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The map label for this gene is nirH [H]

Identifier: 220905280

GI number: 220905280

Start: 2430942

End: 2431421

Strand: Reverse

Name: nirH [H]

Synonym: Ddes_2018

Alternate gene names: 220905280

Gene position: 2431421-2430942 (Counterclockwise)

Preceding gene: 220905281

Following gene: 220905279

Centisome position: 84.62

GC content: 59.79

Gene sequence:

>480_bases
ATGAGCCATCAATTCAGCCCAGAGGAACAAGCCGTTCTGCGCATTGTGCAGGCCAACCTGCCCGACAGCCTGACCCCCTA
TGCCGATCTGGCAGAGCAGGCGGGCATGACAGAAGCGCAGGTGCTTGAACTGCTTGGCCGCCTCAAGGCGTCCGGGGCCA
TCCGTCGCTTCGGGGCGAGCATCAAGCACCAGAAAACAGGTTGGACCCACAACGCCATGGTCGCGTGGAAGGTCACGCCC
GACCAGGTGGACGATTGCGGCCGCAAGGCGGCAGAGCACAGCCATATTTCGCACGTCTATTATCGCCCCAGCTCCGCCCC
TGACTGGCCCTACGAGATGTACACCATGATACACGGCCGCAGCGAGGCTGAATGCCTGGGCGTTGTTGAGGACGTCAAGC
GCACGACTTCCCTGAAAGAGCACGCCATCCTGCGCAGCCTCAAGGAACTGAAAAAAACTTCCATGACGTATTTTACCTAG

Upstream 100 bases:

>100_bases
GTTCCCCGGGCCGGGCTTCCGGCCTGCGCCATGCCTTGGGGCATGGCCGCTTGCCGCGTGCTGTTGCCCGCGGCATCTTC
TTTGTCTATTCGGAGAACCC

Downstream 100 bases:

>100_bases
CATTTTGTTGCTGAAAATATTCATCAAAAATGAAATAGCGCCCCTGTTCACAGCGCGACGGCATTTACGGCCCGCGTAGG
CGGGCAACATTGGCCGCCAC

Product: putative AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MSHQFSPEEQAVLRIVQANLPDSLTPYADLAEQAGMTEAQVLELLGRLKASGAIRRFGASIKHQKTGWTHNAMVAWKVTP
DQVDDCGRKAAEHSHISHVYYRPSSAPDWPYEMYTMIHGRSEAECLGVVEDVKRTTSLKEHAILRSLKELKKTSMTYFT

Sequences:

>Translated_159_residues
MSHQFSPEEQAVLRIVQANLPDSLTPYADLAEQAGMTEAQVLELLGRLKASGAIRRFGASIKHQKTGWTHNAMVAWKVTP
DQVDDCGRKAAEHSHISHVYYRPSSAPDWPYEMYTMIHGRSEAECLGVVEDVKRTTSLKEHAILRSLKELKKTSMTYFT
>Mature_158_residues
SHQFSPEEQAVLRIVQANLPDSLTPYADLAEQAGMTEAQVLELLGRLKASGAIRRFGASIKHQKTGWTHNAMVAWKVTPD
QVDDCGRKAAEHSHISHVYYRPSSAPDWPYEMYTMIHGRSEAECLGVVEDVKRTTSLKEHAILRSLKELKKTSMTYFT

Specific function: Unknown

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011991 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17915; Mature: 17783

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHQFSPEEQAVLRIVQANLPDSLTPYADLAEQAGMTEAQVLELLGRLKASGAIRRFGAS
CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCH
IKHQKTGWTHNAMVAWKVTPDQVDDCGRKAAEHSHISHVYYRPSSAPDWPYEMYTMIHGR
HCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHCCC
SEAECLGVVEDVKRTTSLKEHAILRSLKELKKTSMTYFT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SHQFSPEEQAVLRIVQANLPDSLTPYADLAEQAGMTEAQVLELLGRLKASGAIRRFGAS
CCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCH
IKHQKTGWTHNAMVAWKVTPDQVDDCGRKAAEHSHISHVYYRPSSAPDWPYEMYTMIHGR
HCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHCCC
SEAECLGVVEDVKRTTSLKEHAILRSLKELKKTSMTYFT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8982003; 10984043 [H]