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The map label for this gene is yfdH [H]

Identifier: 220905481

GI number: 220905481

Start: 2676637

End: 2677620

Strand: Reverse

Name: yfdH [H]

Synonym: Ddes_2219

Alternate gene names: 220905481

Gene position: 2677620-2676637 (Counterclockwise)

Preceding gene: 220905482

Following gene: 220905480

Centisome position: 93.19

GC content: 52.24

Gene sequence:

>984_bases
ATGTCCAGTGCAGAGATAGTGCAGTCTCCCAGGGGGGCTATCAGCCTGTCATTGGTGGTTCCAGTGTACAACGAGGCTGA
TGTCATTGACATTTTTGTCAATAAGATTAATGAAGTGTTCAAAACACGTACTGATATTGACCTAGAGATGGTTTTTGTTG
ACGATGGCAGTACCGACGGTACCGCCGCCGTTTTGGAATGTCTTTGCCATGATGACCCACGCGTGCGTGTCTTAGAGTTG
TCGCGGAATTTCGGTAAGGAAGCGGCCCTGACGGCTGGACTCGATTTTGCTGCAGGTCAGGCTGTTGTGCCTATGGACGT
TGACCTGCAGGACCCGCCGGAATTGATACTCGACATGGTCGAAAAATGGCAGGAAGGGTTTGATGTGGTGCTTGGGCGAC
GGGCCAACAGAAGTTCGGACACCTGGGCCAAGCGTACGTCAGCGTATCTGTTTTACAGCCTGCATAACAAGATTGCCAAA
CCCAAACTACCGGTCAACGTGGGGGATTTTCGCCTCATGGACCGTCGCGTAGTGGAGGCGTTGCGGCTTTTGCCCGAGTC
AAGACGCTTCATGAAGGGCCTTTTTGCGTGGCTGGGCTTTCGCACGTGCAATCTGGACTATGTACGTCCGGCCCGCGCGG
CAGGGCAGACAAAGTTCAACAGCTGGCGTCTCTGGAATTTTGCACTTGAGGGCCTCACCAGCTTCAGCACTGCCCCGTTA
CGCATATGGACCTATGTGGGCATGGCAATTTCGGCATTATCGTTCATCTATGCCACGATAATTGCCTTGAAGGTTATCCT
TGGCGGCGTTGATGTTCCCGGCTATGCATCTCTTATGGTTGCCATAACCTTTTTGGGTGGTTTGCAGCTTATCGGCATCG
GCATGATTGGCGAATACCTCGGGCGCGCCTATATGGAGTCAAAACGGCGGCCAGTATATATTGTAAGACGAATATACGCA
AAAAATGCTCGGCCCGATGAGTAG

Upstream 100 bases:

>100_bases
AACAACGTGTTGACACTCTACATCTAGGGCAGCATGGCGCATGGACGTTTGTGGTATGTGCTCTTGCCATTTCTGTTATA
AATGAGAGAGGAATATCTCG

Downstream 100 bases:

>100_bases
AGTATGCTATTTCACTGGAAACATGGATGAGAAAATATATGCTGTCCAATAGTGTCGGAAGCCGCGTACGCGTCAAGGCT
GTAGATGTTCTGTTTGTTGT

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MSSAEIVQSPRGAISLSLVVPVYNEADVIDIFVNKINEVFKTRTDIDLEMVFVDDGSTDGTAAVLECLCHDDPRVRVLEL
SRNFGKEAALTAGLDFAAGQAVVPMDVDLQDPPELILDMVEKWQEGFDVVLGRRANRSSDTWAKRTSAYLFYSLHNKIAK
PKLPVNVGDFRLMDRRVVEALRLLPESRRFMKGLFAWLGFRTCNLDYVRPARAAGQTKFNSWRLWNFALEGLTSFSTAPL
RIWTYVGMAISALSFIYATIIALKVILGGVDVPGYASLMVAITFLGGLQLIGIGMIGEYLGRAYMESKRRPVYIVRRIYA
KNARPDE

Sequences:

>Translated_327_residues
MSSAEIVQSPRGAISLSLVVPVYNEADVIDIFVNKINEVFKTRTDIDLEMVFVDDGSTDGTAAVLECLCHDDPRVRVLEL
SRNFGKEAALTAGLDFAAGQAVVPMDVDLQDPPELILDMVEKWQEGFDVVLGRRANRSSDTWAKRTSAYLFYSLHNKIAK
PKLPVNVGDFRLMDRRVVEALRLLPESRRFMKGLFAWLGFRTCNLDYVRPARAAGQTKFNSWRLWNFALEGLTSFSTAPL
RIWTYVGMAISALSFIYATIIALKVILGGVDVPGYASLMVAITFLGGLQLIGIGMIGEYLGRAYMESKRRPVYIVRRIYA
KNARPDE
>Mature_326_residues
SSAEIVQSPRGAISLSLVVPVYNEADVIDIFVNKINEVFKTRTDIDLEMVFVDDGSTDGTAAVLECLCHDDPRVRVLELS
RNFGKEAALTAGLDFAAGQAVVPMDVDLQDPPELILDMVEKWQEGFDVVLGRRANRSSDTWAKRTSAYLFYSLHNKIAKP
KLPVNVGDFRLMDRRVVEALRLLPESRRFMKGLFAWLGFRTCNLDYVRPARAAGQTKFNSWRLWNFALEGLTSFSTAPLR
IWTYVGMAISALSFIYATIIALKVILGGVDVPGYASLMVAITFLGGLQLIGIGMIGEYLGRAYMESKRRPVYIVRRIYAK
NARPDE

Specific function: Involved in O antigen modification. Catalyzes the transfer of the glucose residue from UDP-glucose to a lipid carrier [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=182, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI1788692, Length=305, Percent_Identity=53.4426229508197, Blast_Score=350, Evalue=5e-98,
Organism=Escherichia coli, GI1788588, Length=323, Percent_Identity=29.7213622291022, Blast_Score=149, Evalue=3e-37,
Organism=Saccharomyces cerevisiae, GI6325441, Length=113, Percent_Identity=30.9734513274336, Blast_Score=66, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 36558; Mature: 36427

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSAEIVQSPRGAISLSLVVPVYNEADVIDIFVNKINEVFKTRTDIDLEMVFVDDGSTDG
CCCHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCH
TAAVLECLCHDDPRVRVLELSRNFGKEAALTAGLDFAAGQAVVPMDVDLQDPPELILDMV
HHHHHHHHHCCCCCEEEEEEHHCCCCHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHH
EKWQEGFDVVLGRRANRSSDTWAKRTSAYLFYSLHNKIAKPKLPVNVGDFRLMDRRVVEA
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHH
LRLLPESRRFMKGLFAWLGFRTCNLDYVRPARAAGQTKFNSWRLWNFALEGLTSFSTAPL
HHHCHHHHHHHHHHHHHHHHEECCCCCCCCHHHCCCCCCCCEEHHHHHHHHHHCCCCCHH
RIWTYVGMAISALSFIYATIIALKVILGGVDVPGYASLMVAITFLGGLQLIGIGMIGEYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRAYMESKRRPVYIVRRIYAKNARPDE
HHHHHHCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SSAEIVQSPRGAISLSLVVPVYNEADVIDIFVNKINEVFKTRTDIDLEMVFVDDGSTDG
CCHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCH
TAAVLECLCHDDPRVRVLELSRNFGKEAALTAGLDFAAGQAVVPMDVDLQDPPELILDMV
HHHHHHHHHCCCCCEEEEEEHHCCCCHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHH
EKWQEGFDVVLGRRANRSSDTWAKRTSAYLFYSLHNKIAKPKLPVNVGDFRLMDRRVVEA
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHH
LRLLPESRRFMKGLFAWLGFRTCNLDYVRPARAAGQTKFNSWRLWNFALEGLTSFSTAPL
HHHCHHHHHHHHHHHHHHHHEECCCCCCCCHHHCCCCCCCCEEHHHHHHHHHHCCCCCHH
RIWTYVGMAISALSFIYATIIALKVILGGVDVPGYASLMVAITFLGGLQLIGIGMIGEYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRAYMESKRRPVYIVRRIYAKNARPDE
HHHHHHCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]