Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218884571
Identifier: 218884571
GI number: 218884571
Start: 1178949
End: 1179206
Strand: Direct
Name: 218884571
Synonym: DKAM_1260
Alternate gene names: NA
Gene position: 1178949-1179206 (Clockwise)
Preceding gene: 218884568
Following gene: 218884574
Centisome position: 86.36
GC content: 43.8
Gene sequence:
>258_bases ATGGAGGTCGAGCTCCATGAGGATGTCGTATCCCAACCCAGGATCAGTGCTAGCATTGATGTCGAGATTACACGGGACAA GGAGAAATGCCTCGAGAAATACTTCTGCGCTAACGGATATGTTGTCTCTACTAGTAGGATAGGGGATATATATAGGATCG TTATATCGCTTCACGGGTTACTAGTTGTTATAAAAAGCCCCAGCCAACTGGATTTAAGGCCCATGGATAAAATCTATTTG GGATTAACGGTTAAGTAG
Upstream 100 bases:
>100_bases CTACGCCATGGTGTTTAGTGAGAGTTGTACTGTGAATGAAATACAGCAGTTAAGGGTACCGAATACATATCGTTTAAAAC TAACCTGTAACACGGTCAGT
Downstream 100 bases:
>100_bases TTTAAATCTTCAAAAATAAGTTTAGTCTTCTTTCTCTTTTTCTTCTTCGCCGGGTTTCTTACCGGTTTCCTCTTTGCCCT TCTCGAGCTTACTGGCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MEVELHEDVVSQPRISASIDVEITRDKEKCLEKYFCANGYVVSTSRIGDIYRIVISLHGLLVVIKSPSQLDLRPMDKIYL GLTVK
Sequences:
>Translated_85_residues MEVELHEDVVSQPRISASIDVEITRDKEKCLEKYFCANGYVVSTSRIGDIYRIVISLHGLLVVIKSPSQLDLRPMDKIYL GLTVK >Mature_85_residues MEVELHEDVVSQPRISASIDVEITRDKEKCLEKYFCANGYVVSTSRIGDIYRIVISLHGLLVVIKSPSQLDLRPMDKIYL GLTVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9636; Mature: 9636
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVELHEDVVSQPRISASIDVEITRDKEKCLEKYFCANGYVVSTSRIGDIYRIVISLHGL CCCCCCCHHHCCCCCCEEEEEEEECCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCE LVVIKSPSQLDLRPMDKIYLGLTVK EEEEECCCCCCCCCCCEEEEEEEEC >Mature Secondary Structure MEVELHEDVVSQPRISASIDVEITRDKEKCLEKYFCANGYVVSTSRIGDIYRIVISLHGL CCCCCCCHHHCCCCCCEEEEEEEECCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCE LVVIKSPSQLDLRPMDKIYLGLTVK EEEEECCCCCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA