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The map label for this gene is ccsA [H]

Identifier: 220915979

GI number: 220915979

Start: 972407

End: 973264

Strand: Reverse

Name: ccsA [H]

Synonym: A2cp1_0865

Alternate gene names: 220915979

Gene position: 973264-972407 (Counterclockwise)

Preceding gene: 220915980

Following gene: 220915977

Centisome position: 19.35

GC content: 71.33

Gene sequence:

>858_bases
ATGCTCCAGTACATCCTCGCCGAGCACCCCTTCTTCGTGGCCACCGGCGCGCTGTACGCGGCCGCGGCCGGCTTCTACGC
CGCCGCCTGGCGCTCCACCCGCGCGCTGGTCGGGCGCGCCGCGACCGCGCTGCTCTGCGCCGCGCTGGCGTTCAACGCCG
GCCTGATCGTGGAGCGCTGGATCGAGGCGGGCCGCGCGCCGTTCAAGTCGCTGTTCGAGTCGCTGGTGTTCTTCGCGTTC
ACCACCGGCGTGGTGTACCTCGCGTTCGAGCGGCTCTACCGCACCCGCGTGTTCGGCGCGCTCGCGGCGCTCCTCACGCT
GGCGCTGCTCGGCTACGCGCTCGGCAAGTGGGACGCCGAGATCGTGAAGCTGCCGCCGGCGCTCCAGTCCGCCTGGTTCG
TGCCGCACGTGGTGGTCTACTTCGTGGGCTATGCGGCGGTGGCGCTCGCGGCGCTGCTCGCCGCGGTGCAGCTCCTCGCC
CCGCGCGTGCCGCTCCTGCAGCGGCTCACCACCCTGCGCGCCGGGACCATCCTCACCGGCAAGGCGCTCGACCTCGAGCA
GATGACCTACGAGCTCATCCGCTTCGGGTTCGTGCTGCTCACGGTCGGCCTGCTGGTCGGCTCGGTGTGGGCGAAGAGCG
CCTGGGGCGACTTCTGGGTGTGGGATCCGAAGGAGAACTGGTCGCTCGTGACCTGGCTCGTCTACGGGGCCTACCTGCAC
CTGCGCAAGGTGCGCGGCTGGCGAGGCGACCGCGCCGCGTGGCTGGTGCTCCTCGGCTTCGCGGTGGTGATGTTCACGTA
CCTCGGGATGAGCATGCTGCCCACCGCCGAGGAGAGCGCGCACGTCTACACCGGGTAG

Upstream 100 bases:

>100_bases
GTGGCGTACATGTTCTACGTCGAGCCGCGCCTGAAGGCGCGCCGCCGCGCCCAGCCCGGCGTCCCCACCTCCCCCGCGCA
GGCCGCCTGAGGAGAACGCG

Downstream 100 bases:

>100_bases
CACCGATCTCCAGGGAGAGCGCGCGCCCCCGCGCGCTCGGGGCCGCCCGGCACACCACTGCCGGGCGGTCTTTTTTTCGG
GCCCGCGGGCGGGAAGGGAG

Product: cytochrome c-type biogenesis protein CcsB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MLQYILAEHPFFVATGALYAAAAGFYAAAWRSTRALVGRAATALLCAALAFNAGLIVERWIEAGRAPFKSLFESLVFFAF
TTGVVYLAFERLYRTRVFGALAALLTLALLGYALGKWDAEIVKLPPALQSAWFVPHVVVYFVGYAAVALAALLAAVQLLA
PRVPLLQRLTTLRAGTILTGKALDLEQMTYELIRFGFVLLTVGLLVGSVWAKSAWGDFWVWDPKENWSLVTWLVYGAYLH
LRKVRGWRGDRAAWLVLLGFAVVMFTYLGMSMLPTAEESAHVYTG

Sequences:

>Translated_285_residues
MLQYILAEHPFFVATGALYAAAAGFYAAAWRSTRALVGRAATALLCAALAFNAGLIVERWIEAGRAPFKSLFESLVFFAF
TTGVVYLAFERLYRTRVFGALAALLTLALLGYALGKWDAEIVKLPPALQSAWFVPHVVVYFVGYAAVALAALLAAVQLLA
PRVPLLQRLTTLRAGTILTGKALDLEQMTYELIRFGFVLLTVGLLVGSVWAKSAWGDFWVWDPKENWSLVTWLVYGAYLH
LRKVRGWRGDRAAWLVLLGFAVVMFTYLGMSMLPTAEESAHVYTG
>Mature_285_residues
MLQYILAEHPFFVATGALYAAAAGFYAAAWRSTRALVGRAATALLCAALAFNAGLIVERWIEAGRAPFKSLFESLVFFAF
TTGVVYLAFERLYRTRVFGALAALLTLALLGYALGKWDAEIVKLPPALQSAWFVPHVVVYFVGYAAVALAALLAAVQLLA
PRVPLLQRLTTLRAGTILTGKALDLEQMTYELIRFGFVLLTVGLLVGSVWAKSAWGDFWVWDPKENWSLVTWLVYGAYLH
LRKVRGWRGDRAAWLVLLGFAVVMFTYLGMSMLPTAEESAHVYTG

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR017562 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 31408; Mature: 31408

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQYILAEHPFFVATGALYAAAAGFYAAAWRSTRALVGRAATALLCAALAFNAGLIVERW
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
IEAGRAPFKSLFESLVFFAFTTGVVYLAFERLYRTRVFGALAALLTLALLGYALGKWDAE
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
IVKLPPALQSAWFVPHVVVYFVGYAAVALAALLAAVQLLAPRVPLLQRLTTLRAGTILTG
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEC
KALDLEQMTYELIRFGFVLLTVGLLVGSVWAKSAWGDFWVWDPKENWSLVTWLVYGAYLH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHH
LRKVRGWRGDRAAWLVLLGFAVVMFTYLGMSMLPTAEESAHVYTG
HHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLQYILAEHPFFVATGALYAAAAGFYAAAWRSTRALVGRAATALLCAALAFNAGLIVERW
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
IEAGRAPFKSLFESLVFFAFTTGVVYLAFERLYRTRVFGALAALLTLALLGYALGKWDAE
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
IVKLPPALQSAWFVPHVVVYFVGYAAVALAALLAAVQLLAPRVPLLQRLTTLRAGTILTG
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEC
KALDLEQMTYELIRFGFVLLTVGLLVGSVWAKSAWGDFWVWDPKENWSLVTWLVYGAYLH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHH
LRKVRGWRGDRAAWLVLLGFAVVMFTYLGMSMLPTAEESAHVYTG
HHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA