Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884539

Identifier: 218884539

GI number: 218884539

Start: 1148437

End: 1148841

Strand: Direct

Name: 218884539

Synonym: DKAM_1228

Alternate gene names: NA

Gene position: 1148437-1148841 (Clockwise)

Preceding gene: 218884535

Following gene: 218884540

Centisome position: 84.12

GC content: 44.94

Gene sequence:

>405_bases
GTGTTCAAACTAGATGAAAAACTAGCATTGATCACCAGCCTAGAACACCTCTCGAAGATACTAGACGATGCCGTGGCAAT
GGGCTACGAGTACATTAGAACGTGTGGACCATGTGGTGAGAGAAGAATATGTATATACCTACACCTTGAGAATACGGGTG
AAGAAGTAGTGGTCAGGCTTCTCGGGGTCTCAGTGAAACTCGGCTTAGACACAGTTGTAGATGAGTATGTCACCCGTTTA
TTAAACTACTCTAAGGTGGTTAGGAGTCTTGGAGGTGCCGCTGAGTTCTATACTGATAAGACATACGCCCTCGGGGTATT
CTATATGACATGCATGGATAAGCCAGTGTTAACGGATTATGAGCCGGTAGAATACGAGGATATACTAGTGCTTACAGGTG
AGTGA

Upstream 100 bases:

>100_bases
AAAAATAATAATGACTCAATGGGATGAAGAGGGTTTTAAGAGCTGATTAAAGTGATGTAAAACCCACGCGACGACCATTC
ATAGAGGTGGTTAACAACCC

Downstream 100 bases:

>100_bases
ATTGGTTTACTTTAAGGTAAAGAGGTGGCTTGAAGAAGATGAGTTTAGAGAGCTACTCAAGATCTCCGATTACATCGGGT
ATAGGGATGGATACCGCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MFKLDEKLALITSLEHLSKILDDAVAMGYEYIRTCGPCGERRICIYLHLENTGEEVVVRLLGVSVKLGLDTVVDEYVTRL
LNYSKVVRSLGGAAEFYTDKTYALGVFYMTCMDKPVLTDYEPVEYEDILVLTGE

Sequences:

>Translated_134_residues
MFKLDEKLALITSLEHLSKILDDAVAMGYEYIRTCGPCGERRICIYLHLENTGEEVVVRLLGVSVKLGLDTVVDEYVTRL
LNYSKVVRSLGGAAEFYTDKTYALGVFYMTCMDKPVLTDYEPVEYEDILVLTGE
>Mature_134_residues
MFKLDEKLALITSLEHLSKILDDAVAMGYEYIRTCGPCGERRICIYLHLENTGEEVVVRLLGVSVKLGLDTVVDEYVTRL
LNYSKVVRSLGGAAEFYTDKTYALGVFYMTCMDKPVLTDYEPVEYEDILVLTGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15131; Mature: 15131

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKLDEKLALITSLEHLSKILDDAVAMGYEYIRTCGPCGERRICIYLHLENTGEEVVVRL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHH
LGVSVKLGLDTVVDEYVTRLLNYSKVVRSLGGAAEFYTDKTYALGVFYMTCMDKPVLTDY
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCCCCCC
EPVEYEDILVLTGE
CCCCCCCEEEEECC
>Mature Secondary Structure
MFKLDEKLALITSLEHLSKILDDAVAMGYEYIRTCGPCGERRICIYLHLENTGEEVVVRL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHH
LGVSVKLGLDTVVDEYVTRLLNYSKVVRSLGGAAEFYTDKTYALGVFYMTCMDKPVLTDY
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCCCCCC
EPVEYEDILVLTGE
CCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA