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The map label for this gene is yejH [C]

Identifier: 218884540

GI number: 218884540

Start: 1148834

End: 1150495

Strand: Direct

Name: yejH [C]

Synonym: DKAM_1229

Alternate gene names: 218884540

Gene position: 1148834-1150495 (Clockwise)

Preceding gene: 218884539

Following gene: 218884544

Centisome position: 84.15

GC content: 47.23

Gene sequence:

>1662_bases
GTGAGTGAATTGGTTTACTTTAAGGTAAAGAGGTGGCTTGAAGAAGATGAGTTTAGAGAGCTACTCAAGATCTCCGATTA
CATCGGGTATAGGGATGGATACCGCTTGTTCTCACTGAACCCCGAGAAGGCGTTAAGGAATAACTATGGCGTTGAAGACG
TGTTAAACCTCCTCAGGGATTTCAACGCCGAACTCGAAGGCCCACTAGAGGATCTAAAGAAGGCTTTCGACGAGTACTCG
CCCCTAATCGAGTGGGATAATGTCAGGGGACATGTGATTCTACATGTACCTAAGACCATATACCCTAGGTTAAAACACAT
CCTCTCCCTAGTAGAGGCTAAACGGAGCTCTGAAACTCCGTCAACCCTGGTCTTCAAGATACTCCCGTTGAATTCTGATT
TACTAGGGAAGAGCCTTAGGAGGCTTGGCATCCCCGTTAAAGACCCCTTAGGGATACTTGCATCTAAAAGTCTCCAAGTC
AAGCCAGAACTGAGGAATATAGCCTTGAGGGATTACCAGAGGGAGGCTCTGAGTAAATGGGTTGAGAACAATTACCGCGG
GATCATCGCCCTGCCCACGGGCTCGGGTAAAACATTAATCGGTGTTGCCGCAATAATTGAAAAGGCTGTCCGTAGTCTTA
TAATAGTATACACTAAGGAGCAGATGGTGCAGTGGAGGAAAGCTATACTAGAGTACACTAGTATACCACAGTCAATGATA
GGCTTGATCTATAGCGAGGAAAAGAAGATCGCGCCGATAACCATAACAACTTATCAAAGCGGCTTTCGCCAGATAAACGA
GATCTCGCCATTCTTCGATTTATTAATAGTCGATGAAGTACACCACCTCCCAGCAGACAAGTTCAAGCATATAGCCGTGC
ATAGTATAGCTGGGTACCGTATGGGGTTATCGGCAACACCGTTTAGGGAGGATGGGAGACACGAAGAGTTGTTCCCATTA
CTCGGGGGTGTTATATACTATAAGACACCCCAGGACCTAGTGGCAATGGGTTACCTCGCACGCTACAGAGTGGAGACTAT
TAAGGTTAAGCTGAGTAGTGAAGAACGAAGACTATATGATGAACTAAGGAGGAAGTACTATAGTCTCGTGAATGGAAAGG
AGTTTAAACAGGTCCTAGAGGAGGCGCGAACCAATGAAAAAGCCAGGGAAGCCCTCAGGGTACATAGCCAGATGAGGAGT
ATACTTGCAAGGGCTAGGGCTAAGATAGAGAAAGCTGTGGAGATAGCTAGAAGGGAGCTGGAGAACGGGAGCAAGGTCAT
AATTTTCACTCAGTATGTGGATCAAGCCAGGGAAATAAGCGAGAGGCTTAACGCATACTTATTAACTGGTGAGGTACCCA
CCAGCGAGAGGAAGCACATACTAGAGGAGTTCAAGGGATCTGAGAAGGGTATACTAGTAGTTACAACCGTAGGTGATGAA
GGACTAGATATACCTGACGCCAACGTAGGTATAATAGTCTCCGGCACCGGTTCGAGACGTCAGTTTATACAGAGGCTTGG
GAGGCTGCTAAGGCCTAAGCCGGGTGGGAAGGAGGCCATCCTGTACGAGATAGTACTTGAGAAGACCAGTGAGGAGTTCC
AGGCTAGAAGAAGGAAGACCACGGGTCTCGACGAGTTATTCGACGCCAAGGACTATGAGTGA

Upstream 100 bases:

>100_bases
AAGACATACGCCCTCGGGGTATTCTATATGACATGCATGGATAAGCCAGTGTTAACGGATTATGAGCCGGTAGAATACGA
GGATATACTAGTGCTTACAG

Downstream 100 bases:

>100_bases
ATCCTTACCATACTTAGTTAGCGAGCTCATTTAATCCCTGGTTAATGCTAGACATCTATTACTGGAGGTAGACCAGCCCC
AGTAATGCCCATTGGATAAG

Product: Putative DNA repair helicase

Products: NA

Alternate protein names: Type III Restriction Res Subunit; DNA Repair Helicase; Helicase Domain-Containing Protein; Helicase Domain Protein; Helicase; ATP-Dependent DNA Helicase; DNA Repair Helicase RAD; Type III Restriction Res Subunit Family; DNA Repair Helicase Rad; DNA Repair Protein Rad; Superfamily II DNA/RNA Helicase; DNA/RNA Helicase; DNA Helicase; ATP-Dependent Helicase; DNA Repair Protein; DNA Repair Protein RAD; DEAD/DEAH Box Helicase Domain-Containing Protein; DNA/RNA Helicase Superfamily II; Helicase-Like Protein; Helicase Protein; DNA Or RNA Helicase Of Superfamily II; DNA/RNA Repair Helicase; DEAD/DEAH Box Helicase; SWF/SNF Family Helicase; DNA-Repair Helicase; Helicase DNA Repair; Helicase DNA Repair Rad; XPB/RAD25-Related Helicase; ATP-Dependet DEAD/DEAH Box Helicase; DEAD/DEAH Box Helicase-Like; DNA-Helicase; Nucleic Acid ATP-Dependent Helicase; DNA Or RNA Helicase Of Superfamily Protein II; Helicase ATP-Dependent; Type III Restriction- System Subunit Res; DNA Or RNA Helicase; RAD25-Type DNA Repair Helicase; DNA Repair Related Protein; Restriction; Restriction Endonuclease Family Protein; Helicase ATP-Dependent Intein-Containing; DNA-Repair Protein

Number of amino acids: Translated: 553; Mature: 552

Protein sequence:

>553_residues
MSELVYFKVKRWLEEDEFRELLKISDYIGYRDGYRLFSLNPEKALRNNYGVEDVLNLLRDFNAELEGPLEDLKKAFDEYS
PLIEWDNVRGHVILHVPKTIYPRLKHILSLVEAKRSSETPSTLVFKILPLNSDLLGKSLRRLGIPVKDPLGILASKSLQV
KPELRNIALRDYQREALSKWVENNYRGIIALPTGSGKTLIGVAAIIEKAVRSLIIVYTKEQMVQWRKAILEYTSIPQSMI
GLIYSEEKKIAPITITTYQSGFRQINEISPFFDLLIVDEVHHLPADKFKHIAVHSIAGYRMGLSATPFREDGRHEELFPL
LGGVIYYKTPQDLVAMGYLARYRVETIKVKLSSEERRLYDELRRKYYSLVNGKEFKQVLEEARTNEKAREALRVHSQMRS
ILARARAKIEKAVEIARRELENGSKVIIFTQYVDQAREISERLNAYLLTGEVPTSERKHILEEFKGSEKGILVVTTVGDE
GLDIPDANVGIIVSGTGSRRQFIQRLGRLLRPKPGGKEAILYEIVLEKTSEEFQARRRKTTGLDELFDAKDYE

Sequences:

>Translated_553_residues
MSELVYFKVKRWLEEDEFRELLKISDYIGYRDGYRLFSLNPEKALRNNYGVEDVLNLLRDFNAELEGPLEDLKKAFDEYS
PLIEWDNVRGHVILHVPKTIYPRLKHILSLVEAKRSSETPSTLVFKILPLNSDLLGKSLRRLGIPVKDPLGILASKSLQV
KPELRNIALRDYQREALSKWVENNYRGIIALPTGSGKTLIGVAAIIEKAVRSLIIVYTKEQMVQWRKAILEYTSIPQSMI
GLIYSEEKKIAPITITTYQSGFRQINEISPFFDLLIVDEVHHLPADKFKHIAVHSIAGYRMGLSATPFREDGRHEELFPL
LGGVIYYKTPQDLVAMGYLARYRVETIKVKLSSEERRLYDELRRKYYSLVNGKEFKQVLEEARTNEKAREALRVHSQMRS
ILARARAKIEKAVEIARRELENGSKVIIFTQYVDQAREISERLNAYLLTGEVPTSERKHILEEFKGSEKGILVVTTVGDE
GLDIPDANVGIIVSGTGSRRQFIQRLGRLLRPKPGGKEAILYEIVLEKTSEEFQARRRKTTGLDELFDAKDYE
>Mature_552_residues
SELVYFKVKRWLEEDEFRELLKISDYIGYRDGYRLFSLNPEKALRNNYGVEDVLNLLRDFNAELEGPLEDLKKAFDEYSP
LIEWDNVRGHVILHVPKTIYPRLKHILSLVEAKRSSETPSTLVFKILPLNSDLLGKSLRRLGIPVKDPLGILASKSLQVK
PELRNIALRDYQREALSKWVENNYRGIIALPTGSGKTLIGVAAIIEKAVRSLIIVYTKEQMVQWRKAILEYTSIPQSMIG
LIYSEEKKIAPITITTYQSGFRQINEISPFFDLLIVDEVHHLPADKFKHIAVHSIAGYRMGLSATPFREDGRHEELFPLL
GGVIYYKTPQDLVAMGYLARYRVETIKVKLSSEERRLYDELRRKYYSLVNGKEFKQVLEEARTNEKAREALRVHSQMRSI
LARARAKIEKAVEIARRELENGSKVIIFTQYVDQAREISERLNAYLLTGEVPTSERKHILEEFKGSEKGILVVTTVGDEG
LDIPDANVGIIVSGTGSRRQFIQRLGRLLRPKPGGKEAILYEIVLEKTSEEFQARRRKTTGLDELFDAKDYE

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4557563, Length=420, Percent_Identity=27.8571428571429, Blast_Score=132, Evalue=8e-31,
Organism=Caenorhabditis elegans, GI17556358, Length=414, Percent_Identity=28.5024154589372, Blast_Score=130, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6322048, Length=412, Percent_Identity=26.2135922330097, Blast_Score=131, Evalue=3e-31,
Organism=Saccharomyces cerevisiae, GI6320539, Length=367, Percent_Identity=23.433242506812, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI221331068, Length=398, Percent_Identity=28.643216080402, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI24662247, Length=398, Percent_Identity=28.643216080402, Blast_Score=137, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63539; Mature: 63408

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELVYFKVKRWLEEDEFRELLKISDYIGYRDGYRLFSLNPEKALRNNYGVEDVLNLLRD
CCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHCCCCHHHHHHHHHH
FNAELEGPLEDLKKAFDEYSPLIEWDNVRGHVILHVPKTIYPRLKHILSLVEAKRSSETP
CCCCCCCCHHHHHHHHHHCCCCEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCC
STLVFKILPLNSDLLGKSLRRLGIPVKDPLGILASKSLQVKPELRNIALRDYQREALSKW
CEEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHCCCCEECHHHHHHHHHHHHHHHHHHH
VENNYRGIIALPTGSGKTLIGVAAIIEKAVRSLIIVYTKEQMVQWRKAILEYTSIPQSMI
HHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHCCCHHHH
GLIYSEEKKIAPITITTYQSGFRQINEISPFFDLLIVDEVHHLPADKFKHIAVHSIAGYR
HHHHCCCCCCCCEEEECCHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
MGLSATPFREDGRHEELFPLLGGVIYYKTPQDLVAMGYLARYRVETIKVKLSSEERRLYD
CCCCCCCCCCCCCCHHHHHHHCCEEEEECHHHHHHHHHHHHHEEEEEEEEECCHHHHHHH
ELRRKYYSLVNGKEFKQVLEEARTNEKAREALRVHSQMRSILARARAKIEKAVEIARREL
HHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENGSKVIIFTQYVDQAREISERLNAYLLTGEVPTSERKHILEEFKGSEKGILVVTTVGDE
CCCCEEEEEHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEEECCC
GLDIPDANVGIIVSGTGSRRQFIQRLGRLLRPKPGGKEAILYEIVLEKTSEEFQARRRKT
CCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
TGLDELFDAKDYE
CCHHHHHCCCCCC
>Mature Secondary Structure 
SELVYFKVKRWLEEDEFRELLKISDYIGYRDGYRLFSLNPEKALRNNYGVEDVLNLLRD
CCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHCCCCHHHHHHHHHH
FNAELEGPLEDLKKAFDEYSPLIEWDNVRGHVILHVPKTIYPRLKHILSLVEAKRSSETP
CCCCCCCCHHHHHHHHHHCCCCEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCC
STLVFKILPLNSDLLGKSLRRLGIPVKDPLGILASKSLQVKPELRNIALRDYQREALSKW
CEEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHCCCCEECHHHHHHHHHHHHHHHHHHH
VENNYRGIIALPTGSGKTLIGVAAIIEKAVRSLIIVYTKEQMVQWRKAILEYTSIPQSMI
HHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHCCCHHHH
GLIYSEEKKIAPITITTYQSGFRQINEISPFFDLLIVDEVHHLPADKFKHIAVHSIAGYR
HHHHCCCCCCCCEEEECCHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
MGLSATPFREDGRHEELFPLLGGVIYYKTPQDLVAMGYLARYRVETIKVKLSSEERRLYD
CCCCCCCCCCCCCCHHHHHHHCCEEEEECHHHHHHHHHHHHHEEEEEEEEECCHHHHHHH
ELRRKYYSLVNGKEFKQVLEEARTNEKAREALRVHSQMRSILARARAKIEKAVEIARREL
HHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENGSKVIIFTQYVDQAREISERLNAYLLTGEVPTSERKHILEEFKGSEKGILVVTTVGDE
CCCCEEEEEHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEEECCC
GLDIPDANVGIIVSGTGSRRQFIQRLGRLLRPKPGGKEAILYEIVLEKTSEEFQARRRKT
CCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
TGLDELFDAKDYE
CCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA