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The map label for this gene is yaaJ [C]

Identifier: 218884693

GI number: 218884693

Start: 1285785

End: 1287188

Strand: Direct

Name: yaaJ [C]

Synonym: DKAM_1382

Alternate gene names: 218884693

Gene position: 1285785-1287188 (Clockwise)

Preceding gene: 218884690

Following gene: 218884695

Centisome position: 94.18

GC content: 45.51

Gene sequence:

>1404_bases
GTGGGTGTACTTGAATCGATAATTGAAGCAATAAACTTCATAGATGGACTAGTATGGGGTCTTCCTGCGGTAATAATATT
GGCTGGAACAGGGCTCTCGATAGCGATTCTCGGCCGTTTATTCCAGGTAACCAAGTTTAAAGCTGTACTTAAGAACATGT
TGTATAAGGGTACGGGTGGTAAGGGAGAGGTAAGTCCATTTGCGACATGGGCTGCAGTTATGGGGGCCACGGTGGGTGTA
GGTAATATAGCCGGTGTCTCCACAGCTGTTCATTTAGGTGGTGCTGGCGCGCTCTTCTGGATGTGGGTTTGCGCTATCCT
TGGGATGGGTACTAAAGCCGTTGAAGCCACGCTGGGTGCTTGGTCTCGGAGAATCACGCCGGATGGGAAAGTTGAAGGGG
GTACACCATATTATATAAGGCTGGTGCCGACTGTAGGCCCGGCGCTCGCAGTGTTATTCTCTATATTCGCATTTATCGCT
GCGTATGGTATAGGTAATACTGTGCAGGCGAATAATGTGGCCCTTGGTGTTGAATATATTGCTAAAGCCTATGGATTTGA
TGTTTTCCAAGCAAAGTTGATAACGGGTATATTAATGTTCATATTTACAGCAATAGTAGTCTTGGGCGGTGTCAGAAGGA
TCGCTGATGTATCGAACTTCCTGGTGCCGTTCATGGCTACATGGTATATTGTGGCATCACTTGTGATATGGATAAAATAT
GGCAGTAATCTCCCGCTGGCTTTCAGAGAGATATTTACTTATGCATTCACACCGCAGGCAGCAGCAGGCGGTCTCTCTGG
TTGGCTAGTTTACTCGGCTATCAGATACGGCTTTGCAAGGGGGTTGTTCTCTAATGAGGCTGGATTGGGCAGTGCTCCAA
ACATGTATGCGTATATGAGTGTCGACCACCCTGGTAGAGTAGGTCTCTACGGCATCTTCGAGGTTTTCATGGATACAATA
GTCATATGCTCTATGACCGGTATAGTTGATATAGTTACCCGTGTATATATCGAGAGACCAGATCTATCTGGTGCACAATT
AGCCATGGAGGCTTTCTATAGAACCTATGGAATATGGGCGCCTGTAGTACTTGGTTTAGCATTAGCATTATTCGCGTATA
CAACCCTGTTGACATGGGAGTGGTATGGTGAGGTCAACTGGATCTACTTCTGGGGTAAAACACTTAAATTACCTGAGAAA
CCAATGAGGTGGATATGGAGGTTCATGTGGGTTATACCCATAATACCTGCAGCAATTGCTGAAACAAAAATGTTCGAGGT
ATTCTGGAATTTCGCTGATACGGCAAATGGTCTTATGGCTATACCAAACCTGATAGCTGTCGCGTATTTTGCACCAGTGG
GTATAGGGCTTATAAGGGATTTCCTAAGGTCTGGAAAAATATAA

Upstream 100 bases:

>100_bases
AGGAACACATAATAAATGTTTCCTTATTATTTGGAAACATTTAAAAATAATGCAATAGTATATAAACTGTGGATAGGTAA
AAATGTGATGGGGATCTTGA

Downstream 100 bases:

>100_bases
TTGATTCATGCATCTGATTCATCTAAAATAATTTTTTGCTGACTCATTTATCATGCCTTGGAGCGGATTACTCCTTCATA
TGCTAGCTTATATATTTCAC

Product: Sodium:alanine symporter

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MGVLESIIEAINFIDGLVWGLPAVIILAGTGLSIAILGRLFQVTKFKAVLKNMLYKGTGGKGEVSPFATWAAVMGATVGV
GNIAGVSTAVHLGGAGALFWMWVCAILGMGTKAVEATLGAWSRRITPDGKVEGGTPYYIRLVPTVGPALAVLFSIFAFIA
AYGIGNTVQANNVALGVEYIAKAYGFDVFQAKLITGILMFIFTAIVVLGGVRRIADVSNFLVPFMATWYIVASLVIWIKY
GSNLPLAFREIFTYAFTPQAAAGGLSGWLVYSAIRYGFARGLFSNEAGLGSAPNMYAYMSVDHPGRVGLYGIFEVFMDTI
VICSMTGIVDIVTRVYIERPDLSGAQLAMEAFYRTYGIWAPVVLGLALALFAYTTLLTWEWYGEVNWIYFWGKTLKLPEK
PMRWIWRFMWVIPIIPAAIAETKMFEVFWNFADTANGLMAIPNLIAVAYFAPVGIGLIRDFLRSGKI

Sequences:

>Translated_467_residues
MGVLESIIEAINFIDGLVWGLPAVIILAGTGLSIAILGRLFQVTKFKAVLKNMLYKGTGGKGEVSPFATWAAVMGATVGV
GNIAGVSTAVHLGGAGALFWMWVCAILGMGTKAVEATLGAWSRRITPDGKVEGGTPYYIRLVPTVGPALAVLFSIFAFIA
AYGIGNTVQANNVALGVEYIAKAYGFDVFQAKLITGILMFIFTAIVVLGGVRRIADVSNFLVPFMATWYIVASLVIWIKY
GSNLPLAFREIFTYAFTPQAAAGGLSGWLVYSAIRYGFARGLFSNEAGLGSAPNMYAYMSVDHPGRVGLYGIFEVFMDTI
VICSMTGIVDIVTRVYIERPDLSGAQLAMEAFYRTYGIWAPVVLGLALALFAYTTLLTWEWYGEVNWIYFWGKTLKLPEK
PMRWIWRFMWVIPIIPAAIAETKMFEVFWNFADTANGLMAIPNLIAVAYFAPVGIGLIRDFLRSGKI
>Mature_466_residues
GVLESIIEAINFIDGLVWGLPAVIILAGTGLSIAILGRLFQVTKFKAVLKNMLYKGTGGKGEVSPFATWAAVMGATVGVG
NIAGVSTAVHLGGAGALFWMWVCAILGMGTKAVEATLGAWSRRITPDGKVEGGTPYYIRLVPTVGPALAVLFSIFAFIAA
YGIGNTVQANNVALGVEYIAKAYGFDVFQAKLITGILMFIFTAIVVLGGVRRIADVSNFLVPFMATWYIVASLVIWIKYG
SNLPLAFREIFTYAFTPQAAAGGLSGWLVYSAIRYGFARGLFSNEAGLGSAPNMYAYMSVDHPGRVGLYGIFEVFMDTIV
ICSMTGIVDIVTRVYIERPDLSGAQLAMEAFYRTYGIWAPVVLGLALALFAYTTLLTWEWYGEVNWIYFWGKTLKLPEKP
MRWIWRFMWVIPIIPAAIAETKMFEVFWNFADTANGLMAIPNLIAVAYFAPVGIGLIRDFLRSGKI

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=462, Percent_Identity=31.6017316017316, Blast_Score=182, Evalue=5e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 50820; Mature: 50688

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GVLESIIEAINFIDGLVWGLPAVIILAGTGLSIAILGRLFQVTKFKAVLKNMLYKGTGG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC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HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]