| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is pckG [H]
Identifier: 218884690
GI number: 218884690
Start: 1281770
End: 1283680
Strand: Direct
Name: pckG [H]
Synonym: DKAM_1379
Alternate gene names: 218884690
Gene position: 1281770-1283680 (Clockwise)
Preceding gene: 218884689
Following gene: 218884693
Centisome position: 93.89
GC content: 45.16
Gene sequence:
>1911_bases ATGATACGGGGAACATATATGGATACTTACATGGATGATATGCTTACCCGTCTCTCCAGATATGCTAGCAGAGAATCCAT TGAGAGAATCTCGAGGATAAATAATAGAAAACTCATTGAATGGATTACAGAGGTCGCGGAGCTTCTCGAGCCCAGCTCCA TATTCGTTAACACTGGTACAAAGGAGGATCTAGAGTATATTAGGAGACGGGCTATTGAGAAAGGAGAGGAGATACCCAGT AAATACAATCCGCTCCACACGGTTCACTTCGATGGCGTGTTTGATTTAGCAAGGGATAGGGAGAATACTAGGATTCTCAC TGTGGGTGGTACATCTATCTCGATGATTAATACCAGGGATAGAGAGGAGGGCTTGAGGGAACTTAGGGAGATATATAAGG GTATAATGAAGGGTAAGGAGATGTATATAGGGTTCTACTGCTTCGGTCCAAAAGATTCATCGTTCACCCTCTACGGTGTT CAGGTGACTGATTCGGCGTATGTCATGCATAGTGAGAATATACTCTACAGGGTATGCTACGATGTATTTGTTGAGAAAGG CGAGTCACTAAGATACATGAGGTTCCTCCATAGTACAGGAGAATTAAACGAGTATGGATGGAGTAAGAATGTGTCGAAGA GAAGGATCTACGTGGATCTGTTGGAGAATATGACATACAGCGTTAACACCCAGTATGCTGGAAACACAGTGGGATTAAAG AAGCTCTCATTAAGGCTCTGCGTCTACCAGGGGTACAGGGAGGGATGGCTCTGCGAGCATATGTTCATAGTTGGAGTCAA GGGGCCGGGTGATAGAGTATCATATTTCACGGGCGCATTCCCAGCTGGATGCGGTAAGACCTCTACAGCATTAATAGCTG ATACCGTGGTCGGGGATGATTTAGCAATAATAAGAAACGTTAATGGTGAGGCAAGGGGAGTGAACCCTGAAGTAGGCATG TTTGGAATAATTGATGGAGTCAACCCCGTGGATGACCCCGAGATATATAGGATACTTACATCTAGGGATACAGAAGTCAT ATTTGCAAATGTCCTTCTAACAGAAGACGGTGAAGTATGGTGGAATGGTAAGACTAGTGAGCCCAGAAAGGGAATAAACT ATGCCGGCGAATGGTGGCCGGGTAAACTGGATGAAAAGGGTAGGCCTGTACCACCATCTCATCCAAACGCCAGGTTCACA ACCAGTATATTCTACCTGAGTAAGGTGGACCCCAGGATAAATGACCCTATGGGTGTACCGGTTCACGGTATGATCTTTGG CGGAAGAGACTCAGATACATGGGTGCCTGTGGAGGAGGCGTTTAACTGGGTTCATGGAATAGTCACAAAGGCTGCATCAC TGGAATCCGAGAGAACCACGGCTGTGCTCGGCAAGGCCGGCGAAAGAGAGTTCAATCCATTTGCTATACTGGACTTCCTC TCAATATCACCAGGGGACTTCATAAACCTACACTTTAAATTCGGCGAGGAATTAACCAGAGAGCCGAGGATATATGGTGT CAACTACTTCCTCAGGGATGATAAAGGAAGGTACCTGACTGAGAAAGTGGATAAAAGAGTATGGTTAAAATGGATGGAGC TCAGGGCAAACAATGACGTGGATGCATTAGAGACTCCTACAGGCTTTATACCGTTGTATGATGACCTGGCTGAATTATTC AGGAGGGAGCTCAATAAGGAGTTTCCCGTGGAGCTATATGAGAAACTCTTCACGATAAGGGTGGATAAGCACCTCGAGAA AGCAGAGAGAATATATAGGATATATTATGAGAAAACACCTGAAACACCCAGGTTATTCTTCGACACATTATTAGAGCATA AGAGAAGGCTTAAGCAGGCACTGGATAAATATGGCTCGTTGATCCCACCGTCCAAGTTAGATAGGAGATGA
Upstream 100 bases:
>100_bases TATTCATCTCCTAGTCCAGGGGAACACGGGTTACAACCGAAAGCCTCGCCCTTTAGGACAGGGATGAGGTCAGATGTTTT ATTAATTTTGTAAATATATT
Downstream 100 bases:
>100_bases AAGGAAAAAGATGGTTCACCGGTTTAAGGCGGGTAATGCGGGCCCGCCGGGATTTGAACCCGGGACCTACGGGTTAAAAG CCCGCCGCTCTACCAAGCTG
Product: phosphoenolpyruvate carboxykinase
Products: NA
Alternate protein names: PEP carboxykinase; PEPCK; Phosphoenolpyruvate carboxylase [H]
Number of amino acids: Translated: 636; Mature: 636
Protein sequence:
>636_residues MIRGTYMDTYMDDMLTRLSRYASRESIERISRINNRKLIEWITEVAELLEPSSIFVNTGTKEDLEYIRRRAIEKGEEIPS KYNPLHTVHFDGVFDLARDRENTRILTVGGTSISMINTRDREEGLRELREIYKGIMKGKEMYIGFYCFGPKDSSFTLYGV QVTDSAYVMHSENILYRVCYDVFVEKGESLRYMRFLHSTGELNEYGWSKNVSKRRIYVDLLENMTYSVNTQYAGNTVGLK KLSLRLCVYQGYREGWLCEHMFIVGVKGPGDRVSYFTGAFPAGCGKTSTALIADTVVGDDLAIIRNVNGEARGVNPEVGM FGIIDGVNPVDDPEIYRILTSRDTEVIFANVLLTEDGEVWWNGKTSEPRKGINYAGEWWPGKLDEKGRPVPPSHPNARFT TSIFYLSKVDPRINDPMGVPVHGMIFGGRDSDTWVPVEEAFNWVHGIVTKAASLESERTTAVLGKAGEREFNPFAILDFL SISPGDFINLHFKFGEELTREPRIYGVNYFLRDDKGRYLTEKVDKRVWLKWMELRANNDVDALETPTGFIPLYDDLAELF RRELNKEFPVELYEKLFTIRVDKHLEKAERIYRIYYEKTPETPRLFFDTLLEHKRRLKQALDKYGSLIPPSKLDRR
Sequences:
>Translated_636_residues MIRGTYMDTYMDDMLTRLSRYASRESIERISRINNRKLIEWITEVAELLEPSSIFVNTGTKEDLEYIRRRAIEKGEEIPS KYNPLHTVHFDGVFDLARDRENTRILTVGGTSISMINTRDREEGLRELREIYKGIMKGKEMYIGFYCFGPKDSSFTLYGV QVTDSAYVMHSENILYRVCYDVFVEKGESLRYMRFLHSTGELNEYGWSKNVSKRRIYVDLLENMTYSVNTQYAGNTVGLK KLSLRLCVYQGYREGWLCEHMFIVGVKGPGDRVSYFTGAFPAGCGKTSTALIADTVVGDDLAIIRNVNGEARGVNPEVGM FGIIDGVNPVDDPEIYRILTSRDTEVIFANVLLTEDGEVWWNGKTSEPRKGINYAGEWWPGKLDEKGRPVPPSHPNARFT TSIFYLSKVDPRINDPMGVPVHGMIFGGRDSDTWVPVEEAFNWVHGIVTKAASLESERTTAVLGKAGEREFNPFAILDFL SISPGDFINLHFKFGEELTREPRIYGVNYFLRDDKGRYLTEKVDKRVWLKWMELRANNDVDALETPTGFIPLYDDLAELF RRELNKEFPVELYEKLFTIRVDKHLEKAERIYRIYYEKTPETPRLFFDTLLEHKRRLKQALDKYGSLIPPSKLDRR >Mature_636_residues MIRGTYMDTYMDDMLTRLSRYASRESIERISRINNRKLIEWITEVAELLEPSSIFVNTGTKEDLEYIRRRAIEKGEEIPS KYNPLHTVHFDGVFDLARDRENTRILTVGGTSISMINTRDREEGLRELREIYKGIMKGKEMYIGFYCFGPKDSSFTLYGV QVTDSAYVMHSENILYRVCYDVFVEKGESLRYMRFLHSTGELNEYGWSKNVSKRRIYVDLLENMTYSVNTQYAGNTVGLK KLSLRLCVYQGYREGWLCEHMFIVGVKGPGDRVSYFTGAFPAGCGKTSTALIADTVVGDDLAIIRNVNGEARGVNPEVGM FGIIDGVNPVDDPEIYRILTSRDTEVIFANVLLTEDGEVWWNGKTSEPRKGINYAGEWWPGKLDEKGRPVPPSHPNARFT TSIFYLSKVDPRINDPMGVPVHGMIFGGRDSDTWVPVEEAFNWVHGIVTKAASLESERTTAVLGKAGEREFNPFAILDFL SISPGDFINLHFKFGEELTREPRIYGVNYFLRDDKGRYLTEKVDKRVWLKWMELRANNDVDALETPTGFIPLYDDLAELF RRELNKEFPVELYEKLFTIRVDKHLEKAERIYRIYYEKTPETPRLFFDTLLEHKRRLKQALDKYGSLIPPSKLDRR
Specific function: Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle [H]
COG id: COG1274
COG function: function code C; Phosphoenolpyruvate carboxykinase (GTP)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoenolpyruvate carboxykinase [GTP] family [H]
Homologues:
Organism=Homo sapiens, GI66346721, Length=544, Percent_Identity=31.6176470588235, Blast_Score=230, Evalue=4e-60, Organism=Homo sapiens, GI187281517, Length=591, Percent_Identity=29.4416243654822, Blast_Score=210, Evalue=3e-54, Organism=Homo sapiens, GI66346723, Length=386, Percent_Identity=30.0518134715026, Blast_Score=149, Evalue=9e-36, Organism=Caenorhabditis elegans, GI17555492, Length=553, Percent_Identity=28.3905967450271, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI32564411, Length=556, Percent_Identity=28.0575539568345, Blast_Score=206, Evalue=3e-53, Organism=Caenorhabditis elegans, GI71989658, Length=595, Percent_Identity=27.2268907563025, Blast_Score=205, Evalue=6e-53, Organism=Caenorhabditis elegans, GI71989645, Length=595, Percent_Identity=27.2268907563025, Blast_Score=204, Evalue=9e-53, Organism=Caenorhabditis elegans, GI71989653, Length=583, Percent_Identity=26.7581475128645, Blast_Score=196, Evalue=4e-50, Organism=Caenorhabditis elegans, GI32564407, Length=484, Percent_Identity=29.1322314049587, Blast_Score=194, Evalue=1e-49, Organism=Caenorhabditis elegans, GI71989649, Length=481, Percent_Identity=28.8981288981289, Blast_Score=181, Evalue=8e-46, Organism=Caenorhabditis elegans, GI32564409, Length=307, Percent_Identity=29.3159609120521, Blast_Score=128, Evalue=1e-29, Organism=Drosophila melanogaster, GI24655082, Length=603, Percent_Identity=29.5190713101161, Blast_Score=236, Evalue=3e-62, Organism=Drosophila melanogaster, GI24655085, Length=541, Percent_Identity=29.0203327171904, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI161077226, Length=545, Percent_Identity=30.8256880733945, Blast_Score=224, Evalue=2e-58, Organism=Drosophila melanogaster, GI24655088, Length=444, Percent_Identity=31.7567567567568, Blast_Score=218, Evalue=8e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018091 - InterPro: IPR013035 - InterPro: IPR008209 - InterPro: IPR008210 [H]
Pfam domain/function: PF00821 PEPCK [H]
EC number: =4.1.1.32 [H]
Molecular weight: Translated: 73418; Mature: 73418
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRGTYMDTYMDDMLTRLSRYASRESIERISRINNRKLIEWITEVAELLEPSSIFVNTGT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCC KEDLEYIRRRAIEKGEEIPSKYNPLHTVHFDGVFDLARDRENTRILTVGGTSISMINTRD HHHHHHHHHHHHHHHHHCCHHCCCEEEEEECCHHHHHCCCCCCEEEEECCCEEEEECCCC REEGLRELREIYKGIMKGKEMYIGFYCFGPKDSSFTLYGVQVTDSAYVMHSENILYRVCY HHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEEEEEEECCEEEEECCCHHHHHHH DVFVEKGESLRYMRFLHSTGELNEYGWSKNVSKRRIYVDLLENMTYSVNTQYAGNTVGLK HHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCHH KLSLRLCVYQGYREGWLCEHMFIVGVKGPGDRVSYFTGAFPAGCGKTSTALIADTVVGDD HHHHHHEEHHCCCCCCEEEEEEEEEECCCCCCCEEECCCCCCCCCCCCCCEEEHHHCCCC LAIIRNVNGEARGVNPEVGMFGIIDGVNPVDDPEIYRILTSRDTEVIFANVLLTEDGEVW EEEEECCCCCCCCCCCCCCEEEEECCCCCCCCHHHEEEECCCCCEEEEEEEEEECCCCEE WNGKTSEPRKGINYAGEWWPGKLDEKGRPVPPSHPNARFTTSIFYLSKVDPRINDPMGVP ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCC VHGMIFGGRDSDTWVPVEEAFNWVHGIVTKAASLESERTTAVLGKAGEREFNPFAILDFL EEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCEEEEEEH SISPGDFINLHFKFGEELTREPRIYGVNYFLRDDKGRYLTEKVDKRVWLKWMELRANNDV CCCCCCEEEEEEECCHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCC DALETPTGFIPLYDDLAELFRRELNKEFPVELYEKLFTIRVDKHLEKAERIYRIYYEKTP CCCCCCCCCEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ETPRLFFDTLLEHKRRLKQALDKYGSLIPPSKLDRR CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCC >Mature Secondary Structure MIRGTYMDTYMDDMLTRLSRYASRESIERISRINNRKLIEWITEVAELLEPSSIFVNTGT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCC KEDLEYIRRRAIEKGEEIPSKYNPLHTVHFDGVFDLARDRENTRILTVGGTSISMINTRD HHHHHHHHHHHHHHHHHCCHHCCCEEEEEECCHHHHHCCCCCCEEEEECCCEEEEECCCC REEGLRELREIYKGIMKGKEMYIGFYCFGPKDSSFTLYGVQVTDSAYVMHSENILYRVCY HHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEEEEEEECCEEEEECCCHHHHHHH DVFVEKGESLRYMRFLHSTGELNEYGWSKNVSKRRIYVDLLENMTYSVNTQYAGNTVGLK HHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCHH KLSLRLCVYQGYREGWLCEHMFIVGVKGPGDRVSYFTGAFPAGCGKTSTALIADTVVGDD HHHHHHEEHHCCCCCCEEEEEEEEEECCCCCCCEEECCCCCCCCCCCCCCEEEHHHCCCC LAIIRNVNGEARGVNPEVGMFGIIDGVNPVDDPEIYRILTSRDTEVIFANVLLTEDGEVW EEEEECCCCCCCCCCCCCCEEEEECCCCCCCCHHHEEEECCCCCEEEEEEEEEECCCCEE WNGKTSEPRKGINYAGEWWPGKLDEKGRPVPPSHPNARFTTSIFYLSKVDPRINDPMGVP ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCC VHGMIFGGRDSDTWVPVEEAFNWVHGIVTKAASLESERTTAVLGKAGEREFNPFAILDFL EEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCEEEEEEH SISPGDFINLHFKFGEELTREPRIYGVNYFLRDDKGRYLTEKVDKRVWLKWMELRANNDV CCCCCCEEEEEEECCHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCC DALETPTGFIPLYDDLAELFRRELNKEFPVELYEKLFTIRVDKHLEKAERIYRIYYEKTP CCCCCCCCCEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ETPRLFFDTLLEHKRRLKQALDKYGSLIPPSKLDRR CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA