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The map label for this gene is 220915980

Identifier: 220915980

GI number: 220915980

Start: 973275

End: 974903

Strand: Reverse

Name: 220915980

Synonym: A2cp1_0866

Alternate gene names: NA

Gene position: 974903-973275 (Counterclockwise)

Preceding gene: 220915982

Following gene: 220915979

Centisome position: 19.38

GC content: 75.87

Gene sequence:

>1629_bases
GTGACCGACAGCCCGACCCGCCCCACGCCCAGGCCCGCCGGCGCCGCCGAGGCGCCCGCCGTGATGGAAGCGCGCCTCAC
CGCGCTGCTCGTCACCGGCGCGCTGCTCGCCGGCGCGCTGCTCCAGGTCTGGGTCCCGCCGGGCGCGCTCACGCTGGTGG
TGGCGAGCGGCATCGCGGGCGCGGTGGTGCTCGCGGTGGCCCTGCTCACGCCCGGGCGGCTGCGCGCCACCATCGCCGGC
TTCCGCTTCACCTCCACGCTGCTGGTGGCGCTGGCGGTGTTCGCCATCGTCGGCACGCTGGTGCTGCAGGGCAAGCCGGC
CGAGTTCTACCGGCTCCGCTACGGCGCGGCCGCGCCGGTGATCCTCGGCCTGCACCTCGACGACGTCTTCCACGGCCTGC
CGTTCGCGGGGCTCATGGCGCTGTTCGGCGCGGCGGTGATCGCGTCCGCGGCGCAGCGCTGGCCGCTCCGCGCGCGCAAC
GCCGGCTTCTTCCTGTGCCACCTCGGCCTCGTCACCTCGCTGGGCGGTGCGGCCGCGTCGGCCGCGCTCTCCATCCGCGG
CCGCATCGACCTGCACGCGGGCGGCGAGACGGCCACCCACGTGCGCGTCACCAAGGCGGGGATGGGCACCGGCGGCGCGG
CGCCGCTCGGCTTCGACCTGCGCCTCGATCGGTTCGACCTCGTGAACTACGAGACCGAGTACCGCGTCGGCTACTACCGC
CAGGAGCTGGTCCGGGACGAGCACGGCACGCACCGTCAGTGGAAGCTCGCCGCGAGCTTCGACCCGGACCTCGAGCGCCA
CCTCCTGCCCGGCGGCGACACGTTCCGCCTGAAGGAGATCTGGCCCGACTTCACGCTGCAGGACCAGGTGGCGCCGGTCG
CGGCGGGCGGGCAGCCCGCGCTGCAGGCGACGCTGGAGGGGCAGACGCGCTGGCTGCTGCCGGGCGAGCGGCTCGCCACC
CCCGACGGCCGCGCCGCGGTGGTGTTCGGCTGGGAGCGCCCCGCCGCCCCGCCGGGCGCGCTCACCGCGTTCCTCGTCTC
CGGCGCGGAGCGGAAGGTGGTCGTCCACACCGCCGACGGCGAGTCGGAGGTCCCGCTCGCCGAGGGGCTCGCGCTCGCGG
GGGGCGCGGTGAGGCTCGGCGCGCTCGTCCCGCAGGCGCAGCGGACGCAGGTGCCCGCCACGGCGTCGGCCGAGTGGAAG
CGCCCGGTGGTCCGGCTCGAGGCGGTGCGCGACGGCACGGCGGCCGAGAAGGTGATGGCCGCGGACCGGCCCGAGGCGCT
GTTCCTCGACGCCGATCACGCGCTGGTCTTCGAGCGCCGCGACGGCGAGGTGAAGGCGTTCCTCTCGACGGTCACCGCCA
CGCGCGGCGACGAGTCGCTGCGCACCGTGGTGGCGGTGAACGAGCCGGTCACGTTCGCGGGCTGGACGCTCTACCAGGTG
AACTACAACCCGCAGGATCCCAGCTACTCCGGCCTGGAGGCGGTGCACGACCCCGGGGTGGCCTGGGTGTTCGCCGGGTT
CGCGCTCATCAGCCTGGGCGTGGCGTACATGTTCTACGTCGAGCCGCGCCTGAAGGCGCGCCGCCGCGCCCAGCCCGGCG
TCCCCACCTCCCCCGCGCAGGCCGCCTGA

Upstream 100 bases:

>100_bases
GGACGGCCGGGTCTGCCCGCGATCCCGCGGTGTTGGCCGCTTCGGACGGGGCACGGCGATTGCTCAGGGTGCGCGTCGAA
CGGCCGCATCGGAGGTGCCA

Downstream 100 bases:

>100_bases
GGAGAACGCGATGCTCCAGTACATCCTCGCCGAGCACCCCTTCTTCGTGGCCACCGGCGCGCTGTACGCGGCCGCGGCCG
GCTTCTACGCCGCCGCCTGG

Product: LigA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 542; Mature: 541

Protein sequence:

>542_residues
MTDSPTRPTPRPAGAAEAPAVMEARLTALLVTGALLAGALLQVWVPPGALTLVVASGIAGAVVLAVALLTPGRLRATIAG
FRFTSTLLVALAVFAIVGTLVLQGKPAEFYRLRYGAAAPVILGLHLDDVFHGLPFAGLMALFGAAVIASAAQRWPLRARN
AGFFLCHLGLVTSLGGAAASAALSIRGRIDLHAGGETATHVRVTKAGMGTGGAAPLGFDLRLDRFDLVNYETEYRVGYYR
QELVRDEHGTHRQWKLAASFDPDLERHLLPGGDTFRLKEIWPDFTLQDQVAPVAAGGQPALQATLEGQTRWLLPGERLAT
PDGRAAVVFGWERPAAPPGALTAFLVSGAERKVVVHTADGESEVPLAEGLALAGGAVRLGALVPQAQRTQVPATASAEWK
RPVVRLEAVRDGTAAEKVMAADRPEALFLDADHALVFERRDGEVKAFLSTVTATRGDESLRTVVAVNEPVTFAGWTLYQV
NYNPQDPSYSGLEAVHDPGVAWVFAGFALISLGVAYMFYVEPRLKARRRAQPGVPTSPAQAA

Sequences:

>Translated_542_residues
MTDSPTRPTPRPAGAAEAPAVMEARLTALLVTGALLAGALLQVWVPPGALTLVVASGIAGAVVLAVALLTPGRLRATIAG
FRFTSTLLVALAVFAIVGTLVLQGKPAEFYRLRYGAAAPVILGLHLDDVFHGLPFAGLMALFGAAVIASAAQRWPLRARN
AGFFLCHLGLVTSLGGAAASAALSIRGRIDLHAGGETATHVRVTKAGMGTGGAAPLGFDLRLDRFDLVNYETEYRVGYYR
QELVRDEHGTHRQWKLAASFDPDLERHLLPGGDTFRLKEIWPDFTLQDQVAPVAAGGQPALQATLEGQTRWLLPGERLAT
PDGRAAVVFGWERPAAPPGALTAFLVSGAERKVVVHTADGESEVPLAEGLALAGGAVRLGALVPQAQRTQVPATASAEWK
RPVVRLEAVRDGTAAEKVMAADRPEALFLDADHALVFERRDGEVKAFLSTVTATRGDESLRTVVAVNEPVTFAGWTLYQV
NYNPQDPSYSGLEAVHDPGVAWVFAGFALISLGVAYMFYVEPRLKARRRAQPGVPTSPAQAA
>Mature_541_residues
TDSPTRPTPRPAGAAEAPAVMEARLTALLVTGALLAGALLQVWVPPGALTLVVASGIAGAVVLAVALLTPGRLRATIAGF
RFTSTLLVALAVFAIVGTLVLQGKPAEFYRLRYGAAAPVILGLHLDDVFHGLPFAGLMALFGAAVIASAAQRWPLRARNA
GFFLCHLGLVTSLGGAAASAALSIRGRIDLHAGGETATHVRVTKAGMGTGGAAPLGFDLRLDRFDLVNYETEYRVGYYRQ
ELVRDEHGTHRQWKLAASFDPDLERHLLPGGDTFRLKEIWPDFTLQDQVAPVAAGGQPALQATLEGQTRWLLPGERLATP
DGRAAVVFGWERPAAPPGALTAFLVSGAERKVVVHTADGESEVPLAEGLALAGGAVRLGALVPQAQRTQVPATASAEWKR
PVVRLEAVRDGTAAEKVMAADRPEALFLDADHALVFERRDGEVKAFLSTVTATRGDESLRTVVAVNEPVTFAGWTLYQVN
YNPQDPSYSGLEAVHDPGVAWVFAGFALISLGVAYMFYVEPRLKARRRAQPGVPTSPAQAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57361; Mature: 57230

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSPTRPTPRPAGAAEAPAVMEARLTALLVTGALLAGALLQVWVPPGALTLVVASGIAG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHHCHHH
AVVLAVALLTPGRLRATIAGFRFTSTLLVALAVFAIVGTLVLQGKPAEFYRLRYGAAAPV
HHHHHHHHHCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEECCCCCCE
ILGLHLDDVFHGLPFAGLMALFGAAVIASAAQRWPLRARNAGFFLCHLGLVTSLGGAAAS
EEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEEHHHHHHCCCHHHH
AALSIRGRIDLHAGGETATHVRVTKAGMGTGGAAPLGFDLRLDRFDLVNYETEYRVGYYR
EEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEEECCEEEECCCCCHHHHHHH
QELVRDEHGTHRQWKLAASFDPDLERHLLPGGDTFRLKEIWPDFTLQDQVAPVAAGGQPA
HHHHHCCCCCCCEEEEEECCCCCHHHHCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCC
LQATLEGQTRWLLPGERLATPDGRAAVVFGWERPAAPPGALTAFLVSGAERKVVVHTADG
EEEEECCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEECCC
ESEVPLAEGLALAGGAVRLGALVPQAQRTQVPATASAEWKRPVVRLEAVRDGTAAEKVMA
CCCCCHHHCHHHCCCCEEHHHHCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHH
ADRPEALFLDADHALVFERRDGEVKAFLSTVTATRGDESLRTVVAVNEPVTFAGWTLYQV
CCCCCEEEEECCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEECCCEEEECEEEEEE
NYNPQDPSYSGLEAVHDPGVAWVFAGFALISLGVAYMFYVEPRLKARRRAQPGVPTSPAQ
ECCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHEEECHHHHHHHCCCCCCCCCCCC
AA
CC
>Mature Secondary Structure 
TDSPTRPTPRPAGAAEAPAVMEARLTALLVTGALLAGALLQVWVPPGALTLVVASGIAG
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHHCHHH
AVVLAVALLTPGRLRATIAGFRFTSTLLVALAVFAIVGTLVLQGKPAEFYRLRYGAAAPV
HHHHHHHHHCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEECCCCCCE
ILGLHLDDVFHGLPFAGLMALFGAAVIASAAQRWPLRARNAGFFLCHLGLVTSLGGAAAS
EEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEEHHHHHHCCCHHHH
AALSIRGRIDLHAGGETATHVRVTKAGMGTGGAAPLGFDLRLDRFDLVNYETEYRVGYYR
EEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEEECCEEEECCCCCHHHHHHH
QELVRDEHGTHRQWKLAASFDPDLERHLLPGGDTFRLKEIWPDFTLQDQVAPVAAGGQPA
HHHHHCCCCCCCEEEEEECCCCCHHHHCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCC
LQATLEGQTRWLLPGERLATPDGRAAVVFGWERPAAPPGALTAFLVSGAERKVVVHTADG
EEEEECCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEECCC
ESEVPLAEGLALAGGAVRLGALVPQAQRTQVPATASAEWKRPVVRLEAVRDGTAAEKVMA
CCCCCHHHCHHHCCCCEEHHHHCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHH
ADRPEALFLDADHALVFERRDGEVKAFLSTVTATRGDESLRTVVAVNEPVTFAGWTLYQV
CCCCCEEEEECCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEECCCEEEECEEEEEE
NYNPQDPSYSGLEAVHDPGVAWVFAGFALISLGVAYMFYVEPRLKARRRAQPGVPTSPAQ
ECCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHEEECHHHHHHHCCCCCCCCCCCC
AA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA