Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
---|---|
Accession | NC_011766 |
Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is 218884568
Identifier: 218884568
GI number: 218884568
Start: 1176152
End: 1176802
Strand: Direct
Name: 218884568
Synonym: DKAM_1257
Alternate gene names: NA
Gene position: 1176152-1176802 (Clockwise)
Preceding gene: 218884567
Following gene: 218884571
Centisome position: 86.15
GC content: 41.78
Gene sequence:
>651_bases ATGCTAGGATACCTAACCACGAGGCATATTGTACGTGAGCTCAAACTCCAGAAGATAGGATTCATTAAGACAAGATACAT GCCGGAGTTCACAATGTACAGTAGGGAGCGGGGATTAATGTATCCATTTGAAGTATATGCTGGAAAAATAGGGAGTAATA ACGCTGTCATCGTGTTGCATAATGCAACTCCAAGCGAGAAGGAGAGGACTAGTTACACAGAGTACTTGGCTAAACTGGCT AGGGATATCGGTGCTAAAGAAGTGATATTGGTAGGTGGATTAGACCCCAGCCTAAGGGAAGATGTGAATGAGAAGTATAG ATGGATACCTATAGGTAACACAGGTATCAAGCTTAATGCAAAGCTCTTGGAGGAGAGACATGTAATAGGACCACTTGCAC TAACAATGATGTTTATGAACGCGTATGGGTTAAGCGGCGTAACTATTCTAGCATACACAGAGCTCTATAGACCAGATCCA AAGGCGAGTGCTGTAGCCGTTGAGGTTATAAGTAGTATACTGGGTGTTGAAATAAATACTTCATCACTACTTGAGGAGGC ATCCCTTATAGAGGCTATAGAGGCTGAAAGAGAAAAAGTTGAAAAGGCTATAGAGGAATCTGAGAAGAAATCTCGTCTAT CCTATATATAG
Upstream 100 bases:
>100_bases TTAAAAAATGAGTTCATTGATATCCCTTGTTAAGACGTCAGAACTCGATCTACGTGAGCTAAGCCCGTCATACTTTATAA CTGGCTATCAAGGATTCGGT
Downstream 100 bases:
>100_bases CTATTTTATCCCTTAAGTCTGGGAAAGCCCTTAGTATTTTGGTGTATAGTTTTCTAGTGAACCAGCTGGCTTCCACTATG ATTATCTTCTTGGCTCCTTG
Product: ATP-grasp superfamily protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MLGYLTTRHIVRELKLQKIGFIKTRYMPEFTMYSRERGLMYPFEVYAGKIGSNNAVIVLHNATPSEKERTSYTEYLAKLA RDIGAKEVILVGGLDPSLREDVNEKYRWIPIGNTGIKLNAKLLEERHVIGPLALTMMFMNAYGLSGVTILAYTELYRPDP KASAVAVEVISSILGVEINTSSLLEEASLIEAIEAEREKVEKAIEESEKKSRLSYI
Sequences:
>Translated_216_residues MLGYLTTRHIVRELKLQKIGFIKTRYMPEFTMYSRERGLMYPFEVYAGKIGSNNAVIVLHNATPSEKERTSYTEYLAKLA RDIGAKEVILVGGLDPSLREDVNEKYRWIPIGNTGIKLNAKLLEERHVIGPLALTMMFMNAYGLSGVTILAYTELYRPDP KASAVAVEVISSILGVEINTSSLLEEASLIEAIEAEREKVEKAIEESEKKSRLSYI >Mature_216_residues MLGYLTTRHIVRELKLQKIGFIKTRYMPEFTMYSRERGLMYPFEVYAGKIGSNNAVIVLHNATPSEKERTSYTEYLAKLA RDIGAKEVILVGGLDPSLREDVNEKYRWIPIGNTGIKLNAKLLEERHVIGPLALTMMFMNAYGLSGVTILAYTELYRPDP KASAVAVEVISSILGVEINTSSLLEEASLIEAIEAEREKVEKAIEESEKKSRLSYI
Specific function: Unknown
COG id: COG1938
COG function: function code R; Archaeal enzymes of ATP-grasp superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24321; Mature: 24321
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGYLTTRHIVRELKLQKIGFIKTRYMPEFTMYSRERGLMYPFEVYAGKIGSNNAVIVLH CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHCCCCCCCCEEEEEE NATPSEKERTSYTEYLAKLARDIGAKEVILVGGLDPSLREDVNEKYRWIPIGNTGIKLNA CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCEEEEEECCCCEEEHH KLLEERHVIGPLALTMMFMNAYGLSGVTILAYTELYRPDPKASAVAVEVISSILGVEINT HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHCCCCCHHHHHHHHHHHHHCCCCCH SSLLEEASLIEAIEAEREKVEKAIEESEKKSRLSYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLGYLTTRHIVRELKLQKIGFIKTRYMPEFTMYSRERGLMYPFEVYAGKIGSNNAVIVLH CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHCCCCCCCCEEEEEE NATPSEKERTSYTEYLAKLARDIGAKEVILVGGLDPSLREDVNEKYRWIPIGNTGIKLNA CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCEEEEEECCCCEEEHH KLLEERHVIGPLALTMMFMNAYGLSGVTILAYTELYRPDPKASAVAVEVISSILGVEINT HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHCCCCCHHHHHHHHHHHHHCCCCCH SSLLEEASLIEAIEAEREKVEKAIEESEKKSRLSYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA