| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884754
Identifier: 218884754
GI number: 218884754
Start: 1335109
End: 1336437
Strand: Direct
Name: 218884754
Synonym: DKAM_1443
Alternate gene names: NA
Gene position: 1335109-1336437 (Clockwise)
Preceding gene: 218884751
Following gene: 218884756
Centisome position: 97.79
GC content: 40.41
Gene sequence:
>1329_bases GTGAAGACGGGCTTAAACACTAGCTTTCTCAGGCGTGAATGGAGAATAATAGTAGCTAACATAGTAGTGTTTGTATTAGC TGTATCCGGCTGGAACTACTATGATGTAAGGTACTTTATAAACTACTGGTTCGACTACTTTAAGGAAGGCAGGTTACTAG AAATATATAGCGGGCCGTTTAGGGCTAAAGTTGCTTATCCACCATTAGCGGTATACCTATTTATTTCAACCCACCTCATA GCTTCTAGCATAGATGGTAATCTCGCTGTTAAGCTAATAGATAAGCTTCCCTTAATCATGGCATTCAACTGTATATACTT CATCTTGAGGAGAAGATATGGAAGTTCAGCCGGCAATCTATGGCTCTTGAACTACATTGGGTACGCTATAATAGCTAGTT TTCAATTCGACATGGTAGCAGTATTATTCCTGCTCATGGGCTTCATATACTTAACCGAGGGGAGGTATGTGAGGTCAACC ATAATGATAGTGCTTTCAGCGCTTATAAAGCAGTTACTAGCGGTGTTCTTTCTATTTATACCATTAATACTGCTTGCCCG GAGGGACTATAGAAATATGGCTAAATCAATAGGGGCAGCCGTCTTGACGGCTTCGTTATTTACCCTGCCTTTCCTCATAT ATGATCCCTGGGGGTTTATTAATAAAGTAGTATTGTTCCATGGCTCCCGTTACCCCCAGCAATATAGCCTCTGGGCCCTC CCGGTTTACCTGAGCTGGTTCAACCTGGCTTCACTCCCTTCATGGCTTACTTGGGTATGGATAATACCGTTTACACTGGC ATTACTAATAGTATACGTTGATTTCTATCGTAAAGGGGCTCCTCAGGATCCCGACATACTGCTAATATATTTTACTGCTA CATCAATACTACTGCTTTTACTTAATAAAGTCGGGAATGTCAACTACTATCTCTGGGCTTCTCTGTTTATCACGATATAT TTATCGAGTTATTTCCCGAGGTTGTCGAGTAAACTACTATCCCTCTACATATTCATCCCACTACTCATAGGGCTTATAGC TGGCTTCTTCATAGAGTTTACTGCTGCAGTCGTGGGTGATGATATATTAATAGTGGAGGATTCAAACTGGGTTTCAGCAG AGCAACTCATTGCATTAAGTGTCGGTATAGACTCTATTATATATAAGTTCATTATTTATATACGTAGCTCCCCTGCCTTC TATACTTTATTCAGCATCCTCAATAACGGGAGGAGTATATCGGCTGTATTGATAACCATCATATATAATGCATACCTGAT CTATATGTTGATCCTTGTAACACATCATTCTCGGTGGTTTAAGCATTAA
Upstream 100 bases:
>100_bases TTCGTGCACCCTTCGCGTTTCAAGTATTGGAAACACAGGTAAAACATTTTATTGTTTTTCCTAGCATTATTGAGTAATAG TATTCGGCGGTGCCTCTAAT
Downstream 100 bases:
>100_bases TGTTTTCCATGTAAGCATAATATGAGCATAATATTTACAGGATCATGTGTGGTGGAGGGTCATTCTCTAAAAAACGGGTT TAGAGGGTATATTTCCAGAC
Product: GPI mannosyltransferase 1
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MKTGLNTSFLRREWRIIVANIVVFVLAVSGWNYYDVRYFINYWFDYFKEGRLLEIYSGPFRAKVAYPPLAVYLFISTHLI ASSIDGNLAVKLIDKLPLIMAFNCIYFILRRRYGSSAGNLWLLNYIGYAIIASFQFDMVAVLFLLMGFIYLTEGRYVRST IMIVLSALIKQLLAVFFLFIPLILLARRDYRNMAKSIGAAVLTASLFTLPFLIYDPWGFINKVVLFHGSRYPQQYSLWAL PVYLSWFNLASLPSWLTWVWIIPFTLALLIVYVDFYRKGAPQDPDILLIYFTATSILLLLLNKVGNVNYYLWASLFITIY LSSYFPRLSSKLLSLYIFIPLLIGLIAGFFIEFTAAVVGDDILIVEDSNWVSAEQLIALSVGIDSIIYKFIIYIRSSPAF YTLFSILNNGRSISAVLITIIYNAYLIYMLILVTHHSRWFKH
Sequences:
>Translated_442_residues MKTGLNTSFLRREWRIIVANIVVFVLAVSGWNYYDVRYFINYWFDYFKEGRLLEIYSGPFRAKVAYPPLAVYLFISTHLI ASSIDGNLAVKLIDKLPLIMAFNCIYFILRRRYGSSAGNLWLLNYIGYAIIASFQFDMVAVLFLLMGFIYLTEGRYVRST IMIVLSALIKQLLAVFFLFIPLILLARRDYRNMAKSIGAAVLTASLFTLPFLIYDPWGFINKVVLFHGSRYPQQYSLWAL PVYLSWFNLASLPSWLTWVWIIPFTLALLIVYVDFYRKGAPQDPDILLIYFTATSILLLLLNKVGNVNYYLWASLFITIY LSSYFPRLSSKLLSLYIFIPLLIGLIAGFFIEFTAAVVGDDILIVEDSNWVSAEQLIALSVGIDSIIYKFIIYIRSSPAF YTLFSILNNGRSISAVLITIIYNAYLIYMLILVTHHSRWFKH >Mature_442_residues MKTGLNTSFLRREWRIIVANIVVFVLAVSGWNYYDVRYFINYWFDYFKEGRLLEIYSGPFRAKVAYPPLAVYLFISTHLI ASSIDGNLAVKLIDKLPLIMAFNCIYFILRRRYGSSAGNLWLLNYIGYAIIASFQFDMVAVLFLLMGFIYLTEGRYVRST IMIVLSALIKQLLAVFFLFIPLILLARRDYRNMAKSIGAAVLTASLFTLPFLIYDPWGFINKVVLFHGSRYPQQYSLWAL PVYLSWFNLASLPSWLTWVWIIPFTLALLIVYVDFYRKGAPQDPDILLIYFTATSILLLLLNKVGNVNYYLWASLFITIY LSSYFPRLSSKLLSLYIFIPLLIGLIAGFFIEFTAAVVGDDILIVEDSNWVSAEQLIALSVGIDSIIYKFIIYIRSSPAF YTLFSILNNGRSISAVLITIIYNAYLIYMLILVTHHSRWFKH
Specific function: Unknown
COG id: COG5650
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51035; Mature: 51035
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTGLNTSFLRREWRIIVANIVVFVLAVSGWNYYDVRYFINYWFDYFKEGRLLEIYSGPF CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC RAKVAYPPLAVYLFISTHLIASSIDGNLAVKLIDKLPLIMAFNCIYFILRRRYGSSAGNL EEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE WLLNYIGYAIIASFQFDMVAVLFLLMGFIYLTEGRYVRSTIMIVLSALIKQLLAVFFLFI EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH PLILLARRDYRNMAKSIGAAVLTASLFTLPFLIYDPWGFINKVVLFHGSRYPQQYSLWAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHH PVYLSWFNLASLPSWLTWVWIIPFTLALLIVYVDFYRKGAPQDPDILLIYFTATSILLLL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHH LNKVGNVNYYLWASLFITIYLSSYFPRLSSKLLSLYIFIPLLIGLIAGFFIEFTAAVVGD HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DILIVEDSNWVSAEQLIALSVGIDSIIYKFIIYIRSSPAFYTLFSILNNGRSISAVLITI CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHH IYNAYLIYMLILVTHHSRWFKH HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTGLNTSFLRREWRIIVANIVVFVLAVSGWNYYDVRYFINYWFDYFKEGRLLEIYSGPF CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC RAKVAYPPLAVYLFISTHLIASSIDGNLAVKLIDKLPLIMAFNCIYFILRRRYGSSAGNL EEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE WLLNYIGYAIIASFQFDMVAVLFLLMGFIYLTEGRYVRSTIMIVLSALIKQLLAVFFLFI EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH PLILLARRDYRNMAKSIGAAVLTASLFTLPFLIYDPWGFINKVVLFHGSRYPQQYSLWAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHH PVYLSWFNLASLPSWLTWVWIIPFTLALLIVYVDFYRKGAPQDPDILLIYFTATSILLLL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHH LNKVGNVNYYLWASLFITIYLSSYFPRLSSKLLSLYIFIPLLIGLIAGFFIEFTAAVVGD HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DILIVEDSNWVSAEQLIALSVGIDSIIYKFIIYIRSSPAFYTLFSILNNGRSISAVLITI CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHH IYNAYLIYMLILVTHHSRWFKH HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA