| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220918051
Identifier: 220918051
GI number: 220918051
Start: 3263950
End: 3265158
Strand: Direct
Name: 220918051
Synonym: A2cp1_2952
Alternate gene names: NA
Gene position: 3263950-3265158 (Clockwise)
Preceding gene: 220918050
Following gene: 220918053
Centisome position: 64.9
GC content: 80.31
Gene sequence:
>1209_bases GTGGTCGCCGGGGCGGCCCTCGCGCTCGCGTCGCTCCTGGCGGGCGCCGGCGAGCTCCAGCTCGAGCCAGGCCTGCGGCT CGAGGGGCGCGGGCGCCAGCTCTCGCCGCGGGACGGCGCCGACGACCGGACGCTGGAGGCCGTCGCGACCCCGCGCGCCG CGCTCAGGTGGCTCGCCGCTCCGCGCCTGCGCGTCGGCGGCTCCTACGCGCCGCGCCTCCGCGCGCCCGACCTCACCCGC TCCTCGGACGTGGTGGTGCTGCACACGGCCGAGCTCCGCGCCGAGCTCCACCCGGACGCGGCCTGGCGGCTGTCCGCCGT CGCCGGCGGCGAGCGCGGCACCACCGACCTGCTCACCGAGAGCCGGACGCTCGGGACCGAGCTCCAGACCATCACCACCA CCCGGCGGCTGCGGTACCGGGCCGCGCGGGTCGAGCTCGGTTTGGAGGGCCGCGCCGGGCCTCGCACGGAGCTGCGCGCG CTCGCCGGCGCGTTCCTCGAGGGCGGCGACGGCGCGGCCGCGGAGGCGACGCTGCCGGTCCAGCGCGGCGCGCGCGCCGA GGCGAGCGTCACCTGGGCGCTCACCCGCCTGGACCGCCTCGGCCTGCGCCTCACCGGTCGCGGCGCGCGGCTGGATCGGG GTCCCACCTCCGCCATCGCCACCGCGGACGCGCTCTGGCACCGGCGCCTGGCGCGCGCGGTCGACGCATGGGCGGGCGGG GGCGTGGCCGGCGCCTACGAGGACCCGCGCGGCGACACCGCCACCCGCGAGCTGCTCCCCAGCGGCGAGCTCGGCATCGC CCACACGCCGGTCGCGCCGGCGGCCGCCGCCCCGGGCGAGGAACCGGCCCGGGCCACGCCTTCCACGGCGCTCGCCACCC GGCTCGTGGTCCGCCTCGCGCCCGCGATCGACCGGGCCACCGGCGCCGCCGACCCGCAGCTCGACGCGACGCTCGGCCTC GCCTGGCCGGTCGCCCCGCGGTGGTCGCTCTCGGGCGCCGCGGTGGGCGCCATCGCGCGCCAGTCCGGCCACGACACGCG CCGCGCGCGCCTTGAGGCCGGGCTGCAGTGGGCGGCGACGTCCGCGGTGCACCTCGGGCTCGGCGTCTACGCCAGCCGGC AACGCACGGCCATCCCCAGCGTGCCGTCGTTCGACGAGTCGGGTGCGTTCGTCTCGCTGGACCTCGGCGGTCCCACGCTG AGCCCCTGA
Upstream 100 bases:
>100_bases TGACGCGCATCCGCTTCGAGTACGACGCGCTCGTCCGCGCCGACCGGCGATCGGCCGGGTTCCGGCTCCAGCCCGGCGAC GTGGTCGTGGTGGAGTGACG
Downstream 100 bases:
>100_bases GCCGCGCGGCGACGTCGCCGGACGTCAGGGCGTCCCGCCGGTGCGCCGGGGCGCCGCGGCGACCGCGTCGCGCGTCGGCT GCGCGCGCCGCCGCGCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MVAGAALALASLLAGAGELQLEPGLRLEGRGRQLSPRDGADDRTLEAVATPRAALRWLAAPRLRVGGSYAPRLRAPDLTR SSDVVVLHTAELRAELHPDAAWRLSAVAGGERGTTDLLTESRTLGTELQTITTTRRLRYRAARVELGLEGRAGPRTELRA LAGAFLEGGDGAAAEATLPVQRGARAEASVTWALTRLDRLGLRLTGRGARLDRGPTSAIATADALWHRRLARAVDAWAGG GVAGAYEDPRGDTATRELLPSGELGIAHTPVAPAAAAPGEEPARATPSTALATRLVVRLAPAIDRATGAADPQLDATLGL AWPVAPRWSLSGAAVGAIARQSGHDTRRARLEAGLQWAATSAVHLGLGVYASRQRTAIPSVPSFDESGAFVSLDLGGPTL SP
Sequences:
>Translated_402_residues MVAGAALALASLLAGAGELQLEPGLRLEGRGRQLSPRDGADDRTLEAVATPRAALRWLAAPRLRVGGSYAPRLRAPDLTR SSDVVVLHTAELRAELHPDAAWRLSAVAGGERGTTDLLTESRTLGTELQTITTTRRLRYRAARVELGLEGRAGPRTELRA LAGAFLEGGDGAAAEATLPVQRGARAEASVTWALTRLDRLGLRLTGRGARLDRGPTSAIATADALWHRRLARAVDAWAGG GVAGAYEDPRGDTATRELLPSGELGIAHTPVAPAAAAPGEEPARATPSTALATRLVVRLAPAIDRATGAADPQLDATLGL AWPVAPRWSLSGAAVGAIARQSGHDTRRARLEAGLQWAATSAVHLGLGVYASRQRTAIPSVPSFDESGAFVSLDLGGPTL SP >Mature_402_residues MVAGAALALASLLAGAGELQLEPGLRLEGRGRQLSPRDGADDRTLEAVATPRAALRWLAAPRLRVGGSYAPRLRAPDLTR SSDVVVLHTAELRAELHPDAAWRLSAVAGGERGTTDLLTESRTLGTELQTITTTRRLRYRAARVELGLEGRAGPRTELRA LAGAFLEGGDGAAAEATLPVQRGARAEASVTWALTRLDRLGLRLTGRGARLDRGPTSAIATADALWHRRLARAVDAWAGG GVAGAYEDPRGDTATRELLPSGELGIAHTPVAPAAAAPGEEPARATPSTALATRLVVRLAPAIDRATGAADPQLDATLGL AWPVAPRWSLSGAAVGAIARQSGHDTRRARLEAGLQWAATSAVHLGLGVYASRQRTAIPSVPSFDESGAFVSLDLGGPTL SP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41752; Mature: 41752
Theoretical pI: Translated: 11.00; Mature: 11.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAGAALALASLLAGAGELQLEPGLRLEGRGRQLSPRDGADDRTLEAVATPRAALRWLAA CCCHHHHHHHHHHCCCCCEEECCCCEECCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHC PRLRVGGSYAPRLRAPDLTRSSDVVVLHTAELRAELHPDAAWRLSAVAGGERGTTDLLTE CCEECCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHCCCCCCEEEEEECCCCCCCHHHHHC SRTLGTELQTITTTRRLRYRAARVELGLEGRAGPRTELRALAGAFLEGGDGAAAEATLPV CHHHCCHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCH QRGARAEASVTWALTRLDRLGLRLTGRGARLDRGPTSAIATADALWHRRLARAVDAWAGG HCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC GVAGAYEDPRGDTATRELLPSGELGIAHTPVAPAAAAPGEEPARATPSTALATRLVVRLA CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH PAIDRATGAADPQLDATLGLAWPVAPRWSLSGAAVGAIARQSGHDTRRARLEAGLQWAAT HHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHH SAVHLGLGVYASRQRTAIPSVPSFDESGAFVSLDLGGPTLSP HHHHCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCC >Mature Secondary Structure MVAGAALALASLLAGAGELQLEPGLRLEGRGRQLSPRDGADDRTLEAVATPRAALRWLAA CCCHHHHHHHHHHCCCCCEEECCCCEECCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHC PRLRVGGSYAPRLRAPDLTRSSDVVVLHTAELRAELHPDAAWRLSAVAGGERGTTDLLTE CCEECCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHCCCCCCEEEEEECCCCCCCHHHHHC SRTLGTELQTITTTRRLRYRAARVELGLEGRAGPRTELRALAGAFLEGGDGAAAEATLPV CHHHCCHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCH QRGARAEASVTWALTRLDRLGLRLTGRGARLDRGPTSAIATADALWHRRLARAVDAWAGG HCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC GVAGAYEDPRGDTATRELLPSGELGIAHTPVAPAAAAPGEEPARATPSTALATRLVVRLA CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH PAIDRATGAADPQLDATLGLAWPVAPRWSLSGAAVGAIARQSGHDTRRARLEAGLQWAAT HHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHH SAVHLGLGVYASRQRTAIPSVPSFDESGAFVSLDLGGPTLSP HHHHCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA