Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220904334

Identifier: 220904334

GI number: 220904334

Start: 1243770

End: 1245011

Strand: Reverse

Name: 220904334

Synonym: Ddes_1061

Alternate gene names: NA

Gene position: 1245011-1243770 (Counterclockwise)

Preceding gene: 220904346

Following gene: 220904333

Centisome position: 43.33

GC content: 55.72

Gene sequence:

>1242_bases
ATGGCAGATATTCGCAAAAGCTTGCTTCAACTCATTTTTTCAGGTGCGTACCTTCTGCGCTGGAACGACAAATTGCGCCC
GGCGGAACTGCTTGAAACCGACAAGCAGGCGCACAAGATGCTGCTAGCCTGTGTGCTGTGGCATGAAAACTCGCTCCACA
TGTCTGAAGAAAAAAAAGTGCGCCTTGCGGGCGACATTATTGAAGGCGGCCTTTTCGACTATTTCTACCGCCTGATCATA
ACCGACATCAAACCGCCGATCTTTTACCGCATAAAAGAAAATCCCGAACAGTACCGTCAGTTGACAGACCATGTGCTGGA
AAGCCTGCAGCCGGCGCTGTCGCCTCTTGGCCCCTTCTGGGAACGGATGTGCCGCTGGCACCATGCGCCGGATGATGGCA
GCCTGCCCCGGCGCATACTCACGGCCGCGCACCTGTACGCCTCACAGTGGGAATTCAATCTTATCAAGCCCCTCAACAGC
CATTTTGACGACGAAATGGACGATATCGGGCAATCCTTTGTGGACAGGCTGCATTCGTTCACCGACCTGAAGGGCCTGGA
GCATATGCGTACCCAGGGTACAGCCCTGAACCGCCTGGCCAACCTCTGCGGGCAGCTGCGTTTTCAGATCCGCTGGACGC
AGGCTCCGCGCATACCCGCAACGTCCGTACTGGGGCACATGTTTATTGTGGCCTGCTTCGCCTACTTTTTCAGCCTGTCG
GTCAACGCCTGCCGCGCCAGAGCCAACAACAATTTTTTCTGCGGGCTTTTTCATGATCTGCCGGAAGTGCTCACCCGCGA
CATCATCTCGCCGGTCAAGCGCTCTGTGGCTGACCTGCCAAAGATTATCAAGGAATATGAAGAAAAAGAGCTTGAACGCC
GCGTTTTCGCTCCGTTGCGGCAACAGGGATTCACAGCGCTTGTAGAACGCATATCCTACTATCTCGGCCTGGGGGTTCAG
TCCGAATTTCAGGAATGCGTACGGCGCCACGGCAGGATTGAAAAGGTTTCGGACTTCTGCACCCTGCAGGAAAACTGCAA
CACCGACGCCCTTGACCCCAAGGATGGACGCCTTATCAAGGATTGCGACAACCTGGCCGCCTTTCTTGAGGCCCACAGCT
CTATCCGTAACGGTGTTTCGTCCCCCCACCTGCTGGAAGCCCGAGTGCGCCTGCTCACCCTGCTGCGGCAAAGCCCGCTT
GCATGTCTCAAGCTGGATTCTTTGCTGGCGGACTTTGACTAG

Upstream 100 bases:

>100_bases
GTAAAAGCCGCAAAATACGGGGACGTCATGAAGCCCTTGAGCTTTACCCCATATCTTCCTATACTGCCAAGTGTTTTTCC
GACAGGCCTCCGGAGAAAAT

Downstream 100 bases:

>100_bases
ACCATTTAGCCTTCAAGAAGATATGCTCCAAGGCTTGCAAGACATGCGCTGCGGTGTTGGGCCGCGCCGGCAAACCGTAC
AGGCTGGCTTACGCCTCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: HAD Superfamily Hydrolase; Competence Protein ComGF; Metal-Dependent Phosphohydrolase HD Region; Metal Dependent Phosphohydrolase; Cytoplasmic HAD Superfamily Hydrolase

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MADIRKSLLQLIFSGAYLLRWNDKLRPAELLETDKQAHKMLLACVLWHENSLHMSEEKKVRLAGDIIEGGLFDYFYRLII
TDIKPPIFYRIKENPEQYRQLTDHVLESLQPALSPLGPFWERMCRWHHAPDDGSLPRRILTAAHLYASQWEFNLIKPLNS
HFDDEMDDIGQSFVDRLHSFTDLKGLEHMRTQGTALNRLANLCGQLRFQIRWTQAPRIPATSVLGHMFIVACFAYFFSLS
VNACRARANNNFFCGLFHDLPEVLTRDIISPVKRSVADLPKIIKEYEEKELERRVFAPLRQQGFTALVERISYYLGLGVQ
SEFQECVRRHGRIEKVSDFCTLQENCNTDALDPKDGRLIKDCDNLAAFLEAHSSIRNGVSSPHLLEARVRLLTLLRQSPL
ACLKLDSLLADFD

Sequences:

>Translated_413_residues
MADIRKSLLQLIFSGAYLLRWNDKLRPAELLETDKQAHKMLLACVLWHENSLHMSEEKKVRLAGDIIEGGLFDYFYRLII
TDIKPPIFYRIKENPEQYRQLTDHVLESLQPALSPLGPFWERMCRWHHAPDDGSLPRRILTAAHLYASQWEFNLIKPLNS
HFDDEMDDIGQSFVDRLHSFTDLKGLEHMRTQGTALNRLANLCGQLRFQIRWTQAPRIPATSVLGHMFIVACFAYFFSLS
VNACRARANNNFFCGLFHDLPEVLTRDIISPVKRSVADLPKIIKEYEEKELERRVFAPLRQQGFTALVERISYYLGLGVQ
SEFQECVRRHGRIEKVSDFCTLQENCNTDALDPKDGRLIKDCDNLAAFLEAHSSIRNGVSSPHLLEARVRLLTLLRQSPL
ACLKLDSLLADFD
>Mature_412_residues
ADIRKSLLQLIFSGAYLLRWNDKLRPAELLETDKQAHKMLLACVLWHENSLHMSEEKKVRLAGDIIEGGLFDYFYRLIIT
DIKPPIFYRIKENPEQYRQLTDHVLESLQPALSPLGPFWERMCRWHHAPDDGSLPRRILTAAHLYASQWEFNLIKPLNSH
FDDEMDDIGQSFVDRLHSFTDLKGLEHMRTQGTALNRLANLCGQLRFQIRWTQAPRIPATSVLGHMFIVACFAYFFSLSV
NACRARANNNFFCGLFHDLPEVLTRDIISPVKRSVADLPKIIKEYEEKELERRVFAPLRQQGFTALVERISYYLGLGVQS
EFQECVRRHGRIEKVSDFCTLQENCNTDALDPKDGRLIKDCDNLAAFLEAHSSIRNGVSSPHLLEARVRLLTLLRQSPLA
CLKLDSLLADFD

Specific function: Unknown

COG id: COG1896

COG function: function code R; Predicted hydrolases of HD superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47639; Mature: 47508

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADIRKSLLQLIFSGAYLLRWNDKLRPAELLETDKQAHKMLLACVLWHENSLHMSEEKKV
CCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
RLAGDIIEGGLFDYFYRLIITDIKPPIFYRIKENPEQYRQLTDHVLESLQPALSPLGPFW
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHH
ERMCRWHHAPDDGSLPRRILTAAHLYASQWEFNLIKPLNSHFDDEMDDIGQSFVDRLHSF
HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
TDLKGLEHMRTQGTALNRLANLCGQLRFQIRWTQAPRIPATSVLGHMFIVACFAYFFSLS
HHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
VNACRARANNNFFCGLFHDLPEVLTRDIISPVKRSVADLPKIIKEYEEKELERRVFAPLR
HHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQGFTALVERISYYLGLGVQSEFQECVRRHGRIEKVSDFCTLQENCNTDALDPKDGRLIK
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHH
DCDNLAAFLEAHSSIRNGVSSPHLLEARVRLLTLLRQSPLACLKLDSLLADFD
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
ADIRKSLLQLIFSGAYLLRWNDKLRPAELLETDKQAHKMLLACVLWHENSLHMSEEKKV
CHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
RLAGDIIEGGLFDYFYRLIITDIKPPIFYRIKENPEQYRQLTDHVLESLQPALSPLGPFW
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHH
ERMCRWHHAPDDGSLPRRILTAAHLYASQWEFNLIKPLNSHFDDEMDDIGQSFVDRLHSF
HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
TDLKGLEHMRTQGTALNRLANLCGQLRFQIRWTQAPRIPATSVLGHMFIVACFAYFFSLS
HHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
VNACRARANNNFFCGLFHDLPEVLTRDIISPVKRSVADLPKIIKEYEEKELERRVFAPLR
HHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQGFTALVERISYYLGLGVQSEFQECVRRHGRIEKVSDFCTLQENCNTDALDPKDGRLIK
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHH
DCDNLAAFLEAHSSIRNGVSSPHLLEARVRLLTLLRQSPLACLKLDSLLADFD
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA