Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is 220905281
Identifier: 220905281
GI number: 220905281
Start: 2431551
End: 2432105
Strand: Reverse
Name: 220905281
Synonym: Ddes_2019
Alternate gene names: NA
Gene position: 2432105-2431551 (Counterclockwise)
Preceding gene: 220905282
Following gene: 220905280
Centisome position: 84.64
GC content: 56.58
Gene sequence:
>555_bases ATGCTCAACCCCAACCAATGTGTGCTTTACAGCGGCGGCGCCGCCGGTACAGAACAGTTCTTCGGCGCTCTGGCTGAAAG CTGGGGCATGGAGGAAGTGAATTACAGTTTTGAGGGGCATCAGATGGAGCGCACCCGTGGGGTGCGTGTTCTTACGTCTG AAGAGCTGGCCCTTAAAGATGTGAGTCTTACTTATGTGTCGCGCCTCATGAGCCGTGAGTACACGCGCGCCCCCCTGTTT CGCAAGGTGCTGCAGTCCATCTGCTGGCAGGTCAGCAGTGGCGACCAGATCATAGTGGTCGGAGCCATCCAGCCCGACGG CACGGTCAAGGGCGGCACGGGCTGGGGGGCGGAATTCGCCAAAATATGCAACAAACCCCTGCTGGTTTTTGATCAGGCTA AAAACGCCTGGTTTGACTGGCGTAAAGATAAATGGGTGCAGGTGGAAAATCCCGCCATTGAGCAGGCCCATTTTGCTGCG ACGGGTACGCGCTTTCTTGAAGATAACGGCCGCGTAGCCATTCAGAATCTGTTTGCCCGTTCGTTTACGCGCTGA
Upstream 100 bases:
>100_bases CGAGCGCTGTAATTTTTGCAATGATGACCATGACGCTTCTGCCGGATACACAGACCACTATCCACAACTTGCCCGGCGCA ACAATCCTTGAGGAGGCAGC
Downstream 100 bases:
>100_bases TAATGCGGTTTTTTATCCCGGCCCGGGGCGTTCCCCGGGCCGGGCTTCCGGCCTGCGCCATGCCTTGGGGCATGGCCGCT TGCCGCGTGCTGTTGCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MLNPNQCVLYSGGAAGTEQFFGALAESWGMEEVNYSFEGHQMERTRGVRVLTSEELALKDVSLTYVSRLMSREYTRAPLF RKVLQSICWQVSSGDQIIVVGAIQPDGTVKGGTGWGAEFAKICNKPLLVFDQAKNAWFDWRKDKWVQVENPAIEQAHFAA TGTRFLEDNGRVAIQNLFARSFTR
Sequences:
>Translated_184_residues MLNPNQCVLYSGGAAGTEQFFGALAESWGMEEVNYSFEGHQMERTRGVRVLTSEELALKDVSLTYVSRLMSREYTRAPLF RKVLQSICWQVSSGDQIIVVGAIQPDGTVKGGTGWGAEFAKICNKPLLVFDQAKNAWFDWRKDKWVQVENPAIEQAHFAA TGTRFLEDNGRVAIQNLFARSFTR >Mature_184_residues MLNPNQCVLYSGGAAGTEQFFGALAESWGMEEVNYSFEGHQMERTRGVRVLTSEELALKDVSLTYVSRLMSREYTRAPLF RKVLQSICWQVSSGDQIIVVGAIQPDGTVKGGTGWGAEFAKICNKPLLVFDQAKNAWFDWRKDKWVQVENPAIEQAHFAA TGTRFLEDNGRVAIQNLFARSFTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20661; Mature: 20661
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNPNQCVLYSGGAAGTEQFFGALAESWGMEEVNYSFEGHQMERTRGVRVLTSEELALKD CCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEHHHCCEEEEECCCHHHHH VSLTYVSRLMSREYTRAPLFRKVLQSICWQVSSGDQIIVVGAIQPDGTVKGGTGWGAEFA HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEECCCCCCHHHH KICNKPLLVFDQAKNAWFDWRKDKWVQVENPAIEQAHFAATGTRFLEDNGRVAIQNLFAR HHCCCCEEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCEEECCCCCCHHHHHHHH SFTR HCCC >Mature Secondary Structure MLNPNQCVLYSGGAAGTEQFFGALAESWGMEEVNYSFEGHQMERTRGVRVLTSEELALKD CCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEHHHCCEEEEECCCHHHHH VSLTYVSRLMSREYTRAPLFRKVLQSICWQVSSGDQIIVVGAIQPDGTVKGGTGWGAEFA HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEECCCCCCHHHH KICNKPLLVFDQAKNAWFDWRKDKWVQVENPAIEQAHFAATGTRFLEDNGRVAIQNLFAR HHCCCCEEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCEEECCCCCCHHHHHHHH SFTR HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA