| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904334
Identifier: 220904334
GI number: 220904334
Start: 1243770
End: 1245011
Strand: Reverse
Name: 220904334
Synonym: Ddes_1061
Alternate gene names: NA
Gene position: 1245011-1243770 (Counterclockwise)
Preceding gene: 220904346
Following gene: 220904333
Centisome position: 43.33
GC content: 55.72
Gene sequence:
>1242_bases ATGGCAGATATTCGCAAAAGCTTGCTTCAACTCATTTTTTCAGGTGCGTACCTTCTGCGCTGGAACGACAAATTGCGCCC GGCGGAACTGCTTGAAACCGACAAGCAGGCGCACAAGATGCTGCTAGCCTGTGTGCTGTGGCATGAAAACTCGCTCCACA TGTCTGAAGAAAAAAAAGTGCGCCTTGCGGGCGACATTATTGAAGGCGGCCTTTTCGACTATTTCTACCGCCTGATCATA ACCGACATCAAACCGCCGATCTTTTACCGCATAAAAGAAAATCCCGAACAGTACCGTCAGTTGACAGACCATGTGCTGGA AAGCCTGCAGCCGGCGCTGTCGCCTCTTGGCCCCTTCTGGGAACGGATGTGCCGCTGGCACCATGCGCCGGATGATGGCA GCCTGCCCCGGCGCATACTCACGGCCGCGCACCTGTACGCCTCACAGTGGGAATTCAATCTTATCAAGCCCCTCAACAGC CATTTTGACGACGAAATGGACGATATCGGGCAATCCTTTGTGGACAGGCTGCATTCGTTCACCGACCTGAAGGGCCTGGA GCATATGCGTACCCAGGGTACAGCCCTGAACCGCCTGGCCAACCTCTGCGGGCAGCTGCGTTTTCAGATCCGCTGGACGC AGGCTCCGCGCATACCCGCAACGTCCGTACTGGGGCACATGTTTATTGTGGCCTGCTTCGCCTACTTTTTCAGCCTGTCG GTCAACGCCTGCCGCGCCAGAGCCAACAACAATTTTTTCTGCGGGCTTTTTCATGATCTGCCGGAAGTGCTCACCCGCGA CATCATCTCGCCGGTCAAGCGCTCTGTGGCTGACCTGCCAAAGATTATCAAGGAATATGAAGAAAAAGAGCTTGAACGCC GCGTTTTCGCTCCGTTGCGGCAACAGGGATTCACAGCGCTTGTAGAACGCATATCCTACTATCTCGGCCTGGGGGTTCAG TCCGAATTTCAGGAATGCGTACGGCGCCACGGCAGGATTGAAAAGGTTTCGGACTTCTGCACCCTGCAGGAAAACTGCAA CACCGACGCCCTTGACCCCAAGGATGGACGCCTTATCAAGGATTGCGACAACCTGGCCGCCTTTCTTGAGGCCCACAGCT CTATCCGTAACGGTGTTTCGTCCCCCCACCTGCTGGAAGCCCGAGTGCGCCTGCTCACCCTGCTGCGGCAAAGCCCGCTT GCATGTCTCAAGCTGGATTCTTTGCTGGCGGACTTTGACTAG
Upstream 100 bases:
>100_bases GTAAAAGCCGCAAAATACGGGGACGTCATGAAGCCCTTGAGCTTTACCCCATATCTTCCTATACTGCCAAGTGTTTTTCC GACAGGCCTCCGGAGAAAAT
Downstream 100 bases:
>100_bases ACCATTTAGCCTTCAAGAAGATATGCTCCAAGGCTTGCAAGACATGCGCTGCGGTGTTGGGCCGCGCCGGCAAACCGTAC AGGCTGGCTTACGCCTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: HAD Superfamily Hydrolase; Competence Protein ComGF; Metal-Dependent Phosphohydrolase HD Region; Metal Dependent Phosphohydrolase; Cytoplasmic HAD Superfamily Hydrolase
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MADIRKSLLQLIFSGAYLLRWNDKLRPAELLETDKQAHKMLLACVLWHENSLHMSEEKKVRLAGDIIEGGLFDYFYRLII TDIKPPIFYRIKENPEQYRQLTDHVLESLQPALSPLGPFWERMCRWHHAPDDGSLPRRILTAAHLYASQWEFNLIKPLNS HFDDEMDDIGQSFVDRLHSFTDLKGLEHMRTQGTALNRLANLCGQLRFQIRWTQAPRIPATSVLGHMFIVACFAYFFSLS VNACRARANNNFFCGLFHDLPEVLTRDIISPVKRSVADLPKIIKEYEEKELERRVFAPLRQQGFTALVERISYYLGLGVQ SEFQECVRRHGRIEKVSDFCTLQENCNTDALDPKDGRLIKDCDNLAAFLEAHSSIRNGVSSPHLLEARVRLLTLLRQSPL ACLKLDSLLADFD
Sequences:
>Translated_413_residues MADIRKSLLQLIFSGAYLLRWNDKLRPAELLETDKQAHKMLLACVLWHENSLHMSEEKKVRLAGDIIEGGLFDYFYRLII TDIKPPIFYRIKENPEQYRQLTDHVLESLQPALSPLGPFWERMCRWHHAPDDGSLPRRILTAAHLYASQWEFNLIKPLNS HFDDEMDDIGQSFVDRLHSFTDLKGLEHMRTQGTALNRLANLCGQLRFQIRWTQAPRIPATSVLGHMFIVACFAYFFSLS VNACRARANNNFFCGLFHDLPEVLTRDIISPVKRSVADLPKIIKEYEEKELERRVFAPLRQQGFTALVERISYYLGLGVQ SEFQECVRRHGRIEKVSDFCTLQENCNTDALDPKDGRLIKDCDNLAAFLEAHSSIRNGVSSPHLLEARVRLLTLLRQSPL ACLKLDSLLADFD >Mature_412_residues ADIRKSLLQLIFSGAYLLRWNDKLRPAELLETDKQAHKMLLACVLWHENSLHMSEEKKVRLAGDIIEGGLFDYFYRLIIT DIKPPIFYRIKENPEQYRQLTDHVLESLQPALSPLGPFWERMCRWHHAPDDGSLPRRILTAAHLYASQWEFNLIKPLNSH FDDEMDDIGQSFVDRLHSFTDLKGLEHMRTQGTALNRLANLCGQLRFQIRWTQAPRIPATSVLGHMFIVACFAYFFSLSV NACRARANNNFFCGLFHDLPEVLTRDIISPVKRSVADLPKIIKEYEEKELERRVFAPLRQQGFTALVERISYYLGLGVQS EFQECVRRHGRIEKVSDFCTLQENCNTDALDPKDGRLIKDCDNLAAFLEAHSSIRNGVSSPHLLEARVRLLTLLRQSPLA CLKLDSLLADFD
Specific function: Unknown
COG id: COG1896
COG function: function code R; Predicted hydrolases of HD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47639; Mature: 47508
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADIRKSLLQLIFSGAYLLRWNDKLRPAELLETDKQAHKMLLACVLWHENSLHMSEEKKV CCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH RLAGDIIEGGLFDYFYRLIITDIKPPIFYRIKENPEQYRQLTDHVLESLQPALSPLGPFW HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHH ERMCRWHHAPDDGSLPRRILTAAHLYASQWEFNLIKPLNSHFDDEMDDIGQSFVDRLHSF HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH TDLKGLEHMRTQGTALNRLANLCGQLRFQIRWTQAPRIPATSVLGHMFIVACFAYFFSLS HHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH VNACRARANNNFFCGLFHDLPEVLTRDIISPVKRSVADLPKIIKEYEEKELERRVFAPLR HHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQGFTALVERISYYLGLGVQSEFQECVRRHGRIEKVSDFCTLQENCNTDALDPKDGRLIK HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHH DCDNLAAFLEAHSSIRNGVSSPHLLEARVRLLTLLRQSPLACLKLDSLLADFD HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC >Mature Secondary Structure ADIRKSLLQLIFSGAYLLRWNDKLRPAELLETDKQAHKMLLACVLWHENSLHMSEEKKV CHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH RLAGDIIEGGLFDYFYRLIITDIKPPIFYRIKENPEQYRQLTDHVLESLQPALSPLGPFW HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHH ERMCRWHHAPDDGSLPRRILTAAHLYASQWEFNLIKPLNSHFDDEMDDIGQSFVDRLHSF HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH TDLKGLEHMRTQGTALNRLANLCGQLRFQIRWTQAPRIPATSVLGHMFIVACFAYFFSLS HHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH VNACRARANNNFFCGLFHDLPEVLTRDIISPVKRSVADLPKIIKEYEEKELERRVFAPLR HHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQGFTALVERISYYLGLGVQSEFQECVRRHGRIEKVSDFCTLQENCNTDALDPKDGRLIK HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHH DCDNLAAFLEAHSSIRNGVSSPHLLEARVRLLTLLRQSPLACLKLDSLLADFD HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA