Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is coaX
Identifier: 220905479
GI number: 220905479
Start: 2673814
End: 2674605
Strand: Reverse
Name: coaX
Synonym: Ddes_2217
Alternate gene names: 220905479
Gene position: 2674605-2673814 (Counterclockwise)
Preceding gene: 220905480
Following gene: 220905478
Centisome position: 93.08
GC content: 63.26
Gene sequence:
>792_bases ATGCAGCCCGAACTTCTGCTTTTTGATATCGGCAATACTTCCATCAAAATCGGACTGGCGCATGAGCGGCAGGTGGTCAC TTCCTACACATTGCGCACCGATGCGGGGCAGACGGCGGATGACCTGGGGCTGAAGCTTGCGACCCTGCTCGGGCACGCGG GCGTTACGCCGCAGAGCCTGCGGGCCTGCGTGGCTTCTTCGGTGGTTCCGGGCTTTGATCCGCTGTTGCGCGAGGCAGTG GCCCGCTATGTGGACTGCCCCCTGTATCGCGTTGGCGCTGATTTGTCCGTGCCGCTTGAAAACCGCTATGAGCGCCCGGC CGAGGTCGGGGCCGACAGGCTGGTGGGAGCCTACGCGGCCCGCCGTCTGTATCCGGAATTTCCCGGCCTGCTGGTGGTTG ATTTCGGCACGGCGGTGACCATTGACTGTGTTAACGGCAACGCCTATATGGGCGGCCTGATTTTTCCCGGCCCGCGTACA GCGTTAAGCGCCCTTTCGCGTGAGGCGGCCAAGCTGCCCAGGGTCAACCTGGACGTACGGGCCGATGAACCGACCCCGGG GCGCAGTACGGCCACCAGCATACAGCACGGGCTGGTTTTCGGTTTTGCCTGCATGGTTGAAGGGCTTGCGCAGCGCCTCA AGCGGCAGTTGCCCGGTCCTGCCAGGGTGCTGGGAACCGGAGGTTTTGCGGCGTCCATCGCCAGGGTAAGTCCGGTCTTC GACCATGTGTTGCCCGCCTTGCTGCTTGAGGGTTTACGCCGCCTGTACTATGAAGAGCGCACGGCGTTCTGA
Upstream 100 bases:
>100_bases GCGTATGTCCGGGCCATGCCATGTCCGGGCGCTTGCCTGGAGCGGCCCGATTGAGCATAATCAGCGGGTTGAAACCTTCA GCTCCATGTGGAGGACTCCC
Downstream 100 bases:
>100_bases TATGCTGCGGGCGTGTACGGCCTGTTGTTTCCGGTTTTGTCCGGCGTGCGGCGGCATTGCGCAAAGGCAACCTGTGCGCA TCGGTGCATGGAGCGGTCTT
Product: pantothenate kinase
Products: NA
Alternate protein names: PanK-III; Pantothenic acid kinase
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MQPELLLFDIGNTSIKIGLAHERQVVTSYTLRTDAGQTADDLGLKLATLLGHAGVTPQSLRACVASSVVPGFDPLLREAV ARYVDCPLYRVGADLSVPLENRYERPAEVGADRLVGAYAARRLYPEFPGLLVVDFGTAVTIDCVNGNAYMGGLIFPGPRT ALSALSREAAKLPRVNLDVRADEPTPGRSTATSIQHGLVFGFACMVEGLAQRLKRQLPGPARVLGTGGFAASIARVSPVF DHVLPALLLEGLRRLYYEERTAF
Sequences:
>Translated_263_residues MQPELLLFDIGNTSIKIGLAHERQVVTSYTLRTDAGQTADDLGLKLATLLGHAGVTPQSLRACVASSVVPGFDPLLREAV ARYVDCPLYRVGADLSVPLENRYERPAEVGADRLVGAYAARRLYPEFPGLLVVDFGTAVTIDCVNGNAYMGGLIFPGPRT ALSALSREAAKLPRVNLDVRADEPTPGRSTATSIQHGLVFGFACMVEGLAQRLKRQLPGPARVLGTGGFAASIARVSPVF DHVLPALLLEGLRRLYYEERTAF >Mature_263_residues MQPELLLFDIGNTSIKIGLAHERQVVTSYTLRTDAGQTADDLGLKLATLLGHAGVTPQSLRACVASSVVPGFDPLLREAV ARYVDCPLYRVGADLSVPLENRYERPAEVGADRLVGAYAARRLYPEFPGLLVVDFGTAVTIDCVNGNAYMGGLIFPGPRT ALSALSREAAKLPRVNLDVRADEPTPGRSTATSIQHGLVFGFACMVEGLAQRLKRQLPGPARVLGTGGFAASIARVSPVF DHVLPALLLEGLRRLYYEERTAF
Specific function: Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
COG id: COG1521
COG function: function code K; Putative transcriptional regulator, homolog of Bvg accessory factor
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type III pantothenate kinase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAX_DESDA (B8J468)
Other databases:
- EMBL: CP001358 - RefSeq: YP_002480791.1 - GeneID: 7285933 - GenomeReviews: CP001358_GR - KEGG: dds:Ddes_2217 - HOGENOM: HBG634537 - ProtClustDB: PRK13321 - GO: GO:0005737 - HAMAP: MF_01274 - InterPro: IPR004619 - TIGRFAMs: TIGR00671
Pfam domain/function: PF03309 Bvg_acc_factor
EC number: =2.7.1.33
Molecular weight: Translated: 28245; Mature: 28245
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: ACT_SITE 112-112 BINDING 103-103 BINDING 137-137 BINDING 190-190
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPELLLFDIGNTSIKIGLAHERQVVTSYTLRTDAGQTADDLGLKLATLLGHAGVTPQSL CCCCEEEEECCCCEEEEEECCCHHHHHHEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHH RACVASSVVPGFDPLLREAVARYVDCPLYRVGADLSVPLENRYERPAEVGADRLVGAYAA HHHHHHHCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCHHHCCCCCHHHHHHHHHHHHHH RRLYPEFPGLLVVDFGTAVTIDCVNGNAYMGGLIFPGPRTALSALSREAAKLPRVNLDVR HHHCCCCCCEEEEECCCEEEEEEECCCEEECCEECCCHHHHHHHHHHHHHHCCCCCEEEE ADEPTPGRSTATSIQHGLVFGFACMVEGLAQRLKRQLPGPARVLGTGGFAASIARVSPVF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHH DHVLPALLLEGLRRLYYEERTAF HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQPELLLFDIGNTSIKIGLAHERQVVTSYTLRTDAGQTADDLGLKLATLLGHAGVTPQSL CCCCEEEEECCCCEEEEEECCCHHHHHHEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHH RACVASSVVPGFDPLLREAVARYVDCPLYRVGADLSVPLENRYERPAEVGADRLVGAYAA HHHHHHHCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCHHHCCCCCHHHHHHHHHHHHHH RRLYPEFPGLLVVDFGTAVTIDCVNGNAYMGGLIFPGPRTALSALSREAAKLPRVNLDVR HHHCCCCCCEEEEECCCEEEEEEECCCEEECCEECCCHHHHHHHHHHHHHHCCCCCEEEE ADEPTPGRSTATSIQHGLVFGFACMVEGLAQRLKRQLPGPARVLGTGGFAASIARVSPVF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHH DHVLPALLLEGLRRLYYEERTAF HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA