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The map label for this gene is dppC [H]

Identifier: 218884176

GI number: 218884176

Start: 830149

End: 831063

Strand: Reverse

Name: dppC [H]

Synonym: DKAM_0865

Alternate gene names: 218884176

Gene position: 831063-830149 (Counterclockwise)

Preceding gene: 218884177

Following gene: 218884174

Centisome position: 60.87

GC content: 45.79

Gene sequence:

>915_bases
ATGACCACGGGTGGAAGCAGTAACAGGTTCGCTACTAGTTTAACAGTATTAGCGAAAGACATGCTATGGGAAATAGTATC
GATCACCAGGAGGAATAGTAGTGTCAAAATAGGTTTAACAATAATACTGGTATACATAGTGTTAACAGCCCTCACACCCT
ATATCACGAGTTATCGACCAGAGGATACTGATCCATCCAGTATATTCCAGCCGCCAAACAGTAAGCACTGGTTTGGAACA
GATGAGATGGGCCGCGACTTATTCACCTTGAATATTTACTCGATAAAGACCTCGCTGATAGTTGGCTTGTCAGCAGCAGC
TATAACAGCCATAATTGGGCTGGTCGTAGGCCTGATCTCAGGCTATTACGGGGGCTTAGTAGATGAGGTGTTAATGCAGG
TCGTGAACTTCCTCTTAACGATACCTTCAATAGTGTTAATGATCGTGATCGGCTCCATTATCGGGTCAAGTATAGCTTCG
GTGATACTGATAATAGGCTTGCTGAACTGGAGCCCTATAGCACGTGTGGTTAGATCAATTGTGTTATCGCTGAAGGAATG
GGCGTATATAGAGGCGGCTAGATCCCTCGGTGCATCTAATTCCTGGATAATAATAAGGCACATCCTTCCAGCAGTAATCC
CTGTGACAATAGCTAATACAGTGCTCTCTGTTTCAACCGCGATATTCTCGCATGCAGCACTAGTGTTCATGGGTGTTGGG
AGTATTGGCGACTGGAACTGGGGGTTAATCCTGTATAACGCATACACCTCAGGAGCGCTTACAGCAGGCATATGGTGGTA
CTTCATACCACCTGGAACCATGCTGGTCGCATTAGCGTACTCCATAATGCTGATAGGAAACGGGCTAGAAAAGGAGTTTA
ACCCAAGGCTCCCGCAAACCAGTTCCCAGCATTAA

Upstream 100 bases:

>100_bases
CGCTTCTCCAAGGAGCCTTCCTCGTAATAGCCGTCTCAGTTGTACTAGCCAACCTCATAGCAGACCTATTATATGGATTG
ATTGATCCAAGGGTGAGAAC

Downstream 100 bases:

>100_bases
AGCAATCACCCCTTCCTAAAATACAGGGTCTGTAACTCAAAATATAAGATCGACGGAAACATCCACGCAGACTTTTAAAC
AGGTGATTAAAGAATACGGG

Product: peptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MTTGGSSNRFATSLTVLAKDMLWEIVSITRRNSSVKIGLTIILVYIVLTALTPYITSYRPEDTDPSSIFQPPNSKHWFGT
DEMGRDLFTLNIYSIKTSLIVGLSAAAITAIIGLVVGLISGYYGGLVDEVLMQVVNFLLTIPSIVLMIVIGSIIGSSIAS
VILIIGLLNWSPIARVVRSIVLSLKEWAYIEAARSLGASNSWIIIRHILPAVIPVTIANTVLSVSTAIFSHAALVFMGVG
SIGDWNWGLILYNAYTSGALTAGIWWYFIPPGTMLVALAYSIMLIGNGLEKEFNPRLPQTSSQH

Sequences:

>Translated_304_residues
MTTGGSSNRFATSLTVLAKDMLWEIVSITRRNSSVKIGLTIILVYIVLTALTPYITSYRPEDTDPSSIFQPPNSKHWFGT
DEMGRDLFTLNIYSIKTSLIVGLSAAAITAIIGLVVGLISGYYGGLVDEVLMQVVNFLLTIPSIVLMIVIGSIIGSSIAS
VILIIGLLNWSPIARVVRSIVLSLKEWAYIEAARSLGASNSWIIIRHILPAVIPVTIANTVLSVSTAIFSHAALVFMGVG
SIGDWNWGLILYNAYTSGALTAGIWWYFIPPGTMLVALAYSIMLIGNGLEKEFNPRLPQTSSQH
>Mature_303_residues
TTGGSSNRFATSLTVLAKDMLWEIVSITRRNSSVKIGLTIILVYIVLTALTPYITSYRPEDTDPSSIFQPPNSKHWFGTD
EMGRDLFTLNIYSIKTSLIVGLSAAAITAIIGLVVGLISGYYGGLVDEVLMQVVNFLLTIPSIVLMIVIGSIIGSSIASV
ILIIGLLNWSPIARVVRSIVLSLKEWAYIEAARSLGASNSWIIIRHILPAVIPVTIANTVLSVSTAIFSHAALVFMGVGS
IGDWNWGLILYNAYTSGALTAGIWWYFIPPGTMLVALAYSIMLIGNGLEKEFNPRLPQTSSQH

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=257, Percent_Identity=30.7392996108949, Blast_Score=148, Evalue=5e-37,
Organism=Escherichia coli, GI1787054, Length=270, Percent_Identity=31.8518518518519, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1787498, Length=293, Percent_Identity=32.4232081911263, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1789889, Length=243, Percent_Identity=29.2181069958848, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1789964, Length=285, Percent_Identity=29.4736842105263, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1788505, Length=170, Percent_Identity=30, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1787549, Length=220, Percent_Identity=28.1818181818182, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32906; Mature: 32775

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTGGSSNRFATSLTVLAKDMLWEIVSITRRNSSVKIGLTIILVYIVLTALTPYITSYRP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHCCCC
EDTDPSSIFQPPNSKHWFGTDEMGRDLFTLNIYSIKTSLIVGLSAAAITAIIGLVVGLIS
CCCCCHHCCCCCCCCCCCCCHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYYGGLVDEVLMQVVNFLLTIPSIVLMIVIGSIIGSSIASVILIIGLLNWSPIARVVRSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VLSLKEWAYIEAARSLGASNSWIIIRHILPAVIPVTIANTVLSVSTAIFSHAALVFMGVG
HHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SIGDWNWGLILYNAYTSGALTAGIWWYFIPPGTMLVALAYSIMLIGNGLEKEFNPRLPQT
CCCCCCCCEEEEECCCCCCCEECEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
SSQH
CCCC
>Mature Secondary Structure 
TTGGSSNRFATSLTVLAKDMLWEIVSITRRNSSVKIGLTIILVYIVLTALTPYITSYRP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHCCCC
EDTDPSSIFQPPNSKHWFGTDEMGRDLFTLNIYSIKTSLIVGLSAAAITAIIGLVVGLIS
CCCCCHHCCCCCCCCCCCCCHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYYGGLVDEVLMQVVNFLLTIPSIVLMIVIGSIIGSSIASVILIIGLLNWSPIARVVRSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VLSLKEWAYIEAARSLGASNSWIIIRHILPAVIPVTIANTVLSVSTAIFSHAALVFMGVG
HHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SIGDWNWGLILYNAYTSGALTAGIWWYFIPPGTMLVALAYSIMLIGNGLEKEFNPRLPQT
CCCCCCCCEEEEECCCCCCCEECEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
SSQH
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]