSATLRALPVLGPEGPAKLGGRAGSAPVVPTARRGAPCMDVWAPAAEAEALRAA
LVADGAAPLDLAELESLRILAGVARFGADMDASRLPMEAGLTRAAISFTKGCYIGQEVVLRATARGHLQRGLVQLELPPG
ARPGTPLVAGGQEVGAVTSVAETPEGRLGLGYLRRAHWKPGERVRAGEGEAVVRAVIVEDGVVA
>Mature_303_residues
SLHERLRAAREGWAVGPVLERAFLRVTGKDAQDYLHRMSTQDLARLKPGESAYAAFLNAKGHLLGEGHVLAREGEVLVEL
DPAAAPETRALLEKLVIMDDVTFEDLSATLRALPVLGPEGPAKLGGRAGSAPVVPTARRGAPCMDVWAPAAEAEALRAAL
VADGAAPLDLAELESLRILAGVARFGADMDASRLPMEAGLTRAAISFTKGCYIGQEVVLRATARGHLQRGLVQLELPPGA
RPGTPLVAGGQEVGAVTSVAETPEGRLGLGYLRRAHWKPGERVRAGEGEAVVRAVIVEDGVVA

Specific function: The glycine cleavage system catalyzes the degradation of glycine [H]

COG id: COG0354

COG function: function code R; Predicted aminomethyltransferase related to GcvT

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gcvT family [H]

Homologues:

Organism=Homo sapiens, GI58197556, Length=316, Percent_Identity=32.2784810126582, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013977
- InterPro:   IPR006222
- InterPro:   IPR006223
- InterPro:   IPR022903 [H]

Pfam domain/function: PF01571 GCV_T; PF08669 GCV_T_C [H]

EC number: =2.1.2.10 [H]

Molecular weight: Translated: 31950; Mature: 31819

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLHERLRAAREGWAVGPVLERAFLRVTGKDAQDYLHRMSTQDLARLKPGESAYAAFLNA
CCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHCHHHHHHCCCCCHHHHHHHCC
KGHLLGEGHVLAREGEVLVELDPAAAPETRALLEKLVIMDDVTFEDLSATLRALPVLGPE
CCCEEECCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
GPAKLGGRAGSAPVVPTARRGAPCMDVWAPAAEAEALRAALVADGAAPLDLAELESLRIL
CCHHHCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
AGVARFGADMDASRLPMEAGLTRAAISFTKGCYIGQEVVLRATARGHLQRGLVQLELPPG
HHHHHHCCCCCHHHCCHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCEEEEECCCC
ARPGTPLVAGGQEVGAVTSVAETPEGRLGLGYLRRAHWKPGERVRAGEGEAVVRAVIVED
CCCCCCEEECCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCEECCCCCEEEEEEEECC
GVVA
CCCC
>Mature Secondary Structure 
SLHERLRAAREGWAVGPVLERAFLRVTGKDAQDYLHRMSTQDLARLKPGESAYAAFLNA
CHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHCHHHHHHCCCCCHHHHHHHCC
KGHLLGEGHVLAREGEVLVELDPAAAPETRALLEKLVIMDDVTFEDLSATLRALPVLGPE
CCCEEECCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
GPAKLGGRAGSAPVVPTARRGAPCMDVWAPAAEAEALRAALVADGAAPLDLAELESLRIL
CCHHHCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
AGVARFGADMDASRLPMEAGLTRAAISFTKGCYIGQEVVLRATARGHLQRGLVQLELPPG
HHHHHHCCCCCHHHCCHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCEEEEECCCC
ARPGTPLVAGGQEVGAVTSVAETPEGRLGLGYLRRAHWKPGERVRAGEGEAVVRAVIVED
CCCCCCEEECCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCEECCCCCEEEEEEEECC
GVVA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA