Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218883981
Identifier: 218883981
GI number: 218883981
Start: 643082
End: 643747
Strand: Reverse
Name: 218883981
Synonym: DKAM_0670
Alternate gene names: NA
Gene position: 643747-643082 (Counterclockwise)
Preceding gene: 218883982
Following gene: 218883976
Centisome position: 47.15
GC content: 44.59
Gene sequence:
>666_bases GTGCCGGTAAACCTCGGCGACATATTTCCAAACGATACCATTGAAAAGCTCGAGGAATATGTCTCCATATCATCCAAGGT TGCTGAGAGATTCAAGCAGGCTGTAAACCTACTCAACAGATACCAGGTTGGCGATGCCAGGATGGTTCTCACCGAGCTAG TAGAGCTGGAGAATAGAGGTGAAAAACTGAGAAGCGAACTCGAGTACTCCATATCCTCGCTAAGGCTCGAGGCATCATTC ATGAGTGAACTACTAGGTATAGTTTCAAGTATTGACATGATAAGCGATCATATTAAAGAAGTAGCAAAGGAGCTCCGTAT AATCCCCTTCCTGGAAATACCACAGGAATTACGGGCCGGGTTACTCGAGCTAAGCGAGCTGGTTGTAAAAGCTGTTGAAA TATATAACAAGGCTTTTAGAGCTGTTCTCAGAAGCAACTTCGAGGAGGCATTAAGACTACTTGATGAGGTAGTGAAGCTT GAGGAGAAAGCCGATGACATAGAGGTAAGGAACCGTGGCCTTATACTTGAATACGGAGATAGATTCAAGCCTTTGGCGAT GGCAATAATGATTCACAGCTTGAATAAAGCACTTGAAGACACTGCGGACATCTGCGCCCTAAGCGCTACCAGTTTAAAGA TACTTGTAATGGCACGTTTACTCTAG
Upstream 100 bases:
>100_bases TTATAGCATTAAAATCAGATAAACCATAGCTAGTATAAGGAAACCGCGGGCTCAATAATTATAAGTCATTCTCTGGATCA TCATTTATGAGGGAGTAATT
Downstream 100 bases:
>100_bases CCCGGCCACCCTGGAGAAAGCCTCGAATAAAAAGTACTATGCTCCCAAAGGTCTCATGGGATAGACGTCTTGAACTCCTT GAGCAACATGCTTATTCTCC
Product: phosphate transport system-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MPVNLGDIFPNDTIEKLEEYVSISSKVAERFKQAVNLLNRYQVGDARMVLTELVELENRGEKLRSELEYSISSLRLEASF MSELLGIVSSIDMISDHIKEVAKELRIIPFLEIPQELRAGLLELSELVVKAVEIYNKAFRAVLRSNFEEALRLLDEVVKL EEKADDIEVRNRGLILEYGDRFKPLAMAIMIHSLNKALEDTADICALSATSLKILVMARLL
Sequences:
>Translated_221_residues MPVNLGDIFPNDTIEKLEEYVSISSKVAERFKQAVNLLNRYQVGDARMVLTELVELENRGEKLRSELEYSISSLRLEASF MSELLGIVSSIDMISDHIKEVAKELRIIPFLEIPQELRAGLLELSELVVKAVEIYNKAFRAVLRSNFEEALRLLDEVVKL EEKADDIEVRNRGLILEYGDRFKPLAMAIMIHSLNKALEDTADICALSATSLKILVMARLL >Mature_220_residues PVNLGDIFPNDTIEKLEEYVSISSKVAERFKQAVNLLNRYQVGDARMVLTELVELENRGEKLRSELEYSISSLRLEASFM SELLGIVSSIDMISDHIKEVAKELRIIPFLEIPQELRAGLLELSELVVKAVEIYNKAFRAVLRSNFEEALRLLDEVVKLE EKADDIEVRNRGLILEYGDRFKPLAMAIMIHSLNKALEDTADICALSATSLKILVMARLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25065; Mature: 24933
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVNLGDIFPNDTIEKLEEYVSISSKVAERFKQAVNLLNRYQVGDARMVLTELVELENRG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH EKLRSELEYSISSLRLEASFMSELLGIVSSIDMISDHIKEVAKELRIIPFLEIPQELRAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHH LLELSELVVKAVEIYNKAFRAVLRSNFEEALRLLDEVVKLEEKADDIEVRNRGLILEYGD HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC RFKPLAMAIMIHSLNKALEDTADICALSATSLKILVMARLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure PVNLGDIFPNDTIEKLEEYVSISSKVAERFKQAVNLLNRYQVGDARMVLTELVELENRG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH EKLRSELEYSISSLRLEASFMSELLGIVSSIDMISDHIKEVAKELRIIPFLEIPQELRAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHH LLELSELVVKAVEIYNKAFRAVLRSNFEEALRLLDEVVKLEEKADDIEVRNRGLILEYGD HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC RFKPLAMAIMIHSLNKALEDTADICALSATSLKILVMARLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA