Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is 220905480
Identifier: 220905480
GI number: 220905480
Start: 2674829
End: 2676610
Strand: Reverse
Name: 220905480
Synonym: Ddes_2218
Alternate gene names: NA
Gene position: 2676610-2674829 (Counterclockwise)
Preceding gene: 220905481
Following gene: 220905479
Centisome position: 93.15
GC content: 59.03
Gene sequence:
>1782_bases ATGAGAAAATATATGCTGTCCAATAGTGTCGGAAGCCGCGTACGCGTCAAGGCTGTAGATGTTCTGTTTGTTGTTTTGGC TGCATGCTATGCGTTGCTTGTGGCGTCGGGCATTGTGCCCCTGTCAGGGCATGGGGCAAATCTGGACAGCGATCTTTCAG TATACGCATATTCTATGGTCAGGGCAGACAATCCTCAATATTTTCAAGCAGATGAGATTCTGCGTGAACCCACTCCGGCC AACTCGCTCTGGAATCTGCAGCAGTTTGTCGCCGAACTGCTGACGCCGGGCGACCAGTATGCCGTGGGGCTGCTGTGGGC AGGGGCGTTTATCATTTTTGCCTACCTTGTGGGCATGTATCTGCTGGGGCGGTGGCTGTACGGCAGCCCCGGGCCTGCGC TCATTCTGGCTCTGCTCATGAGCGTCACAGTATGGGTGGGTTGGGGAACCTTCTGGGGCGTGACCCATTCCGACCCGGTG CCACGCACGTTTTTTGCGGCCCTGTGGCCCTTTATGCTCATGGGGGCGGTGGTCGCCATGCGTCATGCCTTATGGCGTCC TGTGGCCATGTTGGCCGCGGGGCTGGGCATGTGGGTGCACGGCCTGGGAGCGCTCAATACCGGCGCCATGTTTTTTGTGG CGTTCTTTTTTTGCAGGCCGGCGGGCTGGAGCTGGACAAAACATCTGGGTAATCTGGTCCTGTGCCTGGTATTTTTCTTT GTGCCGGTGCTGACGTTCCTGTGGCCTTCTCTTGGGCAGAAACAGGCTTTCAGCCCGGCAGACATCCAGATGTTTTACGA TCTGTTTTCGCAGCGCTGGGCCAAGGATTACGGCCGGTTCGCCGAACGGCTGGCCTTGTTTTTAAGCTGGGGCAAGCCCA CCTTCTGGATTCTGCTGGCCGGCTTCGCCAGCTGGCTCGTGGTCCGGCGCAATGGCAGCCCCCGGCTGCGGCAACTGGCT GCCATGTGCCCGGCTTTTGTGCTGGCCCTTGCCCTGGTGTCCACCTTTTCATGGCTTGAGTCTCTTCTGGCGCCGCCTAT GGGGCGTTTGCCCATGGCGCATGAGTTTGTGCGCGGGTTGCGCTACCTTATTCCCCTGGCATGGATCATGCTGGTGGGGG TGCTGGCCCTGTTCTGGCCGCGTATGGCAGCCTGGCTGCGCGTGGGCCTTTGTGTTCTTGCGGTGCTGCTCATGCTGCTC TGTAACGGCGACCGGCAAAATGTGGCTGCGCTCTACAGCATAGCCGAGCATACGGGGCTTCCCATGCCCTATATGAGCCG GGCGGAAAGAGCCTCCGGCGAGGCGAAAAAACACCATGAAGCATTGGTCGCCCTTCGGGAGGCAACCATGCCTAATGATG TTGTTTTTAGTAATGCCGGTGATATGGGGGTGCGTCATATTGCCAATCGCGGCATGGGGCACGCCTTTAAAGACGGGGCG CATTCCTACTACAATAAAAATCCCGGGCAGGCCCGGCAGTGGCTTGCCAATGAGAAACTGCGCCTGAAAAGTCCTGCCGG CTATGTGGATGTATGGCTGAAGTCCGGTCTGCCGTGGCTGTTTTGTGACCGGCCTGAAGACCGCGCCATGCTGGAAAAAT ACGGGAACGTGGTGTGGGAAAATTCCGGCTGGCTTATTGTCCGCCGTCATGAGGGCGGCACACCTGCCGGGGGGGATTCC GCCTCTGCTGTTTCGGGCGAAAAAAACGCCCCGACGGAAGGACTCCTGCAAGAGGGCCAGACTCCGGACCAGACGCCCGG CGTTGCAGTGCCCGCGCCGTAG
Upstream 100 bases:
>100_bases ATATGGAGTCAAAACGGCGGCCAGTATATATTGTAAGACGAATATACGCAAAAAATGCTCGGCCCGATGAGTAGAGTATG CTATTTCACTGGAAACATGG
Downstream 100 bases:
>100_bases AATCCGCAGCGCGCGCGGCGGCACGGGCTGTTCTGGCTATATGCCATAAAGGCCGCGATTCTGGCGCATGCGCAGATATC GGTCACGCCGTGTGTTTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 593; Mature: 593
Protein sequence:
>593_residues MRKYMLSNSVGSRVRVKAVDVLFVVLAACYALLVASGIVPLSGHGANLDSDLSVYAYSMVRADNPQYFQADEILREPTPA NSLWNLQQFVAELLTPGDQYAVGLLWAGAFIIFAYLVGMYLLGRWLYGSPGPALILALLMSVTVWVGWGTFWGVTHSDPV PRTFFAALWPFMLMGAVVAMRHALWRPVAMLAAGLGMWVHGLGALNTGAMFFVAFFFCRPAGWSWTKHLGNLVLCLVFFF VPVLTFLWPSLGQKQAFSPADIQMFYDLFSQRWAKDYGRFAERLALFLSWGKPTFWILLAGFASWLVVRRNGSPRLRQLA AMCPAFVLALALVSTFSWLESLLAPPMGRLPMAHEFVRGLRYLIPLAWIMLVGVLALFWPRMAAWLRVGLCVLAVLLMLL CNGDRQNVAALYSIAEHTGLPMPYMSRAERASGEAKKHHEALVALREATMPNDVVFSNAGDMGVRHIANRGMGHAFKDGA HSYYNKNPGQARQWLANEKLRLKSPAGYVDVWLKSGLPWLFCDRPEDRAMLEKYGNVVWENSGWLIVRRHEGGTPAGGDS ASAVSGEKNAPTEGLLQEGQTPDQTPGVAVPAP
Sequences:
>Translated_593_residues MRKYMLSNSVGSRVRVKAVDVLFVVLAACYALLVASGIVPLSGHGANLDSDLSVYAYSMVRADNPQYFQADEILREPTPA NSLWNLQQFVAELLTPGDQYAVGLLWAGAFIIFAYLVGMYLLGRWLYGSPGPALILALLMSVTVWVGWGTFWGVTHSDPV PRTFFAALWPFMLMGAVVAMRHALWRPVAMLAAGLGMWVHGLGALNTGAMFFVAFFFCRPAGWSWTKHLGNLVLCLVFFF VPVLTFLWPSLGQKQAFSPADIQMFYDLFSQRWAKDYGRFAERLALFLSWGKPTFWILLAGFASWLVVRRNGSPRLRQLA AMCPAFVLALALVSTFSWLESLLAPPMGRLPMAHEFVRGLRYLIPLAWIMLVGVLALFWPRMAAWLRVGLCVLAVLLMLL CNGDRQNVAALYSIAEHTGLPMPYMSRAERASGEAKKHHEALVALREATMPNDVVFSNAGDMGVRHIANRGMGHAFKDGA HSYYNKNPGQARQWLANEKLRLKSPAGYVDVWLKSGLPWLFCDRPEDRAMLEKYGNVVWENSGWLIVRRHEGGTPAGGDS ASAVSGEKNAPTEGLLQEGQTPDQTPGVAVPAP >Mature_593_residues MRKYMLSNSVGSRVRVKAVDVLFVVLAACYALLVASGIVPLSGHGANLDSDLSVYAYSMVRADNPQYFQADEILREPTPA NSLWNLQQFVAELLTPGDQYAVGLLWAGAFIIFAYLVGMYLLGRWLYGSPGPALILALLMSVTVWVGWGTFWGVTHSDPV PRTFFAALWPFMLMGAVVAMRHALWRPVAMLAAGLGMWVHGLGALNTGAMFFVAFFFCRPAGWSWTKHLGNLVLCLVFFF VPVLTFLWPSLGQKQAFSPADIQMFYDLFSQRWAKDYGRFAERLALFLSWGKPTFWILLAGFASWLVVRRNGSPRLRQLA AMCPAFVLALALVSTFSWLESLLAPPMGRLPMAHEFVRGLRYLIPLAWIMLVGVLALFWPRMAAWLRVGLCVLAVLLMLL CNGDRQNVAALYSIAEHTGLPMPYMSRAERASGEAKKHHEALVALREATMPNDVVFSNAGDMGVRHIANRGMGHAFKDGA HSYYNKNPGQARQWLANEKLRLKSPAGYVDVWLKSGLPWLFCDRPEDRAMLEKYGNVVWENSGWLIVRRHEGGTPAGGDS ASAVSGEKNAPTEGLLQEGQTPDQTPGVAVPAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65634; Mature: 65634
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKYMLSNSVGSRVRVKAVDVLFVVLAACYALLVASGIVPLSGHGANLDSDLSVYAYSMV CCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHH RADNPQYFQADEILREPTPANSLWNLQQFVAELLTPGDQYAVGLLWAGAFIIFAYLVGMY HCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH LLGRWLYGSPGPALILALLMSVTVWVGWGTFWGVTHSDPVPRTFFAALWPFMLMGAVVAM HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH RHALWRPVAMLAAGLGMWVHGLGALNTGAMFFVAFFFCRPAGWSWTKHLGNLVLCLVFFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VPVLTFLWPSLGQKQAFSPADIQMFYDLFSQRWAKDYGRFAERLALFLSWGKPTFWILLA HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH GFASWLVVRRNGSPRLRQLAAMCPAFVLALALVSTFSWLESLLAPPMGRLPMAHEFVRGL HHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH RYLIPLAWIMLVGVLALFWPRMAAWLRVGLCVLAVLLMLLCNGDRQNVAALYSIAEHTGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC PMPYMSRAERASGEAKKHHEALVALREATMPNDVVFSNAGDMGVRHIANRGMGHAFKDGA CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHCCCCCHHHCCH HSYYNKNPGQARQWLANEKLRLKSPAGYVDVWLKSGLPWLFCDRPEDRAMLEKYGNVVWE HHHCCCCCHHHHHHHHCCCEEECCCCCHHHHHHHCCCCEEEECCCCHHHHHHHHCCEEEE NSGWLIVRRHEGGTPAGGDSASAVSGEKNAPTEGLLQEGQTPDQTPGVAVPAP CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MRKYMLSNSVGSRVRVKAVDVLFVVLAACYALLVASGIVPLSGHGANLDSDLSVYAYSMV CCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHH RADNPQYFQADEILREPTPANSLWNLQQFVAELLTPGDQYAVGLLWAGAFIIFAYLVGMY HCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH LLGRWLYGSPGPALILALLMSVTVWVGWGTFWGVTHSDPVPRTFFAALWPFMLMGAVVAM HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH RHALWRPVAMLAAGLGMWVHGLGALNTGAMFFVAFFFCRPAGWSWTKHLGNLVLCLVFFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VPVLTFLWPSLGQKQAFSPADIQMFYDLFSQRWAKDYGRFAERLALFLSWGKPTFWILLA HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH GFASWLVVRRNGSPRLRQLAAMCPAFVLALALVSTFSWLESLLAPPMGRLPMAHEFVRGL HHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH RYLIPLAWIMLVGVLALFWPRMAAWLRVGLCVLAVLLMLLCNGDRQNVAALYSIAEHTGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC PMPYMSRAERASGEAKKHHEALVALREATMPNDVVFSNAGDMGVRHIANRGMGHAFKDGA CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHCCCCCHHHCCH HSYYNKNPGQARQWLANEKLRLKSPAGYVDVWLKSGLPWLFCDRPEDRAMLEKYGNVVWE HHHCCCCCHHHHHHHHCCCEEECCCCCHHHHHHHCCCCEEEECCCCHHHHHHHHCCEEEE NSGWLIVRRHEGGTPAGGDSASAVSGEKNAPTEGLLQEGQTPDQTPGVAVPAP CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA