Click here to switch to the map view.

The map label for this gene is 220904346

Identifier: 220904346

GI number: 220904346

Start: 1260276

End: 1261358

Strand: Reverse

Name: 220904346

Synonym: Ddes_1074

Alternate gene names: NA

Gene position: 1261358-1260276 (Counterclockwise)

Preceding gene: 220904347

Following gene: 220904334

Centisome position: 43.9

GC content: 51.34

Gene sequence:

>1083_bases
ATGCCTGTATTCATCATACTTTTGGCCTTGGCTCCCGCTGTAAGCGCGGCCGGCCTGCTTATGCCTTTTCCAATATCATA
CATGGCGGGCGGCGCGGGCCTGCTCTGCGGCTTCAGCGGGCTTTATTTTCTTTACCAGGACCTGCTCAAGCCCATGAAAA
ACATTTCCCACAGTCTCCAGCAGCCCGGGGCGCTCCACCTGTCCCACGATACGGACTGTGGCATCCTGCGCGAACTGGCG
GACCTTATGACCGTTCACGGTGAAGATCGCTCACGTACGCTGGCTGCAAACTTGCGCGATCTCGAAAAATTTCAGCATGA
ATCCGCTGAATGGCGCGAAAAATACAAAATCGCCATGACCGGTCAAATCATGATCAGAGACAGCCTGCACGAAGTGGTGG
GCAAGATGCATAAACTTTCTTCTGATCAGGCCGAACAGATCAGAAAATTGCTTGAAGTGCATCCGGAACTGGCGCAGGAA
TCGCTTTTTAACGGTTTTACAGTGCAGTGGCTGGACAAGATTATTGCCGAACTCGAGTATTGCGAAAGCTACGTGGAACA
GATGACCGCATTTCTGGGCGATCCGGAAACAGACCCGGTTACCAACCAGGTGGAACAGCAAGAAGAGTATGTTCAATGGT
CGGACGATTTTTCCACTGGCGTTCCTGTTATTGACGGACAGCACAAGCTGCTGCTTTCATACATTAACAAATTGCATCGG
GGCATCATGCAGGCCGAGGCTTCTGATCTCTTGCTGGAAATACTTGATGCCTTGGCCGGCTACGCCTTTACCCACTTCAA
TACGGAAGAAATTTTCTTCGCCCACTCCGATTACCCGGCGGCAAAGGCACATATTGAAATACACCAGCAGTTCAGGGATA
AGGTTCTTCTTTTCCGCGAATCCGTGCTTGAAGGCAAATCAGGTGTGGACCTTGCCCTGCTGGACTTTCTGAAGACCTGG
CTTGTGGAGCATATTCAGGGTATGGACGTTTCTTTCGCTCCCTATGTGGCCCCGAAGCATGGCGCGAAAAAACCTGATGA
AGAAGACGCTGCGACCAACACAGAAGCAACACAGGCCATTTAA

Upstream 100 bases:

>100_bases
GCCGCCCGGCAGGCCCTGTACTTCCAGCACAGTCACCTGGCCGGAGCCTGCGGGTTCAGCCCACGGCAAAGGCCATACCC
ATAATATATAAGGATATCGT

Downstream 100 bases:

>100_bases
AGAGCATCCCTGACATCGGACCGCGTAAAGAGAAGAGCCTCCGCTTTTTGAGCGGAGGCTCTTCTCTCTACAACACATTT
TGCTCTTGAAAATTATATTT

Product: hemerythrin-like metal-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MPVFIILLALAPAVSAAGLLMPFPISYMAGGAGLLCGFSGLYFLYQDLLKPMKNISHSLQQPGALHLSHDTDCGILRELA
DLMTVHGEDRSRTLAANLRDLEKFQHESAEWREKYKIAMTGQIMIRDSLHEVVGKMHKLSSDQAEQIRKLLEVHPELAQE
SLFNGFTVQWLDKIIAELEYCESYVEQMTAFLGDPETDPVTNQVEQQEEYVQWSDDFSTGVPVIDGQHKLLLSYINKLHR
GIMQAEASDLLLEILDALAGYAFTHFNTEEIFFAHSDYPAAKAHIEIHQQFRDKVLLFRESVLEGKSGVDLALLDFLKTW
LVEHIQGMDVSFAPYVAPKHGAKKPDEEDAATNTEATQAI

Sequences:

>Translated_360_residues
MPVFIILLALAPAVSAAGLLMPFPISYMAGGAGLLCGFSGLYFLYQDLLKPMKNISHSLQQPGALHLSHDTDCGILRELA
DLMTVHGEDRSRTLAANLRDLEKFQHESAEWREKYKIAMTGQIMIRDSLHEVVGKMHKLSSDQAEQIRKLLEVHPELAQE
SLFNGFTVQWLDKIIAELEYCESYVEQMTAFLGDPETDPVTNQVEQQEEYVQWSDDFSTGVPVIDGQHKLLLSYINKLHR
GIMQAEASDLLLEILDALAGYAFTHFNTEEIFFAHSDYPAAKAHIEIHQQFRDKVLLFRESVLEGKSGVDLALLDFLKTW
LVEHIQGMDVSFAPYVAPKHGAKKPDEEDAATNTEATQAI
>Mature_359_residues
PVFIILLALAPAVSAAGLLMPFPISYMAGGAGLLCGFSGLYFLYQDLLKPMKNISHSLQQPGALHLSHDTDCGILRELAD
LMTVHGEDRSRTLAANLRDLEKFQHESAEWREKYKIAMTGQIMIRDSLHEVVGKMHKLSSDQAEQIRKLLEVHPELAQES
LFNGFTVQWLDKIIAELEYCESYVEQMTAFLGDPETDPVTNQVEQQEEYVQWSDDFSTGVPVIDGQHKLLLSYINKLHRG
IMQAEASDLLLEILDALAGYAFTHFNTEEIFFAHSDYPAAKAHIEIHQQFRDKVLLFRESVLEGKSGVDLALLDFLKTWL
VEHIQGMDVSFAPYVAPKHGAKKPDEEDAATNTEATQAI

Specific function: Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms [H]

COG id: COG2703

COG function: function code P; Hemerythrin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hemerythrin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012827
- InterPro:   IPR012312
- InterPro:   IPR016131 [H]

Pfam domain/function: PF01814 Hemerythrin [H]

EC number: NA

Molecular weight: Translated: 40430; Mature: 40298

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS00550 HEMERYTHRINS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVFIILLALAPAVSAAGLLMPFPISYMAGGAGLLCGFSGLYFLYQDLLKPMKNISHSLQ
CHHHHHHHHHHHHHHHCCHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QPGALHLSHDTDCGILRELADLMTVHGEDRSRTLAANLRDLEKFQHESAEWREKYKIAMT
CCCCEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
GQIMIRDSLHEVVGKMHKLSSDQAEQIRKLLEVHPELAQESLFNGFTVQWLDKIIAELEY
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHH
CESYVEQMTAFLGDPETDPVTNQVEQQEEYVQWSDDFSTGVPVIDGQHKLLLSYINKLHR
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHH
GIMQAEASDLLLEILDALAGYAFTHFNTEEIFFAHSDYPAAKAHIEIHQQFRDKVLLFRE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
SVLEGKSGVDLALLDFLKTWLVEHIQGMDVSFAPYVAPKHGAKKPDEEDAATNTEATQAI
HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHCC
>Mature Secondary Structure 
PVFIILLALAPAVSAAGLLMPFPISYMAGGAGLLCGFSGLYFLYQDLLKPMKNISHSLQ
HHHHHHHHHHHHHHHCCHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QPGALHLSHDTDCGILRELADLMTVHGEDRSRTLAANLRDLEKFQHESAEWREKYKIAMT
CCCCEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
GQIMIRDSLHEVVGKMHKLSSDQAEQIRKLLEVHPELAQESLFNGFTVQWLDKIIAELEY
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHH
CESYVEQMTAFLGDPETDPVTNQVEQQEEYVQWSDDFSTGVPVIDGQHKLLLSYINKLHR
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHH
GIMQAEASDLLLEILDALAGYAFTHFNTEEIFFAHSDYPAAKAHIEIHQQFRDKVLLFRE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
SVLEGKSGVDLALLDFLKTWLVEHIQGMDVSFAPYVAPKHGAKKPDEEDAATNTEATQAI
HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA