Click here to switch to the map view.

The map label for this gene is yccZ [C]

Identifier: 220918050

GI number: 220918050

Start: 3263315

End: 3263947

Strand: Direct

Name: yccZ [C]

Synonym: A2cp1_2951

Alternate gene names: 220918050

Gene position: 3263315-3263947 (Clockwise)

Preceding gene: 220918048

Following gene: 220918051

Centisome position: 64.89

GC content: 75.04

Gene sequence:

>633_bases
ATGATCGATCCGCTCGCTGCCACCGCGCGCCGTCGCGCGGGCCTCGCGCTCGCCGCCGTCGCCGCCACCGCCCTCGCCGC
CTGCGGGCCGACCGGCCGTTACGTGCGCGCCGAGGACCTGCCGCCCGCGCCGGCCGACGCCGAGTACCGCGTCGCGCGCG
GCGACGTCGTCGGGATCCGGGTCTGGAACCAGGACAACATGTCGGTGGAGCGAACGCGCGTCCGCGAGGACGGGCGCGTG
TCGATGCCGTTCCTCCAGGACGTCCCGGCGGCGGGGAGCACGCCGACCGAGCTCTCCCAGCGGATCCAGACGCAGCTCAA
GACCTACGTCGTGAACCCCGTCGTCACCGTGACGGTGGTCGAGATGCAGCCGCTGCGCGTCTCCGTCACCGGCGAGGTGA
TCCGGCCCGGCGTCTACGACCTGGATCGCGGGGCGGGCGTGCTCTCCGCGCTCGCCGCGGCCGGCAGCTTCACCGAGTTC
GCCCACCGGGACCGCGTCTTCGTCCTGCGCCACGGCCCGGCCCCGGGCGACGCGGTGACGCGCATCCGCTTCGAGTACGA
CGCGCTCGTCCGCGCCGACCGGCGATCGGCCGGGTTCCGGCTCCAGCCCGGCGACGTGGTCGTGGTGGAGTGA

Upstream 100 bases:

>100_bases
ACCCGGGTACCCGCACCGGCCGTAGCATCCCGCACGCGCCGCCGCCCTCCCGGGCGGCCGCCTGGGGGAGCCGCGGCGCC
GTCCGCGACGCACGTCCGAC

Downstream 100 bases:

>100_bases
CGGTGGTCGCCGGGGCGGCCCTCGCGCTCGCGTCGCTCCTGGCGGGCGCCGGCGAGCTCCAGCTCGAGCCAGGCCTGCGG
CTCGAGGGGCGCGGGCGCCA

Product: polysaccharide export protein

Products: NA

Alternate protein names: Polysaccharide Biosynthesis/Export Protein

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MIDPLAATARRRAGLALAAVAATALAACGPTGRYVRAEDLPPAPADAEYRVARGDVVGIRVWNQDNMSVERTRVREDGRV
SMPFLQDVPAAGSTPTELSQRIQTQLKTYVVNPVVTVTVVEMQPLRVSVTGEVIRPGVYDLDRGAGVLSALAAAGSFTEF
AHRDRVFVLRHGPAPGDAVTRIRFEYDALVRADRRSAGFRLQPGDVVVVE

Sequences:

>Translated_210_residues
MIDPLAATARRRAGLALAAVAATALAACGPTGRYVRAEDLPPAPADAEYRVARGDVVGIRVWNQDNMSVERTRVREDGRV
SMPFLQDVPAAGSTPTELSQRIQTQLKTYVVNPVVTVTVVEMQPLRVSVTGEVIRPGVYDLDRGAGVLSALAAAGSFTEF
AHRDRVFVLRHGPAPGDAVTRIRFEYDALVRADRRSAGFRLQPGDVVVVE
>Mature_210_residues
MIDPLAATARRRAGLALAAVAATALAACGPTGRYVRAEDLPPAPADAEYRVARGDVVGIRVWNQDNMSVERTRVREDGRV
SMPFLQDVPAAGSTPTELSQRIQTQLKTYVVNPVVTVTVVEMQPLRVSVTGEVIRPGVYDLDRGAGVLSALAAAGSFTEF
AHRDRVFVLRHGPAPGDAVTRIRFEYDALVRADRRSAGFRLQPGDVVVVE

Specific function: May Be Involved In Polysaccharide Transport. [C]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Integral Membrane Protein. Outer Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22633; Mature: 22633

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDPLAATARRRAGLALAAVAATALAACGPTGRYVRAEDLPPAPADAEYRVARGDVVGIR
CCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEECCCEEEEE
VWNQDNMSVERTRVREDGRVSMPFLQDVPAAGSTPTELSQRIQTQLKTYVVNPVVTVTVV
EECCCCCCHHHHHHCCCCCEECCHHHCCCCCCCCHHHHHHHHHHHHHHHEECCEEEEEEE
EMQPLRVSVTGEVIRPGVYDLDRGAGVLSALAAAGSFTEFAHRDRVFVLRHGPAPGDAVT
EECCEEEEEECCEECCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCEEEEEECCCCCCCEE
RIRFEYDALVRADRRSAGFRLQPGDVVVVE
EEEEEHHHHHHHCCCCCCCEECCCCEEEEC
>Mature Secondary Structure
MIDPLAATARRRAGLALAAVAATALAACGPTGRYVRAEDLPPAPADAEYRVARGDVVGIR
CCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEECCCEEEEE
VWNQDNMSVERTRVREDGRVSMPFLQDVPAAGSTPTELSQRIQTQLKTYVVNPVVTVTVV
EECCCCCCHHHHHHCCCCCEECCHHHCCCCCCCCHHHHHHHHHHHHHHHEECCEEEEEEE
EMQPLRVSVTGEVIRPGVYDLDRGAGVLSALAAAGSFTEFAHRDRVFVLRHGPAPGDAVT
EECCEEEEEECCEECCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCEEEEEECCCCCCCEE
RIRFEYDALVRADRRSAGFRLQPGDVVVVE
EEEEEHHHHHHHCCCCCCCEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA