Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

Click here to switch to the map view.

The map label for this gene is 218884571

Identifier: 218884571

GI number: 218884571

Start: 1178949

End: 1179206

Strand: Direct

Name: 218884571

Synonym: DKAM_1260

Alternate gene names: NA

Gene position: 1178949-1179206 (Clockwise)

Preceding gene: 218884568

Following gene: 218884574

Centisome position: 86.36

GC content: 43.8

Gene sequence:

>258_bases
ATGGAGGTCGAGCTCCATGAGGATGTCGTATCCCAACCCAGGATCAGTGCTAGCATTGATGTCGAGATTACACGGGACAA
GGAGAAATGCCTCGAGAAATACTTCTGCGCTAACGGATATGTTGTCTCTACTAGTAGGATAGGGGATATATATAGGATCG
TTATATCGCTTCACGGGTTACTAGTTGTTATAAAAAGCCCCAGCCAACTGGATTTAAGGCCCATGGATAAAATCTATTTG
GGATTAACGGTTAAGTAG

Upstream 100 bases:

>100_bases
CTACGCCATGGTGTTTAGTGAGAGTTGTACTGTGAATGAAATACAGCAGTTAAGGGTACCGAATACATATCGTTTAAAAC
TAACCTGTAACACGGTCAGT

Downstream 100 bases:

>100_bases
TTTAAATCTTCAAAAATAAGTTTAGTCTTCTTTCTCTTTTTCTTCTTCGCCGGGTTTCTTACCGGTTTCCTCTTTGCCCT
TCTCGAGCTTACTGGCCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MEVELHEDVVSQPRISASIDVEITRDKEKCLEKYFCANGYVVSTSRIGDIYRIVISLHGLLVVIKSPSQLDLRPMDKIYL
GLTVK

Sequences:

>Translated_85_residues
MEVELHEDVVSQPRISASIDVEITRDKEKCLEKYFCANGYVVSTSRIGDIYRIVISLHGLLVVIKSPSQLDLRPMDKIYL
GLTVK
>Mature_85_residues
MEVELHEDVVSQPRISASIDVEITRDKEKCLEKYFCANGYVVSTSRIGDIYRIVISLHGLLVVIKSPSQLDLRPMDKIYL
GLTVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9636; Mature: 9636

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVELHEDVVSQPRISASIDVEITRDKEKCLEKYFCANGYVVSTSRIGDIYRIVISLHGL
CCCCCCCHHHCCCCCCEEEEEEEECCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCE
LVVIKSPSQLDLRPMDKIYLGLTVK
EEEEECCCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MEVELHEDVVSQPRISASIDVEITRDKEKCLEKYFCANGYVVSTSRIGDIYRIVISLHGL
CCCCCCCHHHCCCCCCEEEEEEEECCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCE
LVVIKSPSQLDLRPMDKIYLGLTVK
EEEEECCCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA