| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884174
Identifier: 218884174
GI number: 218884174
Start: 828414
End: 828968
Strand: Reverse
Name: 218884174
Synonym: DKAM_0863
Alternate gene names: NA
Gene position: 828968-828414 (Counterclockwise)
Preceding gene: 218884176
Following gene: 218884173
Centisome position: 60.72
GC content: 48.47
Gene sequence:
>555_bases ATGACCTACAGTATTGATGAACTCGCAGGCATTATGAAGACGCTGCAGGACGAAGGGGTTAAGGCTGTCGTAATAGGGGA TACAGTGGTTCAGTTAGCTCTGGGCAGGAAGAGACTAGAAGGTGATGTAGACTTATTCGTGTACGAGCCAAGCCCCCTCC TCGAGCAGGATTACTATCAGGAGCTGGCGTCCAGGCATGGATGGGAGGTATCATCGACGGAAGTGGGCACGGTGAAGTTG ATTGCACCGTTGAGCGAGGACTACCTGGAGATCGAGTTATACGAGAACTATATGGATATAGAGATACCTGATGAAATACT CGAGAAAGCCGATGTGATCAGGGTGGGCGGTATAATCATTAACGTGTTACCGGTGGAAGCCTACCTGGTGCTCAAGGCCC GCCAAGGAGTAGACACGGATAAGCTCGCGGAATACATTAAACGACTGAAGAACAGTATAAATATAAAGCTTGTGGAGGAG CTGATCGGATATTACCATGAAGAGGAGCAAGAGACCATAGTGAACAGGCTTAGAGACACTGGCCTGAATATATAG
Upstream 100 bases:
>100_bases CAAATACCCTTACTTAATTAGTCTGTTGCAGGCTCTAAATTCTTTTTAAATATTTTTGGATGTGTTTTATCTTCTTGGTG TCTTTACCACGGTGGTTTAA
Downstream 100 bases:
>100_bases TCCTGGTACCAGGGAAGATTTTTAAATCACTCAAGGTATTGAGGAGAAGGGTAGAGGGGTGCTTAATATATGCCGGTGAA TAATCCAGAGCTACAGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MTYSIDELAGIMKTLQDEGVKAVVIGDTVVQLALGRKRLEGDVDLFVYEPSPLLEQDYYQELASRHGWEVSSTEVGTVKL IAPLSEDYLEIELYENYMDIEIPDEILEKADVIRVGGIIINVLPVEAYLVLKARQGVDTDKLAEYIKRLKNSINIKLVEE LIGYYHEEEQETIVNRLRDTGLNI
Sequences:
>Translated_184_residues MTYSIDELAGIMKTLQDEGVKAVVIGDTVVQLALGRKRLEGDVDLFVYEPSPLLEQDYYQELASRHGWEVSSTEVGTVKL IAPLSEDYLEIELYENYMDIEIPDEILEKADVIRVGGIIINVLPVEAYLVLKARQGVDTDKLAEYIKRLKNSINIKLVEE LIGYYHEEEQETIVNRLRDTGLNI >Mature_183_residues TYSIDELAGIMKTLQDEGVKAVVIGDTVVQLALGRKRLEGDVDLFVYEPSPLLEQDYYQELASRHGWEVSSTEVGTVKLI APLSEDYLEIELYENYMDIEIPDEILEKADVIRVGGIIINVLPVEAYLVLKARQGVDTDKLAEYIKRLKNSINIKLVEEL IGYYHEEEQETIVNRLRDTGLNI
Specific function: Unknown
COG id: COG4914
COG function: function code R; Predicted nucleotidyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20917; Mature: 20786
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYSIDELAGIMKTLQDEGVKAVVIGDTVVQLALGRKRLEGDVDLFVYEPSPLLEQDYYQ CCCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHH ELASRHGWEVSSTEVGTVKLIAPLSEDYLEIELYENYMDIEIPDEILEKADVIRVGGIII HHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHCEEEECCEEE NVLPVEAYLVLKARQGVDTDKLAEYIKRLKNSINIKLVEELIGYYHEEEQETIVNRLRDT EEECHHHEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHC GLNI CCCC >Mature Secondary Structure TYSIDELAGIMKTLQDEGVKAVVIGDTVVQLALGRKRLEGDVDLFVYEPSPLLEQDYYQ CCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHH ELASRHGWEVSSTEVGTVKLIAPLSEDYLEIELYENYMDIEIPDEILEKADVIRVGGIII HHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHCEEEECCEEE NVLPVEAYLVLKARQGVDTDKLAEYIKRLKNSINIKLVEELIGYYHEEEQETIVNRLRDT EEECHHHEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHC GLNI CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA