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The map label for this gene is epsD [H]

Identifier: 220918048

GI number: 220918048

Start: 3260152

End: 3261291

Strand: Direct

Name: epsD [H]

Synonym: A2cp1_2949

Alternate gene names: 220918048

Gene position: 3260152-3261291 (Clockwise)

Preceding gene: 220918047

Following gene: 220918050

Centisome position: 64.82

GC content: 76.05

Gene sequence:

>1140_bases
GTGAGCGCGGCGAAGGTGCTCGTGTTCCAGAACCGCTTCCTGATCGGCGGACAGGAGCGGCAGACGGTCCTGAACGTCCA
GACCATGGACCGGGGCCGCTGGGAGCCGGTGGTCGCGTGCCTGCACCTCGAGGGCGAGCACCTCGACGACCTGGCGCGCG
AGGGCATCCGGCCGGTGCTGTTCGACGTGGGGCGGCGGATGCTCCGGCCCAACACCGCCTGGCAGGTCTCGCGCATCGCC
CGCTTCGTGCGCGAGCAGGGCATCGCGCTGGTGCACGCGCAGGACATCTACACGAACGTGCTGGGCTCGCTCGCCGCGCG
GCTGGCCGGCGTGCCCGTGATCGTGACGCGGGTGGACCTCGGGCACCACATCACCGGTTACCGCCGCCCGCTCACCCGCC
TCGCCTGCCTCCGCGCCGACCGCGTGCTCGTGAACGCGATGTGCATCCGCGACCTCGTGATCCGCGAGGGCGTCGAGCCG
GACCGCGTGGCGGTGGTGCGCAACGGCGTGGACCTCCGCGCGCTCGACCGCGCCGCGCGCGAGCTGCCCGACCCCGGGCT
GCCCGAGGGCGCCTGGATCGCGAACGTCGCGAACATGCACCATCCGGTGAAGGGCCAGACCGACCTGCTGGTCGCGTTCC
GGGAGGTGCTCCGCGAGCACCCGACCGCGCGGCTCGCGCTGGTGGGCGACGGGGTGCGGCGGCCGCTGCTGGAGCGGCTC
GCGGGCCAGCTCGGCGTCGCCGCGCGGGTCCACTTCCTCGGCTTCCGCCGCGACGCGCCCGCCGTGCTCGCGCGCTGCGC
CGCCGCCGCGTCCTCCAGCCACGCCGAGGGGATCTCGAACGCGATCCTGGAGGCCATGGCCCTGCGCCTGCCGGTGGTCG
CCACCGCCGTGGGCGGCTCGCCGGAGCTGGTGCGCGACGGGACGACCGGCTGGCTCGTGCCGCCCGGCTCGCCGGGCGCG
CTGGCGCGCCGCCTCTGCGACGCGCTCGCGGACGGGGAGCGCGCCCGGCGGATGGGCGCGCGCGGGCGGGCGCTGGTGGA
GCGCGAGTTCGAGGTCGGGCAGATGCGGCTCGGCTACGACGCGCTCTACGACGAGCTGGCCGGCTGGCGCGTCCCCCGCC
TGATCGCCGGCAGCGCGTGA

Upstream 100 bases:

>100_bases
GCACCTTCGCCGCGCTCGCCGCCGCGCCGGGTCGGCCGGTGCCGCTCGCGCGCCCGGGCGCGGGCGGCGCGCGCGCCGCG
GCGGCGGCGGAGGTGGCGCC

Downstream 100 bases:

>100_bases
GCCCCGGAGCGCCGAGGGCCCGGGCGCGCCCGGCCCTGCCGGACGCCTCCGGGCCCCCCATGGCCGGCCGCGCTACTGCG
CGCCGCGGGCGCCGAGCACG

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MSAAKVLVFQNRFLIGGQERQTVLNVQTMDRGRWEPVVACLHLEGEHLDDLAREGIRPVLFDVGRRMLRPNTAWQVSRIA
RFVREQGIALVHAQDIYTNVLGSLAARLAGVPVIVTRVDLGHHITGYRRPLTRLACLRADRVLVNAMCIRDLVIREGVEP
DRVAVVRNGVDLRALDRAARELPDPGLPEGAWIANVANMHHPVKGQTDLLVAFREVLREHPTARLALVGDGVRRPLLERL
AGQLGVAARVHFLGFRRDAPAVLARCAAAASSSHAEGISNAILEAMALRLPVVATAVGGSPELVRDGTTGWLVPPGSPGA
LARRLCDALADGERARRMGARGRALVEREFEVGQMRLGYDALYDELAGWRVPRLIAGSA

Sequences:

>Translated_379_residues
MSAAKVLVFQNRFLIGGQERQTVLNVQTMDRGRWEPVVACLHLEGEHLDDLAREGIRPVLFDVGRRMLRPNTAWQVSRIA
RFVREQGIALVHAQDIYTNVLGSLAARLAGVPVIVTRVDLGHHITGYRRPLTRLACLRADRVLVNAMCIRDLVIREGVEP
DRVAVVRNGVDLRALDRAARELPDPGLPEGAWIANVANMHHPVKGQTDLLVAFREVLREHPTARLALVGDGVRRPLLERL
AGQLGVAARVHFLGFRRDAPAVLARCAAAASSSHAEGISNAILEAMALRLPVVATAVGGSPELVRDGTTGWLVPPGSPGA
LARRLCDALADGERARRMGARGRALVEREFEVGQMRLGYDALYDELAGWRVPRLIAGSA
>Mature_378_residues
SAAKVLVFQNRFLIGGQERQTVLNVQTMDRGRWEPVVACLHLEGEHLDDLAREGIRPVLFDVGRRMLRPNTAWQVSRIAR
FVREQGIALVHAQDIYTNVLGSLAARLAGVPVIVTRVDLGHHITGYRRPLTRLACLRADRVLVNAMCIRDLVIREGVEPD
RVAVVRNGVDLRALDRAARELPDPGLPEGAWIANVANMHHPVKGQTDLLVAFREVLREHPTARLALVGDGVRRPLLERLA
GQLGVAARVHFLGFRRDAPAVLARCAAAASSSHAEGISNAILEAMALRLPVVATAVGGSPELVRDGTTGWLVPPGSPGAL
ARRLCDALADGERARRMGARGRALVEREFEVGQMRLGYDALYDELAGWRVPRLIAGSA

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 41353; Mature: 41221

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAKVLVFQNRFLIGGQERQTVLNVQTMDRGRWEPVVACLHLEGEHLDDLAREGIRPVL
CCCCEEEEEECCEEECCCCCCEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHCCCHHHH
FDVGRRMLRPNTAWQVSRIARFVREQGIALVHAQDIYTNVLGSLAARLAGVPVIVTRVDL
HHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEECC
GHHITGYRRPLTRLACLRADRVLVNAMCIRDLVIREGVEPDRVAVVRNGVDLRALDRAAR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHH
ELPDPGLPEGAWIANVANMHHPVKGQTDLLVAFREVLREHPTARLALVGDGVRRPLLERL
HCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
AGQLGVAARVHFLGFRRDAPAVLARCAAAASSSHAEGISNAILEAMALRLPVVATAVGGS
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEECCCC
PELVRDGTTGWLVPPGSPGALARRLCDALADGERARRMGARGRALVEREFEVGQMRLGYD
CHHEECCCCCEEECCCCCHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHCCHH
ALYDELAGWRVPRLIAGSA
HHHHHHHCCCCCHHHCCCC
>Mature Secondary Structure 
SAAKVLVFQNRFLIGGQERQTVLNVQTMDRGRWEPVVACLHLEGEHLDDLAREGIRPVL
CCCEEEEEECCEEECCCCCCEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHCCCHHHH
FDVGRRMLRPNTAWQVSRIARFVREQGIALVHAQDIYTNVLGSLAARLAGVPVIVTRVDL
HHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEECC
GHHITGYRRPLTRLACLRADRVLVNAMCIRDLVIREGVEPDRVAVVRNGVDLRALDRAAR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHH
ELPDPGLPEGAWIANVANMHHPVKGQTDLLVAFREVLREHPTARLALVGDGVRRPLLERL
HCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
AGQLGVAARVHFLGFRRDAPAVLARCAAAASSSHAEGISNAILEAMALRLPVVATAVGGS
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEECCCC
PELVRDGTTGWLVPPGSPGALARRLCDALADGERARRMGARGRALVEREFEVGQMRLGYD
CHHEECCCCCEEECCCCCHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHCCHH
ALYDELAGWRVPRLIAGSA
HHHHHHHCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]